Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01000056.1
Length=332
Score E
Sequences producing significant alignments: (Bits) Value
seq462698 91.5 3e-16
seq388443 91.5 3e-16
seq12756 91.5 3e-16
seq156888 73.4 8e-11
>seq462698
Length=334
Score = 91.5 bits (100), Expect = 3e-16
Identities = 134/186 (72%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 146 CTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGT 205
|||||||||||| ||||| | ||| || |||| || | |||| | || |||||
Sbjct 20 CTATTCCGTCAGTTCGCGGCACTTTCATCACTCCGTCACCCCATCACAGTTAACAGTAGT 79
Query 206 AACGGAATACTAACCGTTTCTGCCATCGG-TCTCGCCGTTCGGCTGAACCTTATGACCCG 264
| |||||| ||||| || | |||||| | || || ||||| | ||||| | ||||
Sbjct 80 ACGGGAATATTAACCCGTTGT-CCATCGACTGTC-CCTTTCGGGTTCGCCTTAGGTCCCG 137
Query 265 ACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTC 324
||| |||| | | ||||||| | | ||||||||||||||||||| | | |||||||
Sbjct 138 ACTAACCCACAGCTGATTAGCATAGCTGTGGAAACCTTAGTCTTTCGGTGTGCGGGTTTC 197
Query 325 CCACCC 330
| |||
Sbjct 198 TCGCCC 203
>seq388443
Length=855
Score = 91.5 bits (100), Expect = 3e-16
Identities = 162/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 101 CCGTGGATTTGCCTGCGGAAATCAACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCG 160
|||||||||||||||||| | | | || ||| ||| ||||||||||||
Sbjct 497 CCGTGGATTTGCCTGCGGGCCTTATAGG-TAGGTACTTCAACGAACTATTCCGTCAGTTC 555
Query 161 GCGGCGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACC 220
|||||| | ||| || |||| || | |||| | | | |||| |||||| |||||
Sbjct 556 GCGGCGCTTTCATCACTCCGTCACCCCATCACAGTTATAACAAGTACGGGAATATTAACC 615
Query 221 GTTTCTGCCATCGG-TCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCG 279
|| | |||||| | || || ||||| | ||||| | ||||||| |||| | | |
Sbjct 616 CGTTGT-CCATCGACTGTC-CCTTTCGGGTTCGCCTTAGGTCCCGACTAACCCACAGCTG 673
Query 280 ATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACCC 330
|||||| | | ||||||||||||||||||| | | ||||||| | |||
Sbjct 674 ATTAGCATAGCTGTGGAAACCTTAGTCTTTCGGTGTGCGGGTTTCTCGCCC 724
>seq12756
Length=1019
Score = 91.5 bits (100), Expect = 3e-16
Identities = 100/131 (76%), Gaps = 3/131 (2%)
Strand=Plus/Minus
Query 203 AGTAACGGAATACTAACC-GTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGAC 261
|||| |||||| ||||| ||||| |||||| |||| |||||| ||||| ||
Sbjct 508 AGTACTGGAATATTAACCAGTTTC--CCATCGACTACGCCTTTCGGCCTCGCCTTAGGAG 451
Query 262 CCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGT 321
||||| |||||| ||||||| || || |||||| |||| ||||||||||| || |||
Sbjct 450 TCGACTCACCCTGCCCCGATTAACGTTGGACAGGAACCCTTGGTCTTTCGGCGTGGAGGT 391
Query 322 TTCCCACCCCC 332
|| |||||||
Sbjct 390 TTTTCACCCCC 380
>seq156888
Length=1118
Score = 73.4 bits (80), Expect = 8e-11
Identities = 95/130 (73%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 203 AGTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACC 262
|||| |||||| ||||| || | |||||| ||| ||| || ||||| | |
Sbjct 154 AGTACAGGAATATTAACCTGTTTT-CCATCGACTACGCTTTTCAGCCTCGCCTTAGGGAC 96
Query 263 CGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTT 322
||||| |||||| |||||| || || ||||||||||| ||||||||||| ||| |||
Sbjct 95 CGACTAACCCTGCGTCGATTAACGTTGCGCAGGAAACCTTGGTCTTTCGGCGTGGGTGTT 36
Query 323 TCCCACCCCC 332
| ||| |||
Sbjct 35 TTTCACACCC 26
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 954955180800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |