Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= NC_033168.1 Length=11270 Score E Sequences producing significant alignments: (Bits) Value seq459 140 2e-29 >seq459 Length=350214 Score = 140 bits (154), Expect = 2e-29 Identities = 252/365 (69%), Gaps = 9/365 (2%) Strand=Plus/Plus Query 1856 TATAAGGGGTGGAAAGTGCTTTATGTTAATTTCGATGTTTCAGGGTGGTGTTCTAATTTC 1915 |||| || |||| |||| | || |||| ||| |||| || || |||||| || || Sbjct 342328 TATACCGGCTGGAGAGTGTTGTACATTAACTTCAATGTGTCGGGTTGGTGTGGCAACTTT 342387 Query 1916 AGACATGAAACTGTTCATCCCATAGCCCATGACATTTTGGATAAA-TATTATCAGACTGG 1974 |||||||| || || | |||||||| || ||| || | || ||| |||| | || Sbjct 342388 AGACATGAGACAGTAGAGCCCATAGCACACGACGTTCTAGACAAAGTATTCGGA-ACATC 342446 Query 1975 AGAtttttttGGAAAAACACAATTGGCATACGAACATGGGCTATTCTATATCCCTAAACA 2034 |||| |||| || || ||| |||| ||| | ||| | |||||| | ||| | | Sbjct 342447 TCATTTCTTTGACAAGACTCAAAAAGCATTCGAGAAAGGGTTCTTCTATCTACCTGACCG 342506 Query 2035 AGATGGATCAGGTGCTTACCACTGGGAAGGGCAGTTAGGGGGAGTGGAGGGGCTGAATCA 2094 || || || |||||||||||| |||||| || ||| | |||||| |||| || Sbjct 342507 GGAGGG------TGTTTACCACTGGGAGGGGCAGGATGGAGGAATAGAGGGGTTGAACCA 342560 Query 2095 AGATACATGGATGATGGTATACATACCACAGATGAGGTTAGCTCTACATGAAT-TTCAAG 2153 | || ||||||| || |||||||| |||||| | | ||||||| || | ||| Sbjct 342561 GTACACTTGGATGACCGTCTACATACCCCAGATGCAGCTGGCTCTACGGGAGTAATCAGT 342620 Query 2154 CACACATGTTTGTAATGGCTTATGGAGACGATTATAAGGCCGCTTTATTAATTCCGCCCG 2213 || | || |||||| |||||| || ||||||||||| || || | || || || | Sbjct 342621 TGCAATTCTTCGTAATGTGTTATGGGGATGATTATAAGGCGGCAATACTCATCCCACCGG 342680 Query 2214 ATCAG 2218 ||||| Sbjct 342681 ATCAG 342685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35941477903480