Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq406 253 2e-62 seq768 132 4e-26 >seq406 Length=364117 Score = 253 bits (280), Expect = 2e-62 Identities = 984/1521 (65%), Gaps = 49/1521 (3%) Strand=Plus/Minus Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 |||| | |||| || |||||||| |||||||| || | ||| ||||||||| || Sbjct 267898 GTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGT 267839 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | | || | ||| || ||||||| || || ||||| || || || || |||||||| Sbjct 267838 GTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGG 267779 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595 || | || || ||| | || |||| | | || || | || | ||| Sbjct 267778 CGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCA 267719 Query 65596 GTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGAT 65655 || ||||| ||| ||| | | || | ||||| || | || ||| | || | Sbjct 267718 GTCCCACA--GGTCGGTCGGTGTCTTCTCC----CACATGTCGTACTGGAGGATGCCCTT 267665 Query 65656 ACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT 65715 ||| || || || | | | ||||| || ||| ||| |||| ||||| Sbjct 267664 GCTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCT 267605 Query 65716 GGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTC 65775 || ||| || ||||| || ||||||||||| || | || || | || || Sbjct 267604 GGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTC 267545 Query 65776 ATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAAT 65835 ||| ||| |||| | |||||||| || | ||||||||||| || || || || Sbjct 267544 GGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGAT 267485 Query 65836 ACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCT-CAGGTACAGGGTAGTAATTGA 65894 ||||| || | || ||| ||||| ||||||| || | || || ||||||||||||| Sbjct 267484 CCCGATCGGCCTGTGGCGCTTGTTGGA-CGTCTCGGCTTCGGGGACCGGGTAGTAATTGA 267426 Query 65895 TATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGAT-ACGTCG--CAATTGTT 65951 | ||||| || || | || | |||| | | | | ||| | || | | Sbjct 267425 TGTCGATGATCTTGTTGAGGTT---TTTCACGATTACCTTGGTGACGGAGGCCAGCTTCT 267369 Query 65952 CGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAA 66011 ||| || ||| | || || || ||| || ||| ||| ||||| | Sbjct 267368 TGAAGTCGAAA------GTCCGCTCTGGCGTGACGTACATG------TTG---AGGGCGA 267324 Query 66012 GAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGC 66071 || || ||||||||||| || | |||||| ||| ||||| || | || |||| Sbjct 267323 TGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGC 267264 Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 | || || ||||| |||||||||| ||||| || || ||||| | ||||| || | Sbjct 267263 AGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGT 267204 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 ||||||| | |||||| || || ||||| || |||||||| |||||||||| || | Sbjct 267203 CCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACC--A 267146 Query 66192 GAGC-GC-GTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA-ATGTTCGTAGA 66248 |||| || | ||||||||| | | |||| |||| || || || | ||||| Sbjct 267145 GAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGT-GTAGA 267087 Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308 | | ||||| || ||||| ||| ||| | ||||||| | |||||||||| Sbjct 267086 GCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCAGGACACTCGCTGGGACACATCA 267027 Query 66309 GCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 ||||| || | ||| || | ||| || || || || ||||| | ||||| Sbjct 267026 AGGACCAGTCCTGGTTGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGT 266967 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAAC 66427 |||| || || | |||| |||||||| | || ||| || || || || ||||| Sbjct 266966 AGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGAAG 266908 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487 || || | |||| ||||| ||||||||||| ||||| || | || | ||| | Sbjct 266907 TCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTG 266848 Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547 || || ||||||||||||||||| |||||| | || | || |||||| || | ||| Sbjct 266847 CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCG 266788 Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATT 66606 || || ||||| ||||||||| | ||| | ||| ||| | || || | || Sbjct 266787 TTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCC-CGTCGATCGGATGCAGCTCACCGC 266729 Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATAT 66666 || || || || || || | ||| || ||| || || | || || | | || Sbjct 266728 CACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGAT 266669 Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGGGGTTTG 66724 ||| || ||| ||| |||| |||| || ||| |||| || || || || || | Sbjct 266668 GCCTTCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGAC--AGCTGCGGCCGG 266611 Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784 || |||| ||||||||| || | ||||| || || | | |||| | Sbjct 266610 TTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGG 266551 Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCAT 66843 ||||| ||||||||| |||| ||||||| | || || ||||| | | ||| | ||| Sbjct 266550 TTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACAC-CCTCAT 266492 Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC--TTGATATGCATTAAGTAGGAGCGT 66901 || | || || ||||| ||| ||| | ||| ||||| | || | ||||||||| Sbjct 266491 GAGCATGTGCTGCGGCCGCTCGGCCA--CTTTCCCGTTGATCTTCAGCAGGTAGGAGCGC 266434 Query 66902 TCCAGGGTCTTGATACCAAAG 66922 ||||| ||||||| ||| ||| Sbjct 266433 TCCAGAGTCTTGAAACCGAAG 266413 >seq768 Length=308456 Score = 132 bits (146), Expect = 4e-26 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| ||||||||||||| ||| | ||||| | ||||||||||||||||||| Sbjct 127451 TGGAGCGCTTCACGCAGGAGGTGCAGGTGACAGAGGCCAGGTGTTTCTACGGCTTCCAGA 127510 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | |||||||| || ||||||| || Sbjct 127511 TCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTGCTCATCGACACCTACATCAAGG 127570 Query 61376 A 61376 | Sbjct 127571 A 127571 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || || ||||| || ||||| | ||||||||| ||||| | || || |||| |||||| Sbjct 126238 GAAAACCCTCGCCGCTTCGTCATCTTCCCCATCCAGTATCACGACATCTGGCAGATGTAC 126297 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || |||||||||||||| | |||||||| Sbjct 126298 AAGAAGGCAGAGGCTTCCTTCTGGACAGCAGAGGAGGT 126335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397480274757200