Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq156888 325 4e-87 seq12757 170 2e-40 seq12755 134 1e-29 seq463838 132 5e-29 seq12756 125 7e-27 seq40952 104 2e-20 >seq156888 Length=1118 Score = 325 bits (360), Expect = 4e-87 Identities = 188/193 (97%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 343 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTTGTCTAAAA 284 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120 || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 283 GACAACTCGTCATCAGCTCTCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 224 Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 223 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 164 Query 181 TTAACCAGAAGTA 193 |||||||||||| Sbjct 163 ATAACCAGAAGTA 151 >seq12757 Length=610 Score = 170 bits (188), Expect = 2e-40 Identities = 160/204 (78%), Gaps = 16/204 (8%) Strand=Plus/Minus Query 3 ACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGA 62 |||||||||||||||| ||||| |||||||||||||||||| ||||| ||| || | Sbjct 420 ACCTGAAGCTTAGAAGATTTTCCTGGAAGCATGGCATCAACTACTTCATCACCTTA---G 364 Query 63 TAACTCGTCATCAGCTCCCGGCCT-TAGA------------ATCCCGGATTTACCTAAGA 109 | ||||||||||||||| | |||| || | |||||||||| ||||||| Sbjct 363 TGACTCGTCATCAGCTCTCAGCCTGTACATTAAAGTACGATTTCCCGGATTTGCCTAAGA 304 Query 110 TTCCAGCCTACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTC 169 || ||||||||||||||| |||| ||||||||| ||| ||||||||||||||||| Sbjct 303 AATCAACCTACCACCTTAAACGCGGACTACCAACGCCGCGCTAGCCTAGCCTTCTCCGTC 244 Query 170 CCTCCATCGCATTAACCAGAAGTA 193 |||||||||| | | | |||||| Sbjct 243 TCTCCATCGCAGTTAGCGGAAGTA 220 >seq12755 Length=1866 Score = 134 bits (148), Expect = 1e-29 Identities = 138/177 (78%), Gaps = 5/177 (3%) Strand=Plus/Minus Query 10 GCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG-ATAACTC 68 ||||||||||||||| ||||||||||| || ||||||| | || ||| | | || Sbjct 686 GCTTAGAAGCTTTTCCTGGAAGCATGGTATTTGCCACTTCAC--TGTACAAGTACAGCTT 629 Query 69 GTCATCAGCTCCCGGCCTTAGAAT--CCCGGATTTACCTAAGATTCCAGCCTACCACCTT 126 | ||||| || | ||| | || |||||||||||||||| | ||||||| |||| Sbjct 628 GCTATCAGATCTCAGCCATGTAACAGCCCGGATTTACCTAAGCTGTAAGCCTACATCCTT 569 Query 127 AAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATTA 183 || |||||||||||||||| |||| | || ||||||||||||||||||||||||| Sbjct 568 TCACCTGGACAACCAACGCCAGGCTGACATAACCTTCTCCGTCCCTCCATCGCATTA 512 >seq463838 Length=280 Score = 132 bits (146), Expect = 5e-29 Identities = 143/187 (76%), Gaps = 7/187 (4%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 ||| |||||||||||| |||||| ||||||||||||||||| ||||| | || | Sbjct 213 TTATCTGAAGCTTAGAGACTTTTCCTGGAAGCATGGCATCAATGACTTCAGTACCTTAG- 155 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAG---AATCCCGGATTTACCTAAGATTCCAGCC 117 || |||| |||| || | | |||| || |||||||||||||||| |||| || Sbjct 154 --TACCTCGACATCGTATCTCAGTGTTAGTAGAAACCCGGATTTACCTAAGTCTCCA-CC 98 Query 118 TACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATC 177 ||| ||| ||| |||||||||| ||||| || ||||||||||||||||| ||||| Sbjct 97 TACATACTTGAACCTGGACAACCATCGCCAGGCCCACCTAGCCTTCTCCGTCCTCCCATC 38 Query 178 GCATTAA 184 ||| ||| Sbjct 37 GCAATAA 31 >seq12756 Length=1019 Score = 125 bits (138), Expect = 7e-27 Identities = 143/194 (74%), Gaps = 15/194 (8%) Strand=Plus/Minus Query 2 TACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAG 61 || |||||||||||| | ||||| ||||||| || |||||| ||||| || | | || Sbjct 705 TATCTGAAGCTTAGAGGTTTTTCCTGGAAGCCGGGTATCAACTACTTCATCTCCGTAGAG 646 Query 62 ATAACTCGTCATCAGCTCCCGGCCTT------------AGAATCCCGGATTTACCTAAGA 109 |||||||||||| || | || || || ||||||||| |||||| Sbjct 645 ---ACTCGTCATCAGTTCTCAGCATTCTCACTAAAGAGAGCGACCCGGATTTGCCTAAGT 589 Query 110 TTCCAGCCTACCACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTC 169 | |||||| ||||||||| |||||||||| ||||| ||| ||||| ||||||||||| Sbjct 588 CACTTGCCTACTACCTTAAACATGGACAACCATCGCCATGCTAGCCTAACCTTCTCCGTC 529 Query 170 CCTCCATCGCATTA 183 | |||||||| || Sbjct 528 ACCCCATCGCAATA 515 >seq40952 Length=1454 Score = 104 bits (114), Expect = 2e-20 Identities = 132/179 (74%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 |||||||||||| ||||||| |||||| ||||||||| | ||||| ||| || | || Sbjct 773 CTGAAGCTTAGAGGCTTTTCCTGGAAGTATGGCATCAGCAACTTCATCACCTTAGTGA-- 830 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCC---CGGATTTACCTAAGATTCCAGCCTACC 121 |||||| || || | | ||| | | ||||||||||||| | ||||| Sbjct 831 -CTCGTC-TCGTGTCTCAGGTTTAATGTTCGTCCGGATTTACCTAAACAAACGCCCTACT 888 Query 122 ACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 ||| || ||||| |||||||||| ||| || |||||| ||||||||| |||||||| Sbjct 889 CACTTTCACATGGACTACCAACGCCATGCTTGCTTAGCCTGCTCCGTCCCCCCATCGCA 947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515760928956