Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq462698 91.5 3e-16 seq388443 91.5 3e-16 seq12756 91.5 3e-16 seq156888 73.4 8e-11 >seq462698 Length=334 Score = 91.5 bits (100), Expect = 3e-16 Identities = 134/186 (72%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 146 CTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGT 205 |||||||||||| ||||| | ||| || |||| || | |||| | || ||||| Sbjct 20 CTATTCCGTCAGTTCGCGGCACTTTCATCACTCCGTCACCCCATCACAGTTAACAGTAGT 79 Query 206 AACGGAATACTAACCGTTTCTGCCATCGG-TCTCGCCGTTCGGCTGAACCTTATGACCCG 264 | |||||| ||||| || | |||||| | || || ||||| | ||||| | |||| Sbjct 80 ACGGGAATATTAACCCGTTGT-CCATCGACTGTC-CCTTTCGGGTTCGCCTTAGGTCCCG 137 Query 265 ACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTC 324 ||| |||| | | ||||||| | | ||||||||||||||||||| | | ||||||| Sbjct 138 ACTAACCCACAGCTGATTAGCATAGCTGTGGAAACCTTAGTCTTTCGGTGTGCGGGTTTC 197 Query 325 CCACCC 330 | ||| Sbjct 198 TCGCCC 203 >seq388443 Length=855 Score = 91.5 bits (100), Expect = 3e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 101 CCGTGGATTTGCCTGCGGAAATCAACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCG 160 |||||||||||||||||| | | | || ||| ||| |||||||||||| Sbjct 497 CCGTGGATTTGCCTGCGGGCCTTATAGG-TAGGTACTTCAACGAACTATTCCGTCAGTTC 555 Query 161 GCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACC 220 |||||| | ||| || |||| || | |||| | | | |||| |||||| ||||| Sbjct 556 GCGGCGCTTTCATCACTCCGTCACCCCATCACAGTTATAACAAGTACGGGAATATTAACC 615 Query 221 GTTTCTGCCATCGG-TCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCG 279 || | |||||| | || || ||||| | ||||| | ||||||| |||| | | | Sbjct 616 CGTTGT-CCATCGACTGTC-CCTTTCGGGTTCGCCTTAGGTCCCGACTAACCCACAGCTG 673 Query 280 ATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACCC 330 |||||| | | ||||||||||||||||||| | | ||||||| | ||| Sbjct 674 ATTAGCATAGCTGTGGAAACCTTAGTCTTTCGGTGTGCGGGTTTCTCGCCC 724 >seq12756 Length=1019 Score = 91.5 bits (100), Expect = 3e-16 Identities = 100/131 (76%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 203 AGTAACGGAATACTAACC-GTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGAC 261 |||| |||||| ||||| ||||| |||||| |||| |||||| ||||| || Sbjct 508 AGTACTGGAATATTAACCAGTTTC--CCATCGACTACGCCTTTCGGCCTCGCCTTAGGAG 451 Query 262 CCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGT 321 ||||| |||||| ||||||| || || |||||| |||| ||||||||||| || ||| Sbjct 450 TCGACTCACCCTGCCCCGATTAACGTTGGACAGGAACCCTTGGTCTTTCGGCGTGGAGGT 391 Query 322 TTCCCACCCCC 332 || ||||||| Sbjct 390 TTTTCACCCCC 380 >seq156888 Length=1118 Score = 73.4 bits (80), Expect = 8e-11 Identities = 95/130 (73%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 203 AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACC 262 |||| |||||| ||||| || | |||||| ||| ||| || ||||| | | Sbjct 154 AGTACAGGAATATTAACCTGTTTT-CCATCGACTACGCTTTTCAGCCTCGCCTTAGGGAC 96 Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322 ||||| |||||| |||||| || || ||||||||||| ||||||||||| ||| ||| Sbjct 95 CGACTAACCCTGCGTCGATTAACGTTGCGCAGGAAACCTTGGTCTTTCGGCGTGGGTGTT 36 Query 323 TCCCACCCCC 332 | ||| ||| Sbjct 35 TTTCACACCC 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 954955180800