Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq388443 345 9e-93 seq156888 264 2e-68 seq12755 241 3e-61 seq156889 237 3e-60 seq12758 237 3e-60 seq40952 232 1e-58 seq156799 187 5e-45 seq507996 183 6e-44 seq12756 86.0 1e-14 >seq388443 Length=855 Score = 345 bits (382), Expect = 9e-93 Identities = 277/332 (83%), Gaps = 3/332 (1%) Strand=Plus/Plus Query 23 TACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGG 82 ||||||||||||||| || | |||||||||| ||| |||||||| || ||||||| || Sbjct 4 TACAATTTCACCGAGCTCATGGCTGAGACAGTGTCCAGATCGTTACACCATTCGTGCAGG 63 Query 83 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGT 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 64 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGT 123 Query 143 TTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCA 202 |||||||||||| | |||| |||||| ||||| ||| ||||||||||||||| Sbjct 124 TTACTGGGGCTTCATTTCAATGCTTCTCCGAAGATAACATCTCCACTTAACCTTCCAGCA 183 Query 203 CCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGG 262 ||||||||| ||||| ||||||| || |||| ||| || ||||| |||||||||||| Sbjct 184 CCGGGCAGGTGTCAGGCCCTATACTTCATCTTACGATTTTGCAGAGCCCTGTGTTTTTGA 243 Query 263 TAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAG--ACAGGCACCCCTTCTCCC 320 ||||||||||| ||| ||| ||| |||||||| | ||| | ||| |||||||||| Sbjct 244 TAAACAGTCGCCTGGACCTCTTCACTGCGGCCAG-CATTGCTGTGGGCGACCCTTCTCCC 302 Query 321 TAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352 |||||||||| |||||||| | ||||||| Sbjct 303 GAAGTTACGGGTCTATTTTGCCTAATTCCTTA 334 >seq156888 Length=1118 Score = 264 bits (292), Expect = 2e-68 Identities = 289/389 (74%), Gaps = 25/389 (6%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | |||| ||||||||| |||||| || ||||||| ||| Sbjct 791 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 732 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 731 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 672 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||| ||||||| | | |||||| | ||||| Sbjct 671 CCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAAC 612 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | |||||||||| ||||||||||||||||| ||||||| || ||| || | Sbjct 611 CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGT 552 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTG---- 296 | ||||| |||||||||| ||||||||||| ||||| | ||| || || | Sbjct 551 TTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCGTG 492 Query 297 -------------------TCA--TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCA 335 ||| || ||| | ||||||||| ||||||||| | || Sbjct 491 GGCTTACGCAGTAAATGCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCA 432 Query 336 TTTTGCCGAGTTCCTTAACAATAGTTCTC 364 ||||||| |||||||| || ||||||| Sbjct 431 TTTTGCCTAGTTCCTTCACCCGAGTTCTC 403 >seq12755 Length=1866 Score = 241 bits (266), Expect = 3e-61 Identities = 228/291 (78%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60 ||| | |||||||||| | |||| | ||||||| |||||| | | ||||||| || Sbjct 1144 TACACAGCATCTTCACTGCGATTTCGATTTCACTGAGTCTCTGCTGGAGACAGCGCTGCC 1085 Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120 ||| ||| | | ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1084 ATCATTATGTCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 1025 Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180 |||||||||||||||||||||||||||||||||| | | |||||| || | ||||| Sbjct 1024 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATCAAGAGCTTCGCTTACGCTAAC 965 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | |||||||||||||||||||||| | ||| ||||||| || ||| || | Sbjct 964 CCCATCAATTAACCTTCCAGCACCGGGCAGACATCACACCCTATACGTCCACTTTCGTGT 905 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG 291 | ||||| |||||||||| |||||||| || |||| | |||||| Sbjct 904 TTGCAGAGTGCTGTGTTTTTAATAAACAGTTGCAGCAGCCTGGTATCTGCG 854 >seq156889 Length=532 Score = 237 bits (262), Expect = 3e-60 Identities = 220/275 (80%), Gaps = 12/275 (4%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCCAAAT 62 |||||||||||||| ||| ||| ||||| |||||| | ||||||| || ||| | Sbjct 281 CGGCATCTTCACCGCAATTTCAACTTCACTGAGTCTCGGCTGGAGACAGCGTGGCCA--T 224 Query 63 CGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 122 | ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 223 CATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 164 Query 123 GTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CTGCTTCGATTGCTCTA 178 |||||||||||||||||||||||| ||||||| | ||| || || ||| || Sbjct 163 GTTATAGTTACGGCCGCCGTTTACCGGGGCTT-CGATCATGAGCTTCTCCGA---AGATA 108 Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238 || | | |||||||||| ||||||||||||||||| | ||||| || |||||||| Sbjct 107 ACCCAATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTGCGA 