Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13]
18,105 sequences; 801,711,499 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq406 253 2e-62
seq768 132 4e-26
>seq406
Length=364117
Score = 253 bits (280), Expect = 2e-62
Identities = 984/1521 (65%), Gaps = 49/1521 (3%)
Strand=Plus/Minus
Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475
|||| | |||| || |||||||| |||||||| || | ||| ||||||||| ||
Sbjct 267898 GTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGT 267839
Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535
| | || | ||| || ||||||| || || ||||| || || || || ||||||||
Sbjct 267838 GTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGG 267779
Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595
|| | || || ||| | || |||| | | || || | || | |||
Sbjct 267778 CGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCA 267719
Query 65596 GTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGAT 65655
|| ||||| ||| ||| | | || | ||||| || | || ||| | || |
Sbjct 267718 GTCCCACA--GGTCGGTCGGTGTCTTCTCC----CACATGTCGTACTGGAGGATGCCCTT 267665
Query 65656 ACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT 65715
||| || || || | | | ||||| || ||| ||| |||| |||||
Sbjct 267664 GCTGATGGGCGAGCCCTCGTACGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCT 267605
Query 65716 GGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTC 65775
|| ||| || ||||| || ||||||||||| || | || || | || ||
Sbjct 267604 GGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTC 267545
Query 65776 ATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAAT 65835
||| ||| |||| | |||||||| || | ||||||||||| || || || ||
Sbjct 267544 GGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGAT 267485
Query 65836 ACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCT-CAGGTACAGGGTAGTAATTGA 65894
||||| || | || ||| ||||| ||||||| || | || || |||||||||||||
Sbjct 267484 CCCGATCGGCCTGTGGCGCTTGTTGGA-CGTCTCGGCTTCGGGGACCGGGTAGTAATTGA 267426
Query 65895 TATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGAT-ACGTCG--CAATTGTT 65951
| ||||| || || | || | |||| | | | | ||| | || | |
Sbjct 267425 TGTCGATGATCTTGTTGAGGTT---TTTCACGATTACCTTGGTGACGGAGGCCAGCTTCT 267369
Query 65952 CGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAA 66011
||| || ||| | || || || ||| || ||| ||| ||||| |
Sbjct 267368 TGAAGTCGAAA------GTCCGCTCTGGCGTGACGTACATG------TTG---AGGGCGA 267324
Query 66012 GAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGC 66071
|| || ||||||||||| || | |||||| ||| ||||| || | || ||||
Sbjct 267323 TGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGC 267264
Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131
| || || ||||| |||||||||| ||||| || || ||||| | ||||| || |
Sbjct 267263 AGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGT 267204
Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191
||||||| | |||||| || || ||||| || |||||||| |||||||||| || |
Sbjct 267203 CCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACC--A 267146
Query 66192 GAGC-GC-GTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTA-ATGTTCGTAGA 66248
|||| || | ||||||||| | | |||| |||| || || || | |||||
Sbjct 267145 GAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGT-GTAGA 267087
Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308
| | ||||| || ||||| ||| ||| | ||||||| | ||||||||||
Sbjct 267086 GCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCAGGACACTCGCTGGGACACATCA 267027
Query 66309 GCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368
||||| || | ||| || | ||| || || || || ||||| | |||||
Sbjct 267026 AGGACCAGTCCTGGTTGCTTTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGCGT 266967
Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAAC 66427
|||| || || | |||| |||||||| | || ||| || || || || |||||
Sbjct 266966 AGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGAAG 266908
Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCG 66487
|| || | |||| ||||| ||||||||||| ||||| || | || | ||| |
Sbjct 266907 TCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCAAAGGCCCCGGGTCTCTTGTTG 266848
Query 66488 CCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCG 66547
|| || ||||||||||||||||| |||||| | || | || |||||| || | |||
Sbjct 266847 CCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATCCG 266788
Query 66548 TTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATT 66606
|| || ||||| ||||||||| | ||| | ||| ||| | || || | ||
Sbjct 266787 TTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCC-CGTCGATCGGATGCAGCTCACCGC 266729
Query 66607 CAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATAT 66666
|| || || || || || | ||| || ||| || || | || || | | ||
Sbjct 266728 CACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAGAT 266669
Query 66667 GCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGGGGTTTG 66724
||| || ||| ||| |||| |||| || ||| |||| || || || || || |
Sbjct 266668 GCCTTCGATGCTGTCGTCCTTCATGGCAAGCAGGAAGCAGCTGGAC--AGCTGCGGCCGG 266611
Query 66725 GGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAA 66784
|| |||| ||||||||| || | ||||| || || | | |||| |
Sbjct 266610 TTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGAGG 266551
Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCAT 66843
||||| ||||||||| |||| ||||||| | || || ||||| | | ||| | |||
Sbjct 266550 TTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACAC-CCTCAT 266492
Query 66844 CAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC--TTGATATGCATTAAGTAGGAGCGT 66901
|| | || || ||||| ||| ||| | ||| ||||| | || | |||||||||
Sbjct 266491 GAGCATGTGCTGCGGCCGCTCGGCCA--CTTTCCCGTTGATCTTCAGCAGGTAGGAGCGC 266434
Query 66902 TCCAGGGTCTTGATACCAAAG 66922
||||| ||||||| ||| |||
Sbjct 266433 TCCAGAGTCTTGAAACCGAAG 266413
>seq768
Length=308456
Score = 132 bits (146), Expect = 4e-26
Identities = 102/121 (84%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| ||||||||||||| ||| | ||||| | |||||||||||||||||||
Sbjct 127451 TGGAGCGCTTCACGCAGGAGGTGCAGGTGACAGAGGCCAGGTGTTTCTACGGCTTCCAGA 127510
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375
| ||||||||||| ||||||| ||||||||||| | |||||||| || ||||||| ||
Sbjct 127511 TCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTGCTCATCGACACCTACATCAAGG 127570
Query 61376 A 61376
|
Sbjct 127571 A 127571
Score = 87.8 bits (96), Expect = 1e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
|| || ||||| || ||||| | ||||||||| ||||| | || || |||| ||||||
Sbjct 126238 GAAAACCCTCGCCGCTTCGTCATCTTCCCCATCCAGTATCACGACATCTGGCAGATGTAC 126297
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
|| ||||| || |||||||||||||| | ||||||||
Sbjct 126298 AAGAAGGCAGAGGCTTCCTTCTGGACAGCAGAGGAGGT 126335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397480274757200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |