Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq156888 728 0.0 seq12755 578 1e-162 seq40952 524 2e-146 seq12758 500 2e-139 seq156889 394 2e-107 seq12756 358 2e-96 seq156799 273 5e-71 seq388443 257 4e-66 seq12757 190 5e-46 seq507996 159 9e-37 >seq156888 Length=1118 Score = 728 bits (806), Expect = 0.0 Identities = 417/426 (98%), Gaps = 0/426 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 738 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 678 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 618 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 617 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 558 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 557 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 498 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 ||| || ||||||| || || | ||||||||||||||||||||||||||||||||||||| Sbjct 497 GGCGTGGGCTTACGCAGTAAATGCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 438 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 420 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 437 GTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 378 Query 421 AACCAC 426 |||||| Sbjct 377 AACCAC 372 >seq12755 Length=1866 Score = 578 bits (640), Expect = 1e-162 Identities = 381/420 (91%), Gaps = 1/420 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||| |||||||||| |||||||| ||||||||||||||| | |||||||||| Sbjct 1150 CGCGGGTACACAGCATCTTCACTGCGATTTCGATTTCACTGAGTCTCTGCTGGAGACAGC 1091 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 || |||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1090 GCTGCCATCATTATGTCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1031 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| | Sbjct 1030 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC 971 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 |||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| Sbjct 970 GCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGACATCACACCCTATACGTCCACTT 911 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct 910 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTTGCAGCAGCCTGGTATCTGCGACT 851 Query 301 GGCATGAGCTTACGGAGCAAGTCCT-TCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359 | || |||| | ||||| ||||| ||||| ||| | ||| |||||||||||||||||| Sbjct 850 GCCAACAGCTCAAGGAGCGTGTCCTATCACCATCAGCAGCGTACCTTCTCCCGAAGTTAC 791 Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 ||| || ||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 790 GGTACCATTTTGCCTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 731 >seq40952 Length=1454 Score = 524 bits (580), Expect = 2e-146 Identities = 375/429 (87%), Gaps = 3/429 (1%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 312 CGCGGGTACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 371 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372 GTGGCCATGGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 431 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| | || Sbjct 432 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCCTA 491 Query 181 --GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 | ||||||||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct 492 AGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCATC 551 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 || || |||||| ||||||||||||||||||||||||| |||| |||||| || || Sbjct 552 TTGCGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTCCCAGCCACCTGGTCACTGCGG 611 Query 299 CCGGCATGAGCTTACGGAGCAAGTC-CTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357 | | | ||||| ||||||||| | |||| | ||| |||||||||||||||| Sbjct 612 CTCCCGTCCGCTTAGAGAGCAAGTCTCATCACAGATAGGAGCGTACCTTCTCCCGAAGTT 671 Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417 ||||| | ||||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 672 ACGGTACGATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTA 731 Query 418 CCCAACCAC 426 || ||||| Sbjct 732 CCTGACCAC 740 >seq12758 Length=1039 Score = 500 bits (554), Expect = 2e-139 Identities = 372/432 (86%), Gaps = 10/432 (2%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || || ||||||| || || | ||||||||||||||||||||||||||||||| Sbjct 798 CGCGGGTATACGGCATCTTAACCGCAAATTCAATTTCACTGAGTCTCGGGTGGAGACAGT 739 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 738 GTGGCCATGATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 679 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG-CGTT 179 ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | | Sbjct 678 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCATGAGCTTCGACCTA 619 Query 180 AG-CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 || ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 618 AGTCTAACCCAATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATC 559 Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 ||||| |||||| |||||||||||||||||||||||| |||| |||||| |||||| Sbjct 558 TTTCGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTTCCAGCCACCTGGTTACTTCGA 499 Query 299 C----CGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAA 354 | || | |||||| ||||| || || | | ||| ||||||||||||| Sbjct 498 CTACTCGTC----GCTTACACCGCAAGGGTTTAACGTTGAGTAGCGTACCTTCTCCCGAA 443 Query 355 GTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCT 414 |||||||| | ||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 442 GTTACGGTACTATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCT 383 Query 415 CTACCCAACCAC 426 ||||| |||||| Sbjct 382 CTACCTAACCAC 371 >seq156889 Length=532 Score = 394 bits (436), Expect = 2e-107 Identities = 262/291 (90%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || || |||||||||| || ||||||| ||||||||||||||| |||||||||| Sbjct 291 CGCGGGTATACGGCATCTTCACCGCAATTTCAACTTCACTGAGTCTCGGCTGGAGACAGC 232 