Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq459 183 5e-44 seq4032 102 1e-19 >seq459 Length=1892 Score = 183 bits (202), Expect = 5e-44 Identities = 190/240 (79%), Gaps = 7/240 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 1750 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 1693 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||| ||||||| |||| | || Sbjct 1692 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 1633 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 ||||| ||| ||||| |||| | | || || ||| | || ||||||| |||||||||| Sbjct 1632 ACCCGCGCCTCTCGGCGAAGGGTAGACACACGCTGA-TCCAGTCAGTGTGGCGCGCGTGC 1574 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAA 238 |||| | |||||||||||||||||||||||||||||| ||||| || |||| ||||| Sbjct 1573 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGG-CTAAA 1516 >seq4032 Length=214 Score = 102 bits (112), Expect = 1e-19 Identities = 86/103 (83%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||| ||| Sbjct 127 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 70 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| | | || ||||||||| | ||||| ||||||| Sbjct 69 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCTATCACGA 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 748171717930