Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq517049 109 8e-22 seq291343 77.0 5e-12 >seq517049 Length=801 Score = 109 bits (120), Expect = 8e-22 Identities = 74/83 (89%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 179 GGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCCCGCTTCGG 238 ||||||||||||| ||||| ||||||||||||||||||| |||||||||||| ||||| Sbjct 801 GGTTGGTCAGGTATTTTTCGAGGTAGACCATCGGGTTGCTGAACCAGGCGCCGGCTTCTT 742 Query 239 AGCGAGTCTGCTTGGCCGCTTCG 261 ||| ||||||||||| |||||| Sbjct 741 CGCGGGTCTGCTTGGCGGCTTCG 719 >seq291343 Length=2727 Score = 77.0 bits (84), Expect = 5e-12 Identities = 108/152 (71%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 58 CCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGG 117 || || || || |||||||| | ||| || ||||||||||| |||| || ||||| || Sbjct 1706 CCTGGAGCGGGTGCTTCTTCAACTACTTTTTGGTGACGACGCTGCATAGAACAATCACGT 1765 Query 118 TCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGT 177 || || | || | || | || ||||| || | | | ||| ||||| | |||||| Sbjct 1766 TCACCTAAATGCACAGCATTACCTTGGCCATCAGCTAAAATTTGTACTTCGATATGACGT 1825 Query 178 GGGTTGGTCAGGTACTTTTCCAGGTAGACCAT 209 ||||| ||||| || |||| ||| ||||| Sbjct 1826 GGGTTTTCAAGGTATTTCTCCATGTAAACCAT 1857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 732253170740