Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01000150.1
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
seq248506 179 3e-43
seq268572 174 1e-41
seq62550 174 1e-41
seq296162 161 7e-38
seq291273 156 3e-36
seq127494 152 4e-35
seq62552 143 2e-32
seq204239 107 1e-21
seq62551 80.6 2e-13
>seq248506
Length=643
Score = 179 bits (198), Expect = 3e-43
Identities = 114/124 (92%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
||||| || ||||||||| ||||||||||||||||||||| ||||||||||| |||| |
Sbjct 553 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACAAAGTGGTGAGCGTTC 494
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 493 TCCCGAAGGTTAAACTACCCACTTCTTTTGCAGCCCACTCCCATGGTGTGACGGGCGGTG 434
Query 135 TGTA 138
||||
Sbjct 433 TGTA 430
>seq268572
Length=1256
Score = 174 bits (192), Expect = 1e-41
Identities = 113/124 (91%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || ||
Sbjct 1180 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 1121
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
|||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1120 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 1061
Query 135 TGTA 138
||||
Sbjct 1060 TGTA 1057
>seq62550
Length=927
Score = 174 bits (192), Expect = 1e-41
Identities = 113/124 (91%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
||||| || ||||||||| ||||||||||||||||||||| |||| ||||||| |||||
Sbjct 375 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACACCGTGGTAAACGCCC 434
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||
Sbjct 435 TCCCGAAGGTTAAGCTATCTACTTCTGGTGCAGCCCACTCCCATGGTGTGACGGGCGGTG 494
Query 135 TGTA 138
||||
Sbjct 495 TGTA 498
>seq296162
Length=562
Score = 161 bits (178), Expect = 7e-38
Identities = 110/124 (89%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
||||| || ||||||||| ||||||||||||||||||||| |||| ||||| | |||||
Sbjct 485 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACACCGTGGTCATCGCCC 426
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||
Sbjct 425 TCCCGAAGGTTAAGCTAATGACTTCTGGTGCAGCCCACTCCCATGGTGTGACGGGCGGTG 366
Query 135 TGTA 138
||||
Sbjct 365 TGTA 362
>seq291273
Length=665
Score = 156 bits (172), Expect = 3e-36
Identities = 109/124 (88%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
||||| || ||||||||| ||||||||||||||||||||||||| ||||||| || ||
Sbjct 325 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACTCCGTGGTAAACGTCC 266
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
|||||| ||||| ||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 265 TCCCGAGGGTTAGACTATCTACTTCTGGAGCAACCCACTCCCATGGTGTGACGGGCGGTG 206
Query 135 TGTA 138
||||
Sbjct 205 TGTA 202
>seq127494
Length=1980
Score = 152 bits (168), Expect = 4e-35
Identities = 108/124 (87%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||| || |||| ||||| | ||| |
Sbjct 1416 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATCAACCACACCGTGGTGAACGCTC 1357
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
|||||||||||||||| | |||||| ||||| | ||||||||||||||||||||||||
Sbjct 1356 CCCCGAAGGTTAAGCTATCCACTTCTGGTGCAATCAACTCCCATGGTGTGACGGGCGGTG 1297
Query 135 TGTA 138
||||
Sbjct 1296 TGTA 1293
>seq62552
Length=580
Score = 143 bits (158), Expect = 2e-32
Identities = 109/126 (87%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
||||| || ||||||||| ||||||||||||||||||||| |||| ||||| | ||||
Sbjct 84 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACACCGTGGTCATCGCCA 143
Query 75 TCCC-GAAGG-TTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGG 132
|||| ||||| |||||||| |||||| |||| |||||||||||||||||||||||||
Sbjct 144 TCCCCGAAGGGTTAAGCTAATGACTTCTGGTGCAGCCCACTCCCATGGTGTGACGGGCGG 203
Query 133 TGTGTA 138
||||||
Sbjct 204 TGTGTA 209
>seq204239
Length=594
Score = 107 bits (118), Expect = 1e-21
Identities = 82/97 (85%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
||||| || ||||||||| ||||||||||||||||||||||||| ||||||| || ||
Sbjct 498 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACTCCGTGGTAAACGTCC 557
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCA 111
|||||| ||||| ||| |||||||| ||||||||
Sbjct 558 TCCCGAGGGTTAGACTATCTACTTCTGGAGCAACCCA 594
>seq62551
Length=224
Score = 80.6 bits (88), Expect = 2e-13
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCG 71
||||| || ||||||||| ||||||||||||||||||||| ||||||||||| ||||
Sbjct 168 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACAAAGTGGTGAGCG 224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 343897373520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |