Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq248506 179 3e-43 seq268572 174 1e-41 seq62550 174 1e-41 seq296162 161 7e-38 seq291273 156 3e-36 seq127494 152 4e-35 seq62552 143 2e-32 seq204239 107 1e-21 seq62551 80.6 2e-13 >seq248506 Length=643 Score = 179 bits (198), Expect = 3e-43 Identities = 114/124 (92%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||||||| ||||||||||||||||||||| ||||||||||| |||| | Sbjct 553 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACAAAGTGGTGAGCGTTC 494 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 493 TCCCGAAGGTTAAACTACCCACTTCTTTTGCAGCCCACTCCCATGGTGTGACGGGCGGTG 434 Query 135 TGTA 138 |||| Sbjct 433 TGTA 430 >seq268572 Length=1256 Score = 174 bits (192), Expect = 1e-41 Identities = 113/124 (91%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||||||||||| ||||||| || || Sbjct 1180 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACACCGTGGTAACCGTCC 1121 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1120 TCCCGAAGGTTAGACTAGCTACTTCTGGTGCAACCCACTCCCATGGTGTGACGGGCGGTG 1061 Query 135 TGTA 138 |||| Sbjct 1060 TGTA 1057 >seq62550 Length=927 Score = 174 bits (192), Expect = 1e-41 Identities = 113/124 (91%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||||||| ||||||||||||||||||||| |||| ||||||| ||||| Sbjct 375 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACACCGTGGTAAACGCCC 434 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||| Sbjct 435 TCCCGAAGGTTAAGCTATCTACTTCTGGTGCAGCCCACTCCCATGGTGTGACGGGCGGTG 494 Query 135 TGTA 138 |||| Sbjct 495 TGTA 498 >seq296162 Length=562 Score = 161 bits (178), Expect = 7e-38 Identities = 110/124 (89%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||||||| ||||||||||||||||||||| |||| ||||| | ||||| Sbjct 485 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACACCGTGGTCATCGCCC 426 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||| Sbjct 425 TCCCGAAGGTTAAGCTAATGACTTCTGGTGCAGCCCACTCCCATGGTGTGACGGGCGGTG 366 Query 135 TGTA 138 |||| Sbjct 365 TGTA 362 >seq291273 Length=665 Score = 156 bits (172), Expect = 3e-36 Identities = 109/124 (88%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||||||| ||||||||||||||||||||||||| ||||||| || || Sbjct 325 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACTCCGTGGTAAACGTCC 266 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 265 TCCCGAGGGTTAGACTATCTACTTCTGGAGCAACCCACTCCCATGGTGTGACGGGCGGTG 206 Query 135 TGTA 138 |||| Sbjct 205 TGTA 202 >seq127494 Length=1980 Score = 152 bits (168), Expect = 4e-35 Identities = 108/124 (87%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||| || |||| ||||| | ||| | Sbjct 1416 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATCAACCACACCGTGGTGAACGCTC 1357 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 |||||||||||||||| | |||||| ||||| | |||||||||||||||||||||||| Sbjct 1356 CCCCGAAGGTTAAGCTATCCACTTCTGGTGCAATCAACTCCCATGGTGTGACGGGCGGTG 1297 Query 135 TGTA 138 |||| Sbjct 1296 TGTA 1293 >seq62552 Length=580 Score = 143 bits (158), Expect = 2e-32 Identities = 109/126 (87%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||||||| ||||||||||||||||||||| |||| ||||| | |||| Sbjct 84 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACACCGTGGTCATCGCCA 143 Query 75 TCCC-GAAGG-TTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGG 132 |||| ||||| |||||||| |||||| |||| ||||||||||||||||||||||||| Sbjct 144 TCCCCGAAGGGTTAAGCTAATGACTTCTGGTGCAGCCCACTCCCATGGTGTGACGGGCGG 203 Query 133 TGTGTA 138 |||||| Sbjct 204 TGTGTA 209 >seq204239 Length=594 Score = 107 bits (118), Expect = 1e-21 Identities = 82/97 (85%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||||||| ||||||||||||||||||||||||| ||||||| || || Sbjct 498 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCACTCCGTGGTAAACGTCC 557 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCA 111 |||||| ||||| ||| |||||||| |||||||| Sbjct 558 TCCCGAGGGTTAGACTATCTACTTCTGGAGCAACCCA 594 >seq62551 Length=224 Score = 80.6 bits (88), Expect = 2e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCG 71 ||||| || ||||||||| ||||||||||||||||||||| ||||||||||| |||| Sbjct 168 CCCTAGGGCTACCTTGTTACGACTTCACCCCAGTCATGAACCACAAAGTGGTGAGCG 224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 343897373520