Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq467240 190 8e-46 seq472303 163 1e-37 seq502117 138 4e-30 seq514512 123 9e-26 seq482119 122 3e-25 seq512633 107 7e-21 seq517071 105 3e-20 seq464981 96.9 1e-17 >seq467240 Length=1177 Score = 190 bits (210), Expect = 8e-46 Identities = 330/477 (69%), Gaps = 7/477 (1%) Strand=Plus/Plus Query 100 TTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTA 159 |||||| |||||||| || | ||| |||| || | || || || | |||||| Sbjct 368 TTCTTT-TTGGCGTTTTCACTTAACAGACGCTCACGTGCTTGCGTTGCAGCAAACATGTA 426 Query 160 CTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGT 219 ||||||||||| || | | | |||||||| ||||| || | || ||||||||||| Sbjct 427 TTCGTCGTAGTTACCTGAATAAATACGCAGCTCACCGTAATCAATATCGGCCATGTGGGT 486 Query 220 ACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAA---CG 276 ||| || ||| | ||||| ||||| || || || || ||||| | || || || Sbjct 487 ACAAACCGAGTTTAAAAAGTGGCGGTCATGCGAAATTATTATCAT---GGTGCAATCGCG 543 Query 277 CTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTC 336 ||| ||| | || ||| | ||| ||| || | || ||||||| || || ||||| Sbjct 544 TTGGTTCAATACATCTTCTAACCACTTGATTGTATAAATATCCAAGTTATTAGTAGGTTC 603 Query 337 GTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTT 396 ||||| | || | ||||||||| |||||||| |||| || | | |||||||| || Sbjct 604 ATCGAGTAGCATTATTTCAGGATCTGAAAACAGTACCTGTGCTAAAAGTACACGCAATTT 663 Query 397 CCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACC 456 | || || | | ||| ||| || || |||| ||||| | |||||| | ||| Sbjct 664 AAAACCTGGCGCAATTTCTGACATAGGGCCATAGTGTTGCTCAGTAGCAATACCTACACC 723 Query 457 CAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGT 516 | | || |||||| || ||||| || | ||| |||||||| ||||| || || || Sbjct 724 TAATAACAACTCACCCGCTTTAGATTCTGCAGAGTAACCGTCCATTTCGGCAAATTCAGT 783 Query 517 TTCCAGCTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAAT 573 ||||| ||||| || |||||| || ||||||||||||| | | |||||||| Sbjct 784 TTCCAAATCGGCTACTTTCATGCCATCCGCTTCGCTCATTTCAGCTAAAGAGTAAAT 840 >seq472303 Length=430 Score = 163 bits (180), Expect = 1e-37 Identities = 257/367 (70%), Gaps = 1/367 (0%) Strand=Plus/Plus Query 154 CATGTACTCGTCGTAGTTGCCC-GGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCA 212 |||||| || || ||||| ||| ||| | | ||| || || ||| | || |||||||||| Sbjct 46 CATGTAGTCATCATAGTTACCCTGGGTAAACGCGTAGTTCACCGAAATCAAGGTCAGCCA 105 Query 213 TGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGG 272 |||| ||||| || ||||| | ||| || || || || |||||||| | ||| || Sbjct 106 TGTGAGTACAAACACTGTTTAAGAAATGGCGATCATGCGAGATGATTACCATTGTACTTT 165 Query 273 AACGCTGGGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCG 332 ||| | | || | | ||| | |||| || || ||| ||||||| || || | Sbjct 166 GACGTGCGTTTAGTGTTTCTTCTAACCAGTCAATCGTTGCGATATCCAAGTTATTCGTTG 225 Query 333 GTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCA 392 ||||||| || | | | || ||||| || || || || || || || | |||||| | Sbjct 226 GTTCGTCAAGTAGTAAGATATCTGGATCAGAGAATAGTGCTTGTGCTAGTAGTACACGTA 285 Query 393 GCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCA 452 | ||||| || || | ||||||||||| | ||| | || || | || ||||| | Sbjct 286 GTTTCCAACCTGGAGCAACTTCGCTCATTAGGCCGTAATGTAATTCTACTGGGATACCAA 345 Query 453 GACCCAGCAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACT 512 ||| | || || ||||| ||||| ||||| || ||||||||||||||||| || || | Sbjct 346 CACCGATTAGTAGTTCACCCGCACGAGATTCAGCTGTGTAGCCGTCCATCTCTGCAAATT 405 Query 513 CGGTTTC 519 | |||| Sbjct 406 CACTTTC 412 >seq502117 Length=672 Score = 138 bits (152), Expect = 4e-30 Identities = 270/397 (68%), Gaps = 4/397 (1%) Strand=Plus/Plus Query 164 TCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGTACAC 223 ||||| || || ||| | | || | |||||||| || | |||||||||||||||||| Sbjct 111 TCGTAATTACCTGGGTAAACACGTAATTCGCCGTAATCGATGTCAGCCATGTGGGTACAA 170 Query 224 ACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTGGGTC 283 || ||| | |||||| | |||||| || ||||||||||| || ||| | | | Sbjct 171 ACAGAGTTTAAGAAGTGTCTGTCGTGCGAAATGATGATCATGGTGCATTTACGTTTGTTT 230 Query 284 AGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGC 343 || || ||| ||| | ||||| | || ||||||| |||||| ||||||||||| Sbjct 231 AGCTCTGTTGCCAACCAACTAATGGTATGAATATCCAAGTTGTTGGTAGGTTCGTCGAGT 290 Query 344 AACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCC 403 |||| | || || | | |||| || || || | ||| || |||| ||||| || Sbjct 291 AACAAAATGTCTGGGTTAGCGAACAAAGCTTGTGCTAACAACACGCGCAATTTCCAACCT 350 Query 404 GGGGACACTTCGCTCATCGGACCGAAGTG--CTGCTCCAGCGGAATACCCAGACCCAGCA 461 || | || | ||| ||| ||||| || | | ||| || | | || Sbjct 351 GGAGCAACCTGTTGCATTAAACCAAAGTGAAATGACTCTTC--AATGCCGGCTTCTAACA 408 Query 462 GCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCA 521 | | ||||| || || ||| || |||||||||||||| || ||||||| |||| | Sbjct 409 GAATTTCACCAGCGCGACTTTCAGCTGTGTAGCCGTCCATTTCCGCGAACTGACTTTCTA 468 Query 522 GCTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTC 558 | ||| | || |||||||||||| ||| ||||||| Sbjct 469 GGTCGCCTACTCGCATGCCGTCTTCGTCGGTCATTTC 505 >seq514512 Length=372 Score = 123 bits (136), Expect = 9e-26 Identities = 218/313 (70%), Gaps = 5/313 (2%) Strand=Plus/Minus Query 140 TGGGTCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGG-CGCAGCTCGCCGTA 198 || || ||| | |||||||| ||||||||||| || ||||| | | ||||| ||||| || Sbjct 312 TGTGTTGCCGCCGTCATGTATTCGTCGTAGTTACCAGGGAAAAAGACGCAGTTCGCCATA 253 Query 199 GTCCAGGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGAT 258 || | || |||||||| | ||| || || | ||| |||||||| || |||||||| Sbjct 252 ATCGATATCTGCCATGTGCGAACAGACTGAATTTAAGAAATGACGGTCATGCGAGATGAT 193 Query 259 G-ATCATCAGGCTGGAACGCTGGGTCAGGAT--ATTTTCCAGCCAGCGGATGGTGTTGAT 315 | ||| | ||| || | || | |||| | ||| || || || | ||| Sbjct 192 TTACCATAGTACATTGACG-TGCTTTTTAATTCAGTTTCTAACCAACGAATAGTATCGAT 134 Query 316 GTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTG 375 |||||||| ||||| || || ||||| |||| | || |||| || || ||| | || Sbjct 133 GTCCAAGTTATTGGTTGGCTCATCGAGTAACATGATGTCTGGATTTGAGAAAAGCACTTG 74 Query 376 GGCCAGCAATACACGCAGCTTCCAGCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTG 435 || || |||||||| || ||||| || || | | || ||| |||||| | || || Sbjct 73 TGCTAGTAATACACGTAGTTTCCAACCTGGTGCAATGTCTGACATTGGACCGTAATGTTG 14 Query 436 CTCCAGCGGAATA 448 ||| || |||||| Sbjct 13 CTCAAGTGGAATA 1 >seq482119 Length=545 Score = 122 bits (134), Expect = 3e-25 Identities = 177/241 (73%), Gaps = 13/241 (5%) Strand=Plus/Minus Query 28 CTTGCTTTGGCTTTTCGAGGCGTTCGCCGAGAAACG-GCTTGACGAAGGATTTGCAGCTC 