Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq22 132 9e-29 seq19 86.0 1e-14 >seq22 Length=25248790 Score = 132 bits (146), Expect = 9e-29 Identities = 193/267 (72%), Gaps = 13/267 (5%) Strand=Plus/Minus Query 56 TGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG---CCTTT 112 |||||||| | | | | |||||||||||||||||||||||||||||| ||| || | Sbjct 4098629 TGCCGGGGCTCGAAG-CGTTTACTTTGAAAAAATTAGAGTGTTCAAAGTAGGCCCCCGTC 4098571 Query 113 GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTT 171 | |||||| ||| |||||||| ||||||||| | |||||||||||||| || ||| Sbjct 4098570 GTCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTT 4098512 Query 172 CT------AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTG 225 || | || | | |||||||| ||||| | |||||| | ||||| | Sbjct 4098511 CTTCTTTCTGAACTGAAGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCG 4098452 Query 226 TCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGA 285 |||||||||||||||||| | ||| | | |||||||| | ||||| | Sbjct 4098451 CTAGAGGTGAAATTCTTGGACCGGCGCAGGACGGAGGAAAGCGAAAGCATATGCCAAGAA 4098392 Query 286 TGTTTTCATTAATCAGTGAACGAAAGT 312 ||||||||||||||| |||||||||| Sbjct 4098391 TGTTTTCATTAATCA-AGAACGAAAGT 4098366 >seq19 Length=28470737 Score = 86.0 bits (94), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 9/140 (6%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGT---GCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGT 95 |||| ||| ||| |||| ||||||| | | | | ||||||||||||||||| |||| Sbjct 25150032 ATGCTCTTAGCTGAGTGTCTTGCCGGGGCTCGAAG-CGTTTACTTTGAAAAAATTTGAGT 25149974 Query 96 GTTCAAAGCAGG----CCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTG 151 |||||||||||| || | || |||||| ||| |||||| | |||||||| Sbjct 25149973 GTTCAAAGCAGGTCCCCCGTCGCCTGAATACCACAGCTAGGAATAGTGAAATAGGAC-CC 25149915 Query 152 CGGTTCTATTTTGTTGGTTT 171 ||||| |||||||| ||||| Sbjct 25149914 CGGTTTTATTTTGTGGGTTT 25149895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915174667264