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 231 GTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 172 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | | Sbjct 171 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCATGAGCTTCTCCGAA 112 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 | |||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 111 GATAACCCAATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTT 52 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTA 291 || |||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct 51 GCGATTTTGCACAGTGCTGTGTTTTTGATAAACAGTTGCAGCCACCTGGTA 1 >seq12756 Length=1019 Score = 358 bits (396), Expect = 2e-96 Identities = 252/285 (88%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 144 GCCGTTTACCGGGGCTTCGATCAAGAGCTTCG-CGTTAG-CTAACCCCATCAATTAACCT 201 ||||||||||||||||||||||| |||||||| | | || ||||||| |||||||||||| Sbjct 1019 GCCGTTTACCGGGGCTTCGATCATGAGCTTCGACCTAAGTCTAACCCAATCAATTAACCT 960 Query 202 TCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTG 261 ||||||||||||||||||||||||| |||||||| |||||| |||||| ||||||||| Sbjct 959 TCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTTCGATTTTGCACAGTGCTGTG 900 Query 262 TTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAG 321 ||||||||||||||| ||||| || | ||| ||||| || ||||||||||||||| Sbjct 899 TTTTTAATAAACAGTTGCAGCCACCATTTCTCTGCGACCAACAATAGCTTACGGAGCAAG 840 Query 322 TCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCT 381 ||||||||| ||| |||| ||||||||||||||||||||| || ||||||||||||||| Sbjct 839 TCCTTCACCATCATTGGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAGTTCCT 780 Query 382 TCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 || |||||||||||||||||||||| |||||||||||| |||||| Sbjct 779 TCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTACCTAACCAC 735 >seq156799 Length=475 Score = 273 bits (302), Expect = 5e-71 Identities = 160/166 (96%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 166 CGCGGGTACACTGCATCTTAACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 107 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 106 GTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 47 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 46 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 1 >seq388443 Length=855 Score = 257 bits (284), Expect = 4e-66 Identities = 295/397 (74%), Gaps = 26/397 (7%) Strand=Plus/Plus Query 31 CAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGT 89 ||||||||| ||| ||| || ||||||| | | |||||||| |||||||||||||| Sbjct 6 CAATTTCACCGAG-CTCATGGCTGAGACAGTGTCCAGATCGTTACACCATTCGTGCAGGT 64 Query 90 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTT 149 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 65 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTT 124 Query 150 TACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCAC 209 ||| |||||||| | | ||||| | || |||| | || |||||||||| |||| Sbjct 125 TACTGGGGCTTCATTTCAATGCTTCTCCGAAGATAACATCTCCACTTAACCTTCCAGCAC 184 Query 210 CGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAAT 269 |||||||| |||| |||||||| || ||| || ||||||||| |||||||||| || Sbjct 185 CGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTTGCAGAGCCCTGTGTTTTTGAT 244 Query 270 AAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCAC 329 |||||||||| | ||| | || || || |||| ||| || Sbjct 245 AAACAGTCGCCTGGACCTCTTCACTGCGGCCAGCAT-TGCT----------GT------- 286 Query 330 CCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGA 389 |||| ||||||||||||||||||| | ||||||||| |||||| || Sbjct 287 ------GGGCGACCCTTCTCCCGAAGTTACGGGTCTATTTTGCCTAATTCCTTAGCCATG 340 Query 390 GTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||| ||| |||| | |||||| | |||| || Sbjct 341 AATCTCTCGAGCACCTTAGAATTCTCATCTCAACTAC 377 >seq12757 Length=610 Score = 190 bits (210), Expect = 5e-46 Identities = 139/160 (87%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 268 ATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCT-T 326 ||||||||| ||||| |||||||||| |||| | | | |||||| ||||||||||| | Sbjct 610 ATAAACAGTTGCAGCCACCTGGTATCTGCGACTGCCGTCAGCTTAGGGAGCAAGTCCCAT 551 Query 327 CACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCC 386 |||| || | ||| ||||||||||||||||||||| || ||||||||||||||||| | Sbjct 550 CACCAACAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAGTTCCTTCAGC 491 Query 387 CGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||||||||||||||||||||||||||||||| ||||| Sbjct 490 CGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCGACCAC 451 >seq507996 Length=356 Score = 159 bits (176), Expect = 9e-37 Identities = 230/322 (71%), Gaps = 12/322 (4%) Strand=Plus/Minus Query 108 GAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA 167 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||| || Sbjct 356 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCAAT-TT 298 Query 168 GAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCC 227 ||| | ||||| ||| | ||||||||||||||| ||||||| |||| || Sbjct 297 GAG--------TCGCTAAACCCTCCTCTTAACCTTCCGGCACTGGGCAGGTGTCAGCCCA 246 Query 228 TATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCT 287 ||||| || ||||| || ||| || |||||||||| |||||||| || || Sbjct 245 TATACATCGCCTTTCAGCTTAGCATAGACCTGTGTTTTTGCTAAACAGTTGCTCGAATCT 186 Query 288 GGTATCTTCGACCGGCATGAGCTTACGGA-GCAAG--TCCTTCACCCTCACCGGCGCACC 344 | || || || || ||||| | | || | || | ||| | | ||| | || Sbjct 185 CTTCACTGCGGCCATCAAAAGCTTTAGAACGCGTGTTTCTATTACCTTTAATGGCACCCC 126 Query 345 TTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCC 404 ||||||||||||||||| ||| |||||| |||||||| | ||||| | |||| Sbjct 125 TTCTCCCGAAGTTACGGGGCCATTTTGCAGAGTTCCTTAGCGAGAGTTAGCCTGTACGCC 66 Query 405 TTGGTATTCTCTACCCAACCAC 426 || | ||||| || |||||| Sbjct 65 TTAGATTTCTCATCCTAACCAC 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1254174470784