86 |||| ||| ||||| || ||||| || |||||||| ||| ||||| | |||| | || Sbjct 235 CTTG-TTTAGCTTTA-GATGCGTTGGCAGAGAAACGTGCT--ACGAACG-TTTGTAATTC 181 Query 87 GGTGATCTGCGCCTTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGA---CTGGG 143 | || ||||| || ||||||||||||||| || | | || || || ||| | Sbjct 180 AGCTATTTGCGCTTT-TTTCTTGGCGTTGTCACTCATTAAACGTTCACGTGATTGCTGTG 122 Query 144 TCGCCACGGTCATGTACTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCA 203 |||| ||||||| |||||||||||||| ||||||| || || || ||||| || | Sbjct 121 CAGCCA---TCATGTATTCGTCGTAGTTGCCAGGGAACACTCGTAGTTCACCGTAATCTA 65 Query 204 GGTCAGCCATGTGGGTACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCA 263 |||||||||||| |||||||| ||| | ||| | |||||| || || || || |||| Sbjct 64 AGTCAGCCATGTGAGTACACACTGAGTTTAAGAAATAACGGTCATGCGAAATAATAATCA 5 Query 264 T 264 | Sbjct 4 T 4 >seq512633 Length=677 Score = 107 bits (118), Expect = 7e-21 Identities = 213/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 296 AGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTCGAGCAACAGCACTTCA 355 |||||| || || | || ||||||| ||||| ||||| ||||| | || | ||| Sbjct 625 AGCCAGGTAATTGTATGAATATCCAAGTTATTGGTAGGTTCATCGAGTAGCAAAATATCA 566 Query 356 GGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCAGCCCGGGGACAC-TTC 414 || | | ||||| |||||| || | | ||||| || |||||||| || | || || Sbjct 565 GGGTTTGCAAACAACGCCTGTGCTAAAAGCACACGTAGTTTCCAGCCTGGCGCTACGTTT 506 Query 415 GCTCATCGGACCGAAGTGC--TGCTCCAGCGGAATACCCAGACCCAGCAGCAGCTCACCG 472 || ||| || | || | || | || |||||| | |||| | || | Sbjct 505 GC-CATTAAGCCATAATGAAATTCTTTATCG--ATACCCGCTTCTAGCAAAATTTCTTCA 449 Query 473 GCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCGGCCACG 532 || ||| ||| || ||||| |||||||| || || || || |||| ||||| || || Sbjct 448 GCGCGGCTTTCTGCCGTGTAACCGTCCATTTCTGCAAATACGCTTTCTAGCTCAGCTACT 389 Query 533 GCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACGCTCGGCCTTG 592 |||||| || |||||||||||||| |||| |||||||||| || ||||| ||| Sbjct 388 TTCATGCCATCGTCTTCGCTCATTTCTGGCAAAGAGTAAATACGTTCGCGCTCTTGCTTT 329 Query 593 ACCTTCCACAG 603 || ||||| || Sbjct 328 ACTTTCCAAAG 318 >seq517071 Length=344 Score = 105 bits (116), Expect = 3e-20 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 521 AGCTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCA 580 || ||||| ||||||||||||||| |||| |||||||||||||||| || || | ||| Sbjct 344 AGTTCGGCAACGGCCATGCCGTCTGCTTCAGTCATTTCCGGCAGCGAATAGATGCGATCG 285 Query 581 CGCTCGGCCTTGACCTTCCACAG 603 ||||||||||||||||||||||| Sbjct 284 CGCTCGGCCTTGACCTTCCACAG 262 >seq464981 Length=461 Score = 96.9 bits (106), Expect = 1e-17 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 467 TCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTCCAGCTCG 526 ||||| || || ||||| || ||||| |||||||| || || || || | || ||||| Sbjct 30 TCACCTGCGCGAGATTCAGCAGTGTAACCGTCCATTTCAGCAAATTCCATCTCAAGCTCA 89 Query 527 GCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATCACGCTCG 586 | || || ||||||||||| |||||||| || | || ||||||| ||||||||| Sbjct 90 GAGACTTTGATTCCGTCTTCTTCACTCATTTCAGGTAAAGAATAAATACGATCACGCTCT 149 Query 587 GCCTTGACCTTCCACA 602 |||||||| ||||| Sbjct 150 TGCTTGACCTCCCACA 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1871403159192