Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq12755 199 8e-49
seq306624 183 6e-44
seq196718 127 4e-27
seq156890 114 3e-23
seq156888 104 5e-20
seq186018 98.7 2e-18
seq156889 86.0 1e-14
seq12758 80.6 5e-13
seq40952 77.0 6e-12
>seq12755
Length=1866
Score = 199 bits (220), Expect = 8e-49
Identities = 181/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171
||||| ||| | ||| |||||||||||||||||| ||||| ||||||||||||||| |
Sbjct 1322 GGACAATGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG 1381
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231
| ||| | | ||||| || ||||| | || | ||| ||||||||||| | |
Sbjct 1382 TACGAAGGTGCGCTCAGACCGGTCGGAAATCGGTCGTAGAGTATAAAGGCAAAAGCGCGC 1441
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|| ||||||| |||| |||||| |||||| |||||||| || |||| |||||||| |||
Sbjct 1442 TTAACTGCGAGACCCACAAGTCGAGCAGGTACGAAAGTAGGTCTTAGTGATCCGGTGGTT 1501
Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| |||||| |||| |||||| ||||||||||| ||| |||||||||
Sbjct 1502 CTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCTGGGGATA 1549
>seq306624
Length=388
Score = 183 bits (202), Expect = 6e-44
Identities = 169/214 (79%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 126 GGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCT 185
||| ||||||||||||| |||||||||| |||||||||||||||| | |||| | ||||
Sbjct 15 GGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGCTTCTAAAGGTTCCCT 74
Query 186 CAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACC 245
||| | ||| |||| |||| | ||||||| |||| ||||| | ||||||| || ||
Sbjct 75 CAGTACGCTTGGTAACCGTGCGTAGAGTGCAATGGCATAAGGGAGCTTGACTGAGAGACA 134
Query 246 CTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGC 305
|| ||| | |||| |||||||| | || || |||||||| ||| | | |||||| |||
Sbjct 135 TACAGGTCGATCAGGTACGAAAGTAGAGCATAGTGATCCGGTGGTTCCGCATGGAAGGGC 194
Query 306 CGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| |||||| | ||||||||| ||| | |||||||
Sbjct 195 CATCGCTCAAAGGATAAAAGGTACGCCGGGGATA 228
>seq196718
Length=378
Score = 127 bits (140), Expect = 4e-27
Identities = 139/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 155 AAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTG 214
||||||||||||||| || | ||| | || || || ||| | | | || ||||
Sbjct 1 AAAGAGTAACGGAGGAGCACGAAGGTTGGCTAAGTACGGTCGGACATCGTACGGTTAGTG 60
Query 215 CAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGC 274
||| |||| ||| | || ||||||| || || ||| |||||| |||||||| || |
Sbjct 61 CAATGGCATAAGCCAGCTTAACTGCGAGACAGACACGTCGAGCAGGTACGAAAGTAGGTC 120
Query 275 TTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGG 334
|| |||||||| ||| |||||||||| |||| |||||| ||||||||||| ||| | ||
Sbjct 121 ATAGTGATCCGGTGGTTCTGAATGGAAGGGCCATCGCTCAACGGATAAAAGGTACTCCGG 180
Query 335 GGATA 339
|||||
Sbjct 181 GGATA 185
>seq156890
Length=341
Score = 114 bits (126), Expect = 3e-23
Identities = 136/183 (74%), Gaps = 1/183 (1%)
Strand=Plus/Plus
Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171
|||||||| | | ||| |||||||||||||||||| ||||||||||||||||||||| |
Sbjct 160 GGACAGTGCCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCCAAAGAGTAACGGAGGAG 219
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231
| | ||| | || | | || ||| | | || | ||||||| |||| || | |
Sbjct 220 CACGAAGGTTGGCTAAACACGGTCGGACATCGTGAGGTTAGTGCAATGGCATAA-GCCGC 278
Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291
|| ||||||| | |||||| |||||| ||||||| || | || |||||||| |||
Sbjct 279 TTAACTGCGAGAATGACAAGTCGAGCAGGTACGAAAGCAGGTCATAGTGATCCGGTGGTT 338
Query 292 CTG 294
|||
Sbjct 339 CTG 341
>seq156888
Length=1118
Score = 104 bits (114), Expect = 5e-20
Identities = 111/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171
||||||||| | ||| |||||||||||||||||| ||||| ||||||||||||||| |
Sbjct 972 GGACAGTGTATGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG 1031
Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231
| ||| | | ||||| || ||||| | || | ||| ||||||||||| | |
Sbjct 1032 TACGAAGGTGCGCTCAGACCGGTCGGAAATCGGTCGTAGAGTATAAAGGCAAAAGCGCGC 1091
Query 232 TTGACTGCGACACCCTCAAGTCTAGCA 258
|||||||||| || || ||| ||||
Sbjct 1092 TTGACTGCGAGACAGACACGTCGAGCA 1118
>seq186018
Length=271
Score = 98.7 bits (108), Expect = 2e-18
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 248 CAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCG 307
|| ||| |||||| |||||||| || | || |||||||| ||| |||||||||| ||||
Sbjct 2 CACGTCGAGCAGGTACGAAAGTAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCA 61
Query 308 TCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||||| ||||||||||| ||| | |||||||
Sbjct 62 TCGCTCAACGGATAAAAGGTACTCCGGGGATA 93
>seq156889
Length=532
Score = 86.0 bits (94), Expect = 1e-14
Identities = 93/121 (77%), Gaps = 3/121 (2%)
Strand=Plus/Plus
Query 59 ATACTACCCCTGTTGTATTGGATTTCTAAC-CGGACGACGTATAACCGTTGACGGGACAG 117
|||| |||| ||| || ||| ||||||| | | | | ||| ||||| ||||||
Sbjct 414 ATACCACCCTTGTAGTTTTGATGTTCTAACTCTGGCCCCTTATCGGGGTTGA--GGACAG 471
Query 118 TGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAA 177
|| | | ||| |||||||||||||||||| ||||||||||||||||||||| || | ||
Sbjct 472 TGCCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCCAAAGAGTAACGGAGGAGCACGAA 531
Query 178 G 178
|
Sbjct 532 G 532
>seq12758
Length=1039
Score = 80.6 bits (88), Expect = 5e-13
Identities = 103/137 (75%), Gaps = 5/137 (4%)
Strand=Plus/Plus
Query 44 GGAGCCGCTGTTGGGATACTACCCCTGT-TGTATTGGAT-TTCTAACCGGACGACGTATA 101
|||||| || ||| |||| |||| ||| || | ||| |||||||| | |||| |
Sbjct 906 GGAGCCACTCTTGAAATACCACCCTTGTATGCGT--GATGTTCTAACCTAGGGCCGTA-A 962
Query 102 ACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGT 161
||| |||||| |||| | ||| |||||||||||||||||| ||||| |||||||
Sbjct 963 TCCGGCCTGGGGACACTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGT 1022
Query 162 AACGGAGGCGCCCAAAG 178
|||||||| || | |||
Sbjct 1023 AACGGAGGAGCACGAAG 1039
>seq40952
Length=1454
Score = 77.0 bits (84), Expect = 6e-12
Identities = 57/67 (85%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171
|||||||| | | ||| |||||||||||||||||| ||||| ||||||||||||||| |
Sbjct 136 GGACAGTGCCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG 77
Query 172 CCCAAAG 178
| | |||
Sbjct 76 CACGAAG 70
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 977237468352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |