Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq392608 268 2e-69 seq337199 149 1e-33 seq337200 147 4e-33 seq362979 109 1e-21 seq257960 102 2e-19 >seq392608 Length=818 Score = 268 bits (296), Expect = 2e-69 Identities = 257/324 (79%), Gaps = 4/324 (1%) Strand=Plus/Plus Query 14 GGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTG 73 || |||||||||| |||||| || ||| ||||||||||||||||| | | |||| Sbjct 139 GGAGTGAAATAGATCCTGAAACCATACGCTTACAAGCGGTCGGAGCCCTTTAGTGGGGTG 198 Query 74 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCT 133 ||||||||||||||||||||||||||||||||||| ||| | || ||| |||| | | Sbjct 199 ACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA-ACGTTGCTGGCAAGGATAAGTGGT 257 Query 134 TCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCG-ACGAGTTGGTGGCGCTA 192 | || | || | ||| || ||||||||| || || |||||| ||| || | | || Sbjct 258 TAAGCCACG-GATCCGTAGCGAAAGCGAGTCTGAATAGGGCGCTTTAGTCAGTAGTGTTA 316 Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAG 252 ||||||||||| ||||||||||||| | |||||||||| |||||| | ||||| Sbjct 317 GACGCGAAACCGTGTGATCTACCCATGGACAGGTTGAAGCTTTGGTAACACAAAGTGGAG 376 Query 253 GACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCA 312 ||||||||| || |||||||||||| || |||||| | ||||||||||||||||||| Sbjct 377 GACCGAACC-GTTGACGTTGAAAAGTCTTGGGATGATCTGTGGGTAGGGGTGAAAGGCCA 435 Query 313 ATCAAACTGGGAAATAGCTCGTAC 336 |||||||| ||||||||||||||| Sbjct 436 ATCAAACTCGGAAATAGCTCGTAC 459 >seq337199 Length=308 Score = 149 bits (164), Expect = 1e-33 Identities = 163/217 (75%), Gaps = 5/217 (2%) Strand=Plus/Minus Query 118 AGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 ||||||||||| | || || |||||| || |||| |||| |||||| |||||| Sbjct 280 AGCGAGGTTAACCGATTAGGG-----TAGCCGTAGGGAAACCGAGTCTTAACTGGGCGAA 226 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 ||||| | ||||| ||||||| |||||||| ||| ||||||||||||| | Sbjct 225 TAGTTGCAAGGTATAGACCCGAAACCCGGTGATCTAGCCATGAGCAGGTTGAAGGTTGAG 166 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 |||| |||||||||||||| |||||||||||||| |||||||| | || | Sbjct 165 TAACATCAACTGGAGGACCGAACCCACTAACGTTGAAAAGTTAGGGGATGACTTGTGGTT 106 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||| ||||||||| |||||||| |||| |||||| || Sbjct 105 AGGAGTGAAAGGCTAATCAAACCGGGAGATAGCTGGT 69 >seq337200 Length=248 Score = 147 bits (162), Expect = 4e-33 Identities = 141/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 154 GAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTA 213 |||| |||| |||||| |||||| ||||| ||| ||||| |||||||| |||||||| Sbjct 246 GAAACCGAGTCTTAACTGGGCGAATAGTTGCTGGGATTAGACCCGAAACCTGGTGATCTA 187 Query 214 CCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGA 273 ||| | ||||||||||| ||||| ||||||||||||||| || ||||| Sbjct 186 GCCATGGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCGACTAATGTTGA 127 Query 274 AAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCG 333 ||| || ||||||||| | || | ||||||||||||||||||||| ||| |||||| | Sbjct 126 AAAATTAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCCGGAGATAGCTGG 67 Query 334 T 334 | Sbjct 66 T 66 >seq362979 Length=304 Score = 109 bits (120), Expect = 1e-21 Identities = 138/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 145 AGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGACGCGAAACCT 204 ||||| || ||||||||| ||||| |||||| ||||| || ||||| ||||||| Sbjct 255 AGCCGTAGCGAAAGCGAGTCTTAATAGGGCGTTTAGTTGCAGGGTATAGACCCGAAACCG 196 Query 205 TGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGACCGAACCGGT 264 | |||||| ||| | ||||||||||| ||||| ||||||||||||| Sbjct 195 GGCGATCTATCCATGGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACACAC 136 Query 265 AAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGA 324 | |||||||| | ||||||| | |||| || ||||||||| |||||| | |||| Sbjct 135 GTATGTTGAAAAATGCGGTGATGACTTGTGGGTCGGAGTGAAAGGCTAATCAAGCCGGGA 76 Query 325 AATAGCTCGT 334 |||||| || Sbjct 75 GATAGCTGGT 66 >seq257960 Length=1007 Score = 102 bits (112), Expect = 2e-19 Identities = 180/257 (70%), Gaps = 14/257 (5%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG--TGATT 68 ||||| |||||||||| |||||| ||| | ||||||| || ||||| | ||| Sbjct 757 AGGGGAGTGAAATAGAACCTGAAACCGTATACGTACAAGCAGTGGGAGCGGTTCTTGAGA 816 Query 69 CGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAG---TCGTCACCAGCGAGGT 125 | ||||| |||| ||||||| |||||| | | ||| ||| | || |||||||| Sbjct 817 CCGTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACATTTTGT----AGCGAGGT 872 Query 126 TAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGT 185 |||| | | || || ||||| || |||| |||| ||||| | ||| ||||| Sbjct 873 TAAGCGAAT-AG---CGG-AGCCGTAGGGAAACCGAGTGTTAACTGCGCGTTTAGTTGCA 927 Query 186 GGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGT 245 | ||||| ||||||| |||||||| ||| | ||||||||||| ||||| Sbjct 928 AGGTGTAGACCCGAAACCGAGTGATCTAGCCATGGGCAGGTTGAAGGTTGAGTAACATCA 987 Query 246 GATGGAGGACCGAACCG 262 ||||||||||||||| Sbjct 988 ACTGGAGGACCGAACCG 1004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 967687916544