Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq12756 205 1e-50
seq507996 201 2e-49
seq12755 185 1e-44
seq156888 165 1e-38
seq40952 156 6e-36
seq12758 141 1e-31
seq388443 132 7e-29
seq12757 116 5e-24
>seq12756
Length=1019
Score = 205 bits (226), Expect = 1e-50
Identities = 197/251 (78%), Gaps = 5/251 (2%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| |||||| |||||||||||||||| |||||||| || ||| | | || ||||
Sbjct 966 TTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTTCGATTTT-GCACA 908
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||| |||||||| || || | ||||||||||||| || |||| |
Sbjct 907 GTGCTGTGTTTTTAATAAACAGTTGCAGCCACCATTTCTCTGCGACCAACAATAGCTTAC 848
Query 122 ----CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| ||| ||||||| || |||| ||||||||||||||||||| ||||||||||
Sbjct 847 GGAGCAAGTCCTTCACCATCATTGGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCC 788
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237
| |||||| ||| ||||| | | | |||||||||||||||||||| ||||||||||||
Sbjct 787 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTACCTAACCACCTGTGTC 728
Query 238 GGTTTACGGTA 248
||||| ||||
Sbjct 727 GGTTTGGGGTA 717
>seq507996
Length=356
Score = 201 bits (222), Expect = 2e-49
Identities = 199/255 (78%), Gaps = 8/255 (3%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| |||||| ||| ||||||| ||||| || ||||||||| ||| | | ||| |||
Sbjct 279 CTTAACCTTCCGGCACTGGGCAGGTGTCAGCCCATATACATCGCCTTTCAG-CTTAGCAT 221
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC- 119
||||||||||||| |||||||| ||| ||| ||| ||||| ||| || ||||
Sbjct 220 AGACCTGTGTTTTTGCTAAACAGTTGCTCGAATCTCTTCACTGCGGCCATCAAAAGCTTT 161
Query 120 --AACACGTCGTTC----ACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTT 173
||| ||| ||| ||| | ||||||||||||||||||||||||||||||||||
Sbjct 160 AGAACGCGTGTTTCTATTACCTTTAATGGCACCCCTTCTCCCGAAGTTACGGGGCCATTT 101
Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233
||| || ||||||| | | |||| || | ||||||||| ||||| ||| ||||||||
Sbjct 100 TGCAGAGTTCCTTAGCGAGAGTTAGCCTGTACGCCTTAGATTTCTCATCCTAACCACCTG 41
Query 234 TGTCGGTTTACGGTA 248
|||||||||||||||
Sbjct 40 TGTCGGTTTACGGTA 26
>seq12755
Length=1866
Score = 185 bits (204), Expect = 1e-44
Identities = 194/252 (77%), Gaps = 6/252 (2%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| ||||||| |||||||||| | ||| || ||||| || |||| | || || |||
Sbjct 956 TTAACCTTCCAGCACCGGGCAGACATCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 898
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||| |||||||| || | || | |||||||| ||| ||||||||
Sbjct 897 GTGCTGTGTTTTTAATAAACAGTTGCAGCAGCCTGGTATCTGCGACTGCCAACAGCTCAA 838
Query 122 ----CACGTCGT-TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176
| ||| | |||||| ||| || ||||||||||||||||||| |||||||||
Sbjct 837 GGAGCGTGTCCTATCACCATCAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGC 778
Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236
| | |||||| | || ||||| | | | |||||| ||||||||||||||| |||||||||
Sbjct 777 CTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGATCACCTGTGT 718
Query 237 CGGTTTACGGTA 248
||||||| ||||
Sbjct 717 CGGTTTAGGGTA 706
>seq156888
Length=1118
Score = 165 bits (182), Expect = 1e-38
Identities = 188/251 (75%), Gaps = 5/251 (2%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| |||||| |||||||||||||||| || ||||| || |||| | || || |||
Sbjct 603 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 545
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCT--- 118
| ||||||||||| ||||||||||| | || | ||| ||||| | |||
Sbjct 544 GTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCGTGGGCTTAC 485
Query 119 -CAACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| | | |||||| || ||| | ||||||||||||||||||| |||||||||||
Sbjct 484 GCAGTAAATGCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCC 425
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237
| |||||| ||| ||||| | | | |||||| |||||||||||| ||||||||||||
