Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 5e-14 seq3 77.0 2e-12 >seq2 Length=46286544 Score = 82.4 bits (90), Expect = 5e-14 Identities = 63/71 (89%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 41517466 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 41517409 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 41517408 TAAT-CAACGC 41517399 >seq3 Length=35265442 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| |||||||||||||||| || Sbjct 14976004 CTCACTAAACCATG-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGAACT 14975947 Query 109 TAATACAACGCAAGCT 124 |||| ||| || |||| Sbjct 14975946 TAAT-CAATGCGAGCT 14975932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300792194240