48 Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273 || ||| | ||||||||||| |||||||| || Sbjct 47 TTTTGCACAGTGCTGTGTTTTTGATAAACAGTTGC 13 >seq12758 Length=1039 Score = 237 bits (262), Expect = 3e-60 Identities = 216/269 (80%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 ||||||||| |||| | | ||||||||| |||||| || ||||||||| || Sbjct 788 CGGCATCTTAACCGCAAATTCAATTTCACTGAGTCTCGGGTGGAGACAGTGTGGCCATGA 729 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 728 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 669 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA-CTGCTTCGA--TTGCTCTAACA 181 |||||||||||||||||||||| ||||||| | ||| ||||||| | |||||| Sbjct 668 TATAGTTACGGCCGCCGTTTACCGGGGCTT-CGATCATGAGCTTCGACCTAAGTCTAACC 610 Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241 | | |||||||||| ||||||||||||||||| | ||||| || |||| ||| || Sbjct 609 CAATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTTCGATTT 550 Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGT 270 ||| | |||||||||| |||||||| Sbjct 549 TGCACAGTGCTGTGTTTTTAATAAACAGT 521 >seq40952 Length=1454 Score = 232 bits (256), Expect = 1e-58 Identities = 221/279 (79%), Gaps = 14/279 (5%) Strand=Plus/Plus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58 ||| | |||||||||| | |||| ||||||||| |||||| || ||||||| || || Sbjct 318 TACACAGCATCTTCACTGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGTGGCC 377 Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 | | ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 378 A--TGGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 435 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTA 178 |||||||||||||||||||||||||||| ||||||| | | ||||| | ||| Sbjct 436 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC----TCCCTA 491 Query 179 A-CAGATCCCC-----TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTC 232 | | | |||| |||||||||| |||||||||||| |||| | ||||| || || Sbjct 492 AGGATAACCCCATCAATTAACCTTCCGGCACCGGGCAGGTGTCACACCGTATACGTCATC 551 Query 233 TTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTC 271 |||||| || ||| | |||||||||| ||||||||| Sbjct 552 TTGCGATTTTGCACAGTGCTGTGTTTTTAATAAACAGTC 590 >seq156799 Length=475 Score = 187 bits (206), Expect = 5e-45 Identities = 136/156 (87%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG--TGCCC 58 ||| | ||||||| || | |||| ||||||||| |||||| || ||||||| || || Sbjct 160 TACACTGCATCTTAACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGTGGCC 101 Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118 | || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 100 A--TCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 43 Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154 |||||||||||||||||||||||||||| ||||||| Sbjct 42 GACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTT 7 >seq507996 Length=356 Score = 183 bits (202), Expect = 6e-44 Identities = 210/288 (73%), Gaps = 37/288 (13%) Strand=Plus/Minus Query 102 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA 161 |||||||||||||||||||||||||||||||||||||||||| || ||||||| | || Sbjct 356 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCAATT-- 299 Query 162 CTGCTTCGATTGCTCTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCC 221 || ||| |||| ||| ||||||||||| |||| ||||||| |||||| | Sbjct 298 -TGAGTCG------CTAAACCCTCCTCTTAACCTTCCGGCACTGGGCAGGTGTCAGCCCA 246 Query 222 TATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCT 281 ||||||||| ||| | ||||||| | ||||||||||||| |||||||| ||| | || Sbjct 245 TATACATCGCCTTTCAGCTTAGCATAGACCTGTGTTTTTGCTAAACAGTTGCTCGAATCT 186 Query 282 ATTCTCTGCGGCC--------------------TGT--------CATAGACAGGCACCCC 313 ||| |||||||| ||| | | | |||||||| Sbjct 185 CTTCACTGCGGCCATCAAAAGCTTTAGAACGCGTGTTTCTATTACCTTTAATGGCACCCC 126 Query 314 TTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTT 361 ||||||| ||||||||||| |||||||| |||||||||| | | |||| Sbjct 125 TTCTCCCGAAGTTACGGGGCCATTTTGCAGAGTTCCTTAGCGAGAGTT 78 >seq12756 Length=1019 Score = 86.0 bits (94), Expect = 1e-14 Identities = 117/160 (73%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 138 GCCGTTTACTGGGGCTTAAGTTCACT-GCTTCGA--TTGCTCTAACAGATCCCCTTAACC 194 ||||||||| ||||||| | ||| ||||||| | |||||| | | |||||| Sbjct 1019 GCCGTTTACCGGGGCTTC-GATCATGAGCTTCGACCTAAGTCTAACCCAATCAATTAACC 961 Query 195 TTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGT 254 |||| ||||||||||||||||| | ||||| || |||| ||| || ||| | |||| Sbjct 960 TTCCGGCACCGGGCAGGCGTCACACCGTATACGTCATCTTTCGATTTTGCACAGTGCTGT 901 Query 255 GTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC 294 |||||| |||||||| || || ||||||||| || Sbjct 900 GTTTTTAATAAACAGTTGCAGCCACCATTTCTCTGCGACC 861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056817066752