Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq459 167 4e-39 >seq459 Length=1892 Score = 167 bits (184), Expect = 4e-39 Identities = 210/282 (74%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || | | | | | |||||||||||||||||||||||| Sbjct 817 ATGCTCTTAGCTGAGTGTCCCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 876 Query 98 TCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | || |||||| ||| |||||||| ||||||||| | |||| Sbjct 877 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 935 Query 156 TCTATTTTGTTGGTTT----CTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||| ||||| || || | | | |||||||| ||||| | |||||| Sbjct 936 TCTATTTTGTGGGTTTTCTTCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGC 995 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| | |||||||||||||||||| ||||| || | ||||| Sbjct 996 ATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAA 1055 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||| || ||||| |||||||||||||||| |||||||||| Sbjct 1056 AGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910390605696