Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6 132 2e-28 seq4 129 2e-27 >seq6 Length=31529174 Score = 132 bits (146), Expect = 2e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 12684397 GGACCTGAAAGATGGTGAACTATGCCTGGRCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 12684456 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| || || ||| ||| |||||||||| ||||| | ||| ||||||||||| Sbjct 12684457 GGCCCGTAGTGGTCCTGATGTGCAAATCGGTCGTCCGACCTGGATATAGGGGCGA 12684511 >seq4 Length=31497199 Score = 129 bits (142), Expect = 2e-27 Identities = 85/95 (89%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 11455172 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 11455231 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||| || ||||| ||| ||||||||||| ||||| Sbjct 11455232 GGCCCGTRGCGGTCCTGACGTGCAAATCGGTCGTC 11455266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079940626400