Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq156888 728 0.0
seq12755 578 1e-162
seq40952 524 2e-146
seq12758 500 2e-139
seq156889 394 2e-107
seq12756 358 2e-96
seq156799 273 5e-71
seq388443 257 4e-66
seq12757 190 5e-46
seq507996 159 9e-37
>seq156888
Length=1118
Score = 728 bits (806), Expect = 0.0
Identities = 417/426 (98%), Gaps = 0/426 (0%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 738
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 678
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 618
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 617 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 558
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 557 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 498
Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360
||| || ||||||| || || | |||||||||||||||||||||||||||||||||||||
Sbjct 497 GGCGTGGGCTTACGCAGTAAATGCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 438
Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 420
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 437 GTGCCATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 378
Query 421 AACCAC 426
||||||
Sbjct 377 AACCAC 372
>seq12755
Length=1866
Score = 578 bits (640), Expect = 1e-162
Identities = 381/420 (91%), Gaps = 1/420 (0%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||| |||||||||| |||||||| ||||||||||||||| | ||||||||||
Sbjct 1150 CGCGGGTACACAGCATCTTCACTGCGATTTCGATTTCACTGAGTCTCTGCTGGAGACAGC 1091
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
|| |||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 GCTGCCATCATTATGTCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1031
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1030 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTAC 971
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
|||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||
Sbjct 970 GCTAACCCCATCAATTAACCTTCCAGCACCGGGCAGACATCACACCCTATACGTCCACTT 911
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||
Sbjct 910 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTTGCAGCAGCCTGGTATCTGCGACT 851
Query 301 GGCATGAGCTTACGGAGCAAGTCCT-TCACCCTCACCGGCGCACCTTCTCCCGAAGTTAC 359
| || |||| | ||||| ||||| ||||| ||| | ||| ||||||||||||||||||
Sbjct 850 GCCAACAGCTCAAGGAGCGTGTCCTATCACCATCAGCAGCGTACCTTCTCCCGAAGTTAC 791
Query 360 GGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419
||| || ||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 790 GGTACCATTTTGCCTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 731
>seq40952
Length=1454
Score = 524 bits (580), Expect = 2e-146
Identities = 375/429 (87%), Gaps = 3/429 (1%)
Strand=Plus/Plus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 312 CGCGGGTACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 371
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 GTGGCCATGGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 431
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 432 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCTCCCTA 491
Query 181 --GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 492 AGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCATC 551
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298
|| || |||||| ||||||||||||||||||||||||| |||| |||||| || ||
Sbjct 552 TTGCGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTCCCAGCCACCTGGTCACTGCGG 611
Query 299 CCGGCATGAGCTTACGGAGCAAGTC-CTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357
| | | ||||| ||||||||| | |||| | ||| ||||||||||||||||
Sbjct 612 CTCCCGTCCGCTTAGAGAGCAAGTCTCATCACAGATAGGAGCGTACCTTCTCCCGAAGTT 671
Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417
||||| | ||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 672 ACGGTACGATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTA 731
Query 418 CCCAACCAC 426
|| |||||
Sbjct 732 CCTGACCAC 740
>seq12758
Length=1039
Score = 500 bits (554), Expect = 2e-139
Identities = 372/432 (86%), Gaps = 10/432 (2%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || || ||||||| || || | |||||||||||||||||||||||||||||||
Sbjct 798 CGCGGGTATACGGCATCTTAACCGCAAATTCAATTTCACTGAGTCTCGGGTGGAGACAGT 739
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 738 GTGGCCATGATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 679
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG-CGTT 179
||||||||||||| |||||||||||||||||||||||||||||||| |||||||| | |
Sbjct 678 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCATGAGCTTCGACCTA 619
Query 180 AG-CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
|| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 618 AGTCTAACCCAATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATC 559
Query 239 TTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298
||||| |||||| |||||||||||||||||||||||| |||| |||||| ||||||
Sbjct 558 TTTCGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTTCCAGCCACCTGGTTACTTCGA 499
Query 299 C----CGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAA 354
| || | |||||| ||||| || || | | ||| |||||||||||||
Sbjct 498 CTACTCGTC----GCTTACACCGCAAGGGTTTAACGTTGAGTAGCGTACCTTCTCCCGAA 443
Query 355 GTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCT 414
|||||||| | ||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 442 GTTACGGTACTATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGTATTCT 383
Query 415 CTACCCAACCAC 426
||||| ||||||
Sbjct 382 CTACCTAACCAC 371
>seq156889
Length=532
Score = 394 bits (436), Expect = 2e-107
Identities = 262/291 (90%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| || || |||||||||| || ||||||| ||||||||||||||| ||||||||||
Sbjct 291 CGCGGGTATACGGCATCTTCACCGCAATTTCAACTTCACTGAGTCTCGGCTGGAGACAGC 232
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 231 GTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 172
