Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq492919 161 9e-38
seq478353 104 2e-20
seq199094 89.7 5e-16
seq257960 80.6 3e-13
>seq492919
Length=384
Score = 161 bits (178), Expect = 9e-38
Identities = 140/173 (81%), Gaps = 3/173 (2%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
|| |||||||| ||||||| ||||||| ||||| ||||||||||||||||||||||||||
Sbjct 131 GGGGGATGCCTTGGCTCTCAGAGGCGATGAAGGGCGTGATAAGCTGCGAAAAGCTACGGG 190
Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127
|| ||||| || ||||||||||| ||| | |||||||||||||| ||| ||| |||
Sbjct 191 GACGAGCACACACCGATTGATCCGTAAATACCTGAATGGGGCAACCCACTATGTTGAAGA 250
Query 128 TATATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
||| | | || |||| | ||| ||| | |||||||||||||||||||
Sbjct 251 CATAGTACACCGATAGG---TGGGCAAACCCGCTGAACTGAAACATCTAAGTA 300
>seq478353
Length=548
Score = 104 bits (114), Expect = 2e-20
Identities = 144/196 (73%), Gaps = 23/196 (12%)
Strand=Plus/Plus
Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61
||| ||||||||||| | ||| || ||||||| ||| ||||||||| |||||||||||
Sbjct 133 GCATACGGTGGATGCTT-GGCAGTCAGAGGCGATGAAAGACGTGATAGCCTGCGAAAAGC 191
Query 62 TACGGGGA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC----GA 116
| |||||| | |||| | | |||||||| |||| || |||||||| ||||| |
Sbjct 192 TTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCACCTAA 251
Query 117 TATATTGGAGATA--TATCATAACGC--------TAGGCGTTAG--GCGAACGTGGGGAA 164
||| || || |||| ||| || ||||| | || |||||| ||||||
Sbjct 252 CATA----AGTTAGGTATCTTAA-GCTGAATACATAGGCTTAAGAAGCGAACCAGGGGAA 306
Query 165 CTGAAACATCTAAGTA 180
||||||||||||||||
Sbjct 307 CTGAAACATCTAAGTA 322
>seq199094
Length=690
Score = 89.7 bits (98), Expect = 5e-16
Identities = 85/109 (78%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
||||||||||||||||| || ||||||| |||||||||| ||| ||||| ||||| |
Sbjct 411 ACGGTGGATGCCTAGGCAGTCAGAGGCGATGAAGGACGTGTTAATCTGCGTTAAGCTGTG 352
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114
|||| | | | | | || |||| |||| ||||||||||| |||||
Sbjct 351 GGGAGTTGATAAAAAGCGTTAATCCACAGATTTCCGAATGGGGGAACCC 303
>seq257960
Length=1007
Score = 80.6 bits (88), Expect = 3e-13
Identities = 133/187 (71%), Gaps = 14/187 (7%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
||||||||||||| ||| || ||||||| ||||||||| |||| |||||||||| |
Sbjct 297 ACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTAATAACTTGCGAAAAGCGTTG 356
Query 66 GGGA-TTGGCACATACG-AATTGATCCGTAGATATCCGAATGGGGCAACCC-GATATATT 122
| || | | | ||| | | |||| | ||||||||||||||| ||||| || ||
Sbjct 357 GCGAGCTAGTA-ATAAGCATTTGAGCTAACGATATCCGAATGGGGAAACCCACATGCATA 415
Query 123 GGAGATATATCATAACGCTA---------GGCGTTAGGCGAACGTGGGGAACTGAAACAT 173
| || ||||| ||| | | || |||| ||| |||||||||||||||
Sbjct 416 AG-CATGTATCACAACATGAATACATAGTGTTGTGAGGCAAACCCGGGGAACTGAAACAT 474
Query 174 CTAAGTA 180
|||||||
Sbjct 475 CTAAGTA 481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 474372706262
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |