Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq312118 632 4e-179 seq127494 367 3e-99 seq190646 327 2e-87 seq142421 295 1e-77 seq458515 201 2e-49 seq190645 196 1e-47 seq443255 183 6e-44 seq268572 163 6e-38 seq190644 161 2e-37 seq142356 141 2e-31 seq142355 107 4e-21 seq142420 104 5e-20 seq312117 77.0 7e-12 >seq312118 Length=428 Score = 632 bits (700), Expect = 4e-179 Identities = 362/367 (99%), Gaps = 2/367 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 423 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 366 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 365 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 306 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 305 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 246 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 CCAACTAGCTAATCCCACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 186 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 185 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTATCAG 126 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTCTCAAGAGAAGCAAGCTTCTCTCTA 360 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 125 GCAGATTCCTAGGTATTACTCACCCGTCCGCCGCTCTCAAGAGAAGCAAGCTTCTCTCTA 66 Query 361 CCGCTCG 367 ||||||| Sbjct 65 CCGCTCG 59 >seq127494 Length=1980 Score = 367 bits (406), Expect = 3e-99 Identities = 286/336 (85%), Gaps = 4/336 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| | ||| ||||||| |||||||||||||| |||||||||||| |||| ||| Sbjct 332 CTTTACAACCAAAAGGCCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGGTTTCCCCC 275 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| || | Sbjct 274 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCCGGGCCGTGTCTCAGTCCCGG 215 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| ||| |||||||||| |||| ||| ||||| || Sbjct 214 TGTGGCTGATCATCCTCTCAGACCAGCTACAGATCGTCGCCATGGTAGGCCTTTACCCCA 155 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||| |||||||||||||| ||||||||||| |||||| | || || | ||| ||| Sbjct 154 CCATCTAGCTAATCCGACTTAGGCTCATCTAATAGCG-AGAGCAGTAAACTGCCC-CCTT 97 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 ||||||||||| |||||||||||||| |||||| | ||||||||||||| || Sbjct 96 TCTCCCGTAGGTCGTATGCGGTATTAATACGAGTTTCCCCGTGCTATCCCCCACTACTAG 37 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 | ||||||||| | |||||||||||||||||||||| Sbjct 36 GTAGATTCCTAAGTATTACTCACCCGTCCGCCGCTC 1 >seq190646 Length=382 Score = 327 bits (362), Expect = 2e-87 Identities = 256/302 (85%), Gaps = 9/302 (3%) Strand=Plus/Minus Query 58 CCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 117 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 CCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 323 Query 118 CAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACC 177 ||||||| ||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct 322 CAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCTCTTACC 263 Query 178 TCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAG---GCCCGAAG-GTCC 233 |||||||| ||||||||| || | ||||||||| | ||| || | |||| | || Sbjct 262 TCACCAACAAGCTAATCCCACTTGGGCTCATCTAGTCGCGAGAGCTTTCAAGAAGAGGCC 203 Query 234 CCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCA 293 || ||||| |||||||| |||||||||||||||| ||||||| | ||| |||||| Sbjct 202 CC--CTTTCACCCGTAGGTCGTATGCGGTATTAGCAGTCGTTTCCAACTGTTGTCCCCCT 145 Query 294 CTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT---CTCAAGAGAAGCAAG 350 | || ||||||||||| | ||||||||||||||||||||||| | | ||| |||||| Sbjct 144 CGACTAGGCAGATTCCCAAGCATTACTCACCCGTCCGCCGCTCGACGCCAGAATAGCAAG 85 Query 351 CT 352 || Sbjct 84 CT 83 >seq142421 Length=429 Score = 295 bits (326), Expect = 1e-77 Identities = 184/195 (94%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct 193 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCAT-GGCTGCATCAGGCTTTCGCCC 136 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 135 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 76 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 75 TGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTACCTCA 16 Query 181 CCAACTAGCTAATCC 195 ||||||||||||||| Sbjct 15 CCAACTAGCTAATCC 1 >seq458515 Length=281 Score = 201 bits (222), Expect = 2e-49 Identities = 173/210 (82%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAG-ACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||||| || ||| || | | |||||||||| ||||||||||||||| ||||| Sbjct 13 TTTACAATCCATAGGACCGTCATCCTG-CACGCGGCAT-GGCTGGATCAGGCTTGCGCCC 70 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct 71 ATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 130 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||| |||||||| | ||| ||||| | |||||| |||| |||||| | Sbjct 131 TGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGTCTTGGTAAGCCGTTACCTTA 190 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCT 210 ||||||| ||||| ||| | |||||||| Sbjct 191 CCAACTAACTAATGGGACGCATGCTCATCT 220 >seq190645 Length=826 Score = 196 bits (216), Expect = 1e-47 Identities = 182/223 (82%), Gaps = 10/223 (4%) Strand=Plus/Minus Query 154 TCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATC-TGA 212 |||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||| Sbjct 826 TCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCCACCTGGGCTAATCCTGA 767 Query 213 TAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCC 272 ||| |||||||||||||||| |||| ||| || |||||||||||||| | Sbjct 766 C-GCGAGAGGCCCGAAGGTCCCCCTCTTTGCTCCGAAGAGATTATGCGGTATTAGCTATC 708 Query 273 GTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCC 332 |||||| | |||||||||||| | || | ||||| |||||||||||||||||||||| Sbjct 707 GTTTCCAATAGTTATCCCCCACATCAGGGTATATTCCCAGGCATTACTCACCCGTCCGCC 648 Query 333 GCTC-TCA--AGAG-AAGCAAGC-TTCTCTC---TACCGCTCG 367 |||| ||| | || |||||||| |||| || ||||||||| Sbjct 647 GCTCGTCAGCAAAGAAAGCAAGCTTTCTTTCTGTTACCGCTCG 605 >seq443255 Length=443 Score = 183 bits (202), Expect = 6e-44 Identities = 169/210 (80%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAG-ACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||||| || ||| || | | |||||||||| |||||| |||| ||| || || Sbjct 379 TTTACAATCCATAGGACCGTCATCCTG-CACGCGGCAT-GGCTGGTTCAGACTTGCGTCC 322 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| |||||||||| |||||||||||||||||||||||||| |||||||||||| |||| Sbjct 321 ATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 262 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||| |||||||| | ||| ||||| | |||||| |||| |||||| | Sbjct 261 TGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGTCTTGGTAAGCCGTTACCTTA 202 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCT 210 ||||||| ||||| ||| | |||||||| Sbjct 201 CCAACTAACTAATGGGACGCATGCTCATCT 172 >seq268572 Length=1256 Score = 163 bits (180), Expect = 6e-38 Identities = 97/99 (98%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 97 CTTTACAATCCGAAGACCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGCTTTCGCCC 40 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC 99 ||||||||||||||||||||||||||||||||||||||| Sbjct 39 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTC 1 >seq190644 Length=416 Score = 161 bits (178), Expect = 2e-37 Identities = 167/213 (78%), Gaps = 12/213 (6%) Strand=Plus/Minus Query 161 CTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAA 220 ||||||||||||||||||||||||||||||||||| || | ||| |||| | ||| | Sbjct 416 CTTGGTGAGCCATTACCTCACCAACTAGCTAATCCCACTTGGGCCAATCTAAAGGCGAGA 357 Query 221 GGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGA 280 | |||||| |||| |||| |||||| |||||||||||||| ||||||| | Sbjct 356 G--CCGAAG--CCCC--CTTTGGTCCGTAGACATTATGCGGTATTAGCAGTCGTTTCCAA 303 Query 281 ACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC-TCA 339 ||| |||||||| | ||||| |||| | |||||||||||||||||||||||| ||| Sbjct 302 CTGTTGTCCCCCACCTCAAGGCATGTTCCCAAGCATTACTCACCCGTCCGCCGCTCGTCA 243 Query 340 --AGAGAAGCAAGCTTCTCTC---TACCGCTCG 367 | || |||||||| ||||| ||||||||| Sbjct 242 GCAAAGTAGCAAGCTACTCTCTGTTACCGCTCG 210 >seq142356 Length=252 Score = 141 bits (156), Expect = 2e-31 Identities = 94/102 (92%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| ||||| ||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct 100 CTTTACAACCCGAAAGCCTTCTT-CACACACGCGGCAT-GGCTGCATCAGGCTTGCGCCC 43 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 102 ||||| |||||||||||||||||||||||||||||||||||| Sbjct 42 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 1 >seq142355 Length=845 Score = 107 bits (118), Expect = 4e-21 Identities = 74/81 (91%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct 79 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCAT-GGCTGCATCAGGCTTGCGCCC 22 Query 61 ATTGTCCAATATTCCCCACTG 81 ||||| ||||||||||||||| Sbjct 21 ATTGTGCAATATTCCCCACTG 1 >seq142420 Length=711 Score = 104 bits (114), Expect = 5e-20 Identities = 73/81 (90%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| |||||||||||||| ||||| |||||| |||| ||| Sbjct 79 CTTTACAACCCGAAGGCCTTCTT-CACACACGCGGCAT-GGCTGCATCAGGGTTTCCCCC 22 Query 61 ATTGTCCAATATTCCCCACTG 81 ||||| ||||||||||||||| Sbjct 21 ATTGTGCAATATTCCCCACTG 1 >seq312117 Length=200 Score = 77.0 bits (84), Expect = 7e-12 Identities = 62/73 (85%), Gaps = 3/73 (4%) Strand=Plus/Minus Query 283 GTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC-TCA-- 339 |||||||||| | || ||||||| ||||||||||||||||||||||||||||| ||| Sbjct 194 GTTATCCCCCTCGACTGGGCAGATCCCTAGGCATTACTCACCCGTCCGCCGCTCGTCACC 135 Query 340 AGAGAAGCAAGCT 352 || |||||||| Sbjct 134 TCAGGAGCAAGCT 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1066366618560