Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20reticulata_20[refseq_20GCF_5F000633615.1_202014-04-28] 2,768 sequences; 731,622,281 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq8 387 4e-105 seq862 349 1e-93 seq5 297 6e-78 seq17 271 2e-70 seq18 181 3e-43 seq3 167 8e-39 seq12 159 1e-36 seq1269 154 5e-35 seq14 152 2e-34 seq9 116 1e-23 seq16 102 3e-19 seq1919 77.0 1e-11 >seq8 Length=27946405 Score = 387 bits (428), Expect = 4e-105 Identities = 352/440 (80%), Gaps = 16/440 (4%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||| Sbjct 1934 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTGCC 1993 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 1994 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 2053 Query 127 G------GCCCGCGAAGGAC-CTTAACGCCAGAA---AATGGTCGGTGAAGACCAGTTCC 176 || |||| || | ||| | ||||||| | | | | || | | | Sbjct 2054 ACGCCCCGCACGCGCGGGGCGCTTGAYGCCAGAACCGAGAGCCCACTACAGGCTCGCCCT 2113 Query 177 GCT---TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAA 232 || ||| | ||||| ||||||| ||||| | ||||||||||||| ||| ||||| Sbjct 2114 CCTACCTCACCGGGTAAGTGAAAAAACAATAAGAGCAGTGGTATTTCACCGGCGGCCGAA 2173 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||| ||| |||||||||||| ||| ||||||| | | |||||||||||||| Sbjct 2174 GC--CTCCCACGTATCCTACACCTCTCATGTCTCTTCACAATGCCAGACTAGAGTCAAGC 2231 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2232 TCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 2291 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 || ||| | || |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2292 CTGGATGGGAGTTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTA 2351 Query 413 GATGACGAGGCATTTGGCTA 432 |||||||||||||||||||| Sbjct 2352 GATGACGAGGCATTTGGCTA 2371 >seq862 Length=4351 Score = 349 bits (386), Expect = 1e-93 Identities = 240/269 (89%), Gaps = 4/269 (1%) Strand=Plus/Plus Query 197 aaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTCCCACTTATTCTACACC 255 |||||||||| | ||||||||||||| ||| ||||| | ||||||||||| ||||||| Sbjct 1 AAACGATAAGAGCAGTGGTATTTCACCGGCGGCCGAAGC--CTCCCACTTATCCTACACC 58 Query 256 TCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 315 ||||| ||| ||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 59 TCTCATGTCTCTTCACAATGCCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGC 118 Query 316 TGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTG 375 |||||| ||||||||||||||||||||||||| |||||| ||| | || ||||||||||| Sbjct 119 TGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGKTTCGCTGGATGGGAGTTAGGGACAGTG 178 Query 376 GGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCT 435 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 179 GGAATCTCGKTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTATTT 238 Query 436 TAAGAGAGTCATAGTTACTC-CCGCCGTT 463 |||| ||||| ||||||||| ||||||| Sbjct 239 TAAGGGAGTCCTAGTTACTCATCGCCGTT 267 >seq5 Length=33908744 Score = 297 bits (328), Expect = 6e-78 Identities = 190/207 (92%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 227 GCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAG 286 |||||| | ||||||||||| |||||||||||| ||| ||||||| | | |||||||| Sbjct 33383564 GCCGAAGC--CTCCCACTTATCCTACACCTCTCATGTCTCTTCACAATGCCAGACTAGAG 33383507 Query 287 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 33383506 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTG 33383447 Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406 |||||||| ||| | | |||||||||||||||||||||| ||||||||||||||||||| Sbjct 33383446 GTTTCGCTGGATGGGRGTTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCAC 33383387 Query 407 TAATTAGATGACGAGGCATTTGGCTAC 433 ||||||||||||||||||||||||||| Sbjct 33383386 TAATTAGATGACGAGGCATTTGGCTAC 33383360 Score = 159 bits (176), Expect = 1e-36 Identities = 93/96 (97%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 33379136 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACT 33379077 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 |||||||||||||||||||||||||||||||| ||| Sbjct 33379076 TTGACATTCAGAGCACTGGGCAGAAATCACATCGCG 33379041 >seq17 Length=30788009 Score = 271 bits (300), Expect = 2e-70 Identities = 159/165 (96%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 4562943 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGT 4562884 Query 346 GGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCA 405 ||||||||| ||| | || |||||||||||||||||||||| |||||||||||||||||| Sbjct 4562883 GGTTTCGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCA 4562824 Query 406 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4562823 CTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 4562779 >seq18 Length=22026651 Score = 181 bits (200), Expect = 3e-43 Identities = 111/118 (94%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 19307066 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGCCT 19307007 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401 ||||||||||| ||| | || |||||||||||||||||||||| |||||||||||||| Sbjct 19307006 GTGGTTTCGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGC 19306949 Score = 80.6 bits (88), Expect = 9e-13 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 6295323 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 6295382 Query 67 GTTTAACAGATGTGCCGCC 85 |||| |||| ||| ||||| Sbjct 6295383 GTTTGACAGGTGTACCGCC 6295401 >seq3 Length=35265442 Score = 167 bits (184), Expect = 8e-39 Identities = 101/107 (94%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 24809815 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCT 24809756 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATC 390 ||||||||||| ||| | || |||||||||||||||||||||| ||| Sbjct 24809755 GTGGTTTCGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGTTCATC 24809709 >seq12 Length=26439574 Score = 159 bits (176), Expect = 1e-36 Identities = 97/103 (94%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 111771 GAGTCAAGCTCAACAGGGTCTTCTTTCCACGCTGATTCTGCCAAGCCCGTTCCCTTGGCT 111712 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 ||||||||||| ||| | || |||||||||||||||||||||| Sbjct 111711 GTGGTTTCGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGTT 111669 >seq1269 Length=2672 Score = 154 bits (170), Expect = 5e-35 Identities = 90/93 (97%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2580 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTG 2639 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 ||||||||||||||||||||||||||||| ||| Sbjct 2640 ACATTCAGAGCACTGGGCAGAAATCACATCGCG 2672 >seq14 Length=28338960 Score = 152 bits (168), Expect = 2e-34 Identities = 90/94 (96%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 15844757 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATT 15844816 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||| |||||| || Sbjct 15844817 CAGAGCACTGGGCAGAAATCACATCGCGTCATCA 15844850 >seq9 Length=34117797 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 9513235 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 9513176 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||||||||| ||||||||||||||| || |||| Sbjct 9513175 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC 9513129 Score = 91.5 bits (100), Expect = 5e-16 Identities = 53/55 (96%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGC 342 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 33283184 CAAGCTCAACAGGGTCTTCTTGCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGC 33283130 >seq16 Length=33199742 Score = 102 bits (112), Expect = 3e-19 Identities = 59/61 (97%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGT 345 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 31475828 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATACTGCCAAGCCCGTTCCCTTGGCTGT 31475769 Query 346 G 346 | Sbjct 31475768 G 31475768 >seq1919 Length=1546 Score = 77.0 bits (84), Expect = 1e-11 Identities = 42/42 (100%), Gaps = 0/42 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||||||||||||||||||||||||||| Sbjct 45 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635154737664