Sbjct 424 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCACCTGTGTC 365
Query 238 GGTTTACGGTA 248
||||| ||||
Sbjct 364 GGTTTGGGGTA 354
>seq40952
Length=1454
Score = 156 bits (172), Expect = 6e-36
Identities = 191/255 (75%), Gaps = 12/255 (5%)
Strand=Plus/Plus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| |||||| ||||||||||| |||| |||||||| || ||| | | || ||||
Sbjct 508 TTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCATCTTGCGATTTT-GCACA 566
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||| ||||||||| | || || || ||||| | || | ||| |
Sbjct 567 GTGCTGTGTTTTTAATAAACAGTCCCAGCCACCTGGTCACTGCGGCTCCCGTCCGCTTAG 626
Query 122 ----CACGTCGTTCACCAGCAG-TGGCACC---CCTTCTCCCGAAGTTACGGGGCCATTT 173
|| ||| ||| || ||| | | | | ||||||||||||||||||| | ||||
Sbjct 627 AGAGCAAGTC--TCATCA-CAGATAGGAGCGTACCTTCTCCCGAAGTTACGGTACGATTT 683
Query 174 TGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTG 233
|||| | |||||| ||| ||||| | | | |||||||||||||||||||||||||||||
Sbjct 684 TGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTACCTGACCACCTG 743
Query 234 TGTCGGTTTACGGTA 248
||||||||| ||||
Sbjct 744 TGTCGGTTTGGGGTA 758
>seq12758
Length=1039
Score = 141 bits (156), Expect = 1e-31
Identities = 183/251 (73%), Gaps = 5/251 (2%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| |||||| |||||||||||||||| |||||||| || ||| | | || ||||
Sbjct 602 TTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTTCGATTTT-GCACA 544
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
| ||||||||||| |||||||| | || || | || |||| || ||| |
Sbjct 543 GTGCTGTGTTTTTAATAAACAGTTCCAGCCACCTGGTTACTTCGACTACTCGTCGCTTAC 484
Query 122 ----CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCC 177
|| | || || ||| || ||||||||||||||||||| | ||||||||
Sbjct 483 ACCGCAAGGGTTTAACGTTGAGTAGCGTACCTTCTCCCGAAGTTACGGTACTATTTTGCC 424
Query 178 GAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTC 237
| |||||| ||| ||||| | | | |||||||||||||||||||| ||||||||||||
Sbjct 423 TAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTACCTAACCACCTGTGTC 364
Query 238 GGTTTACGGTA 248
||||| ||||
Sbjct 363 GGTTTGGGGTA 353
>seq388443
Length=855
Score = 132 bits (146), Expect = 7e-29
Identities = 178/249 (71%), Gaps = 23/249 (9%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| ||||||||||| ||||| || ||||| || ||||| | || |||
Sbjct 169 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTT-GCAG 227
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| ||||||||||| | || ||| ||||| ||| ||
Sbjct 228 AGCCCTGTGTTTTTGATAAACAGTCGCCTGGACCTCTTCACTGCGGCCAGCA-------- 279
Query 121 ACACGTCGTTCACCAGCAGTGG-CACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179
|| || |||| | ||||||||||||||||||||| | |||||||| |
Sbjct 280 --------TT-----GCTGTGGGCGACCCTTCTCCCGAAGTTACGGGTCTATTTTGCCTA 326
Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239
|||||||| ||| || | ||| | |||||| |||||| | || |||||||||||
Sbjct 327 ATTCCTTAGCCATGAATCTCTCGAGCACCTTAGAATTCTCATCTCAACTACCTGTGTCGG 386
Query 240 TTTACGGTA 248
||| |||||
Sbjct 387 TTTGCGGTA 395
>seq12757
Length=610
Score = 116 bits (128), Expect = 5e-24
Identities = 133/177 (75%), Gaps = 5/177 (3%)
Strand=Plus/Minus
Query 77 TAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA----CACGTCGT-TC 131
|||||||| || || || | |||||||| || ||||| | || ||| ||
Sbjct 609 TAAACAGTTGCAGCCACCTGGTATCTGCGACTGCCGTCAGCTTAGGGAGCAAGTCCCATC 550
Query 132 ACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCA 191
|||| ||| || ||||||||||||||||||| |||||||||| | |||||| | |
Sbjct 549 ACCAACAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAGTTCCTTCAGCC 490
Query 192 CAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
||||| | | | |||||| |||||||||||| |||||||||||||||||| ||||
Sbjct 489 GAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCGACCACCTGTGTCGGTTTGGGGTA 433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 690864948046
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