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180
||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | |
Sbjct 171 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCATGAGCTTCTCCGAA 112
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
| |||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 111 GATAACCCAATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTT 52
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTA 291
|| |||||| |||||||||||||| ||||||||| ||||| |||||||
Sbjct 51 GCGATTTTGCACAGTGCTGTGTTTTTGATAAACAGTTGCAGCCACCTGGTA 1
>seq12756
Length=1019
Score = 358 bits (396), Expect = 2e-96
Identities = 252/285 (88%), Gaps = 2/285 (1%)
Strand=Plus/Minus
Query 144 GCCGTTTACCGGGGCTTCGATCAAGAGCTTCG-CGTTAG-CTAACCCCATCAATTAACCT 201
||||||||||||||||||||||| |||||||| | | || ||||||| ||||||||||||
Sbjct 1019 GCCGTTTACCGGGGCTTCGATCATGAGCTTCGACCTAAGTCTAACCCAATCAATTAACCT 960
Query 202 TCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTG 261
||||||||||||||||||||||||| |||||||| |||||| |||||| |||||||||
Sbjct 959 TCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTTCGATTTTGCACAGTGCTGTG 900
Query 262 TTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAG 321
||||||||||||||| ||||| || | ||| ||||| || |||||||||||||||
Sbjct 899 TTTTTAATAAACAGTTGCAGCCACCATTTCTCTGCGACCAACAATAGCTTACGGAGCAAG 840
Query 322 TCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCT 381
||||||||| ||| |||| ||||||||||||||||||||| || |||||||||||||||
Sbjct 839 TCCTTCACCATCATTGGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAGTTCCT 780
Query 382 TCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|| |||||||||||||||||||||| |||||||||||| ||||||
Sbjct 779 TCACCCGAGTTCTCTCAAGCGCCTTAGTATTCTCTACCTAACCAC 735
>seq156799
Length=475
Score = 273 bits (302), Expect = 5e-71
Identities = 160/166 (96%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 166 CGCGGGTACACTGCATCTTAACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 107
Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 GTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 47
Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 166
||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 46 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCA 1
>seq388443
Length=855
Score = 257 bits (284), Expect = 4e-66
Identities = 295/397 (74%), Gaps = 26/397 (7%)
Strand=Plus/Plus
Query 31 CAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGT 89
||||||||| ||| ||| || ||||||| | | |||||||| ||||||||||||||
Sbjct 6 CAATTTCACCGAG-CTCATGGCTGAGACAGTGTCCAGATCGTTACACCATTCGTGCAGGT 64
Query 90 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTT 149
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 65 CGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTT 124
Query 150 TACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCAC 209
||| |||||||| | | ||||| | || |||| | || |||||||||| ||||
Sbjct 125 TACTGGGGCTTCATTTCAATGCTTCTCCGAAGATAACATCTCCACTTAACCTTCCAGCAC 184
Query 210 CGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAAT 269
|||||||| |||| |||||||| || ||| || ||||||||| |||||||||| ||
Sbjct 185 CGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTTGCAGAGCCCTGTGTTTTTGAT 244
Query 270 AAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTCAC 329
|||||||||| | ||| | || || || |||| ||| ||
Sbjct 245 AAACAGTCGCCTGGACCTCTTCACTGCGGCCAGCAT-TGCT----------GT------- 286
Query 330 CCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGA 389
|||| ||||||||||||||||||| | ||||||||| |||||| ||
Sbjct 287 ------GGGCGACCCTTCTCCCGAAGTTACGGGTCTATTTTGCCTAATTCCTTAGCCATG 340
Query 390 GTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|||||| ||| |||| | |||||| | |||| ||
Sbjct 341 AATCTCTCGAGCACCTTAGAATTCTCATCTCAACTAC 377
>seq12757
Length=610
Score = 190 bits (210), Expect = 5e-46
Identities = 139/160 (87%), Gaps = 1/160 (1%)
Strand=Plus/Minus
Query 268 ATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCT-T 326
||||||||| ||||| |||||||||| |||| | | | |||||| ||||||||||| |
Sbjct 610 ATAAACAGTTGCAGCCACCTGGTATCTGCGACTGCCGTCAGCTTAGGGAGCAAGTCCCAT 551
Query 327 CACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCC 386
|||| || | ||| ||||||||||||||||||||| || ||||||||||||||||| |
Sbjct 550 CACCAACAGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTGCCTAGTTCCTTCAGC 491
Query 387 CGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|||||||||||||||||||||||||||||||||| |||||
Sbjct 490 CGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCGACCAC 451
>seq507996
Length=356
Score = 159 bits (176), Expect = 9e-37
Identities = 230/322 (71%), Gaps = 12/322 (4%)
Strand=Plus/Minus
Query 108 GAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA 167
|||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||
Sbjct 356 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCAAT-TT 298
Query 168 GAGCTTCGCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCC 227
||| | ||||| ||| | ||||||||||||||| ||||||| |||| ||
Sbjct 297 GAG--------TCGCTAAACCCTCCTCTTAACCTTCCGGCACTGGGCAGGTGTCAGCCCA 246
Query 228 TATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCT 287
||||| || ||||| || ||| || |||||||||| |||||||| || ||
Sbjct 245 TATACATCGCCTTTCAGCTTAGCATAGACCTGTGTTTTTGCTAAACAGTTGCTCGAATCT 186
Query 288 GGTATCTTCGACCGGCATGAGCTTACGGA-GCAAG--TCCTTCACCCTCACCGGCGCACC 344
| || || || || ||||| | | || | || | ||| | | ||| | ||
Sbjct 185 CTTCACTGCGGCCATCAAAAGCTTTAGAACGCGTGTTTCTATTACCTTTAATGGCACCCC 126
Query 345 TTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCC 404
||||||||||||||||| ||| |||||| |||||||| | ||||| | ||||
Sbjct 125 TTCTCCCGAAGTTACGGGGCCATTTTGCAGAGTTCCTTAGCGAGAGTTAGCCTGTACGCC 66
Query 405 TTGGTATTCTCTACCCAACCAC 426
|| | ||||| || ||||||
Sbjct 65 TTAGATTTCTCATCCTAACCAC 44
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1254174470784
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