Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq392608 331 3e-88
seq257960 232 2e-58
seq337199 221 4e-55
seq362979 208 3e-51
seq337200 165 3e-38
seq351919 158 4e-36
seq266509 156 2e-35
seq266510 150 6e-34
seq35889 138 4e-30
>seq392608
Length=818
Score = 331 bits (366), Expect = 3e-88
Identities = 358/469 (76%), Gaps = 19/469 (4%)
Strand=Plus/Minus
Query 135 ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTC 194
|||||||||||||||||||||||||||| || |||||| | |||||||||||||||||
Sbjct 486 ACGCTGCACCTAAATGCATTTCGGGGAGTACGAGCTATTTCCGAGTTTGATTGGCCTTTC 427
Query 195 ACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCG 254
||||||| |||||| ||||||| | |||||||| | | |||||||||||||||
Sbjct 426 ACCCCTACCCACAGATCATCCCAAGACTTTTCAACGTCA-ACGGTTCGGTCCTCCACTTT 368
Query 255 GTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTG 314
|| ||||| ||||||||||| |||||| |||||||| | |||| |||| |
Sbjct 367 GTGTTACCAAAGCTTCAACCTGTCCATGGGTAGATCACACGGTTTCGCGTCTAACACTAC 308
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC---CCCACACGGGTTAAC 371
||| | |||||||||| |||||||||||||||||| | | | || ||| |
Sbjct 307 TGACTAAAGCGCCCTATTCAGACTCGCTTTCGCTACGGATCCGTGGCTTAACCACTTATC 248
Query 372 CTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTAC 431
|| || | ||||| |||||| ||||||||| | |||||||||||||||||||
Sbjct 247 CTTGCCA-GCAACGTTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACC---CCA 192
Query 432 CTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTC 491
||||| | |||||||| | ||||| || ||||||||||| |||||||||||
Sbjct 191 CTAAAGG--------GCTCCGACCGCTTGTAAGCGTATGGTTTCAGGATCTATTTCACTC 140
Query 492 C--CCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
| || ||| ||||||||||||||||||||||||| || | ||||||||| | |
Sbjct 139 CGTTATTCA-CGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCA 81
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598
||||||||||| |||| ||| ||||||||||| ||||| || |||||
Sbjct 80 GGAGTATTTAGCCTTAGCGGATGGTCCCGCCAAATTCAGACAGGATTTC 32
>seq257960
Length=1007
Score = 232 bits (256), Expect = 2e-58
Identities = 270/359 (75%), Gaps = 13/359 (4%)
Strand=Plus/Minus
Query 233 AGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCAC 292
||| |||||||||||||| | | |||| | ||||||||||||||||| ||||||||
Sbjct 1007 AGTCGGTTCGGTCCTCCAGTTGATGTTACTCAACCTTCAACCTGCCCATGGCTAGATCAC 948
Query 293 TTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGG 352
| | ||||||||| | | ||| ||| | |||| | || ||||| |||| ||||||
Sbjct 947 TCGGTTTCGGGTCTACACCTTGCAACTAA-ACGCGCAGTTAACACTCGGTTTCCCTACGG 889
Query 353 CTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAG 412
|| | | | || |||||||||| ||| || | || |||| | | |||| | ||||||
Sbjct 888 CTCCGCTATTCGC-TTAACCTCGCTACAAAATGTAAG-TCGCTGACCCATTATACAAAAG 831
Query 413 GCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGT 472
| |||| ||||| ||| | | || | ||||| || | ||||| | | | |||
Sbjct 830 GTACGCAGTCAC--GGTCTCAAGAA-------CCGCTCCCACTGCTTGTACGTATACGGT 780
Query 473 TTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTG 531
||||||| |||||||||||||| | ||||||| |||||| |||||||||||||||||| |
Sbjct 779 TTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGG 720
Query 532 TCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590
| | |||||||||| |||||||||||| ||| || ||||||| ||| ||||| ||
Sbjct 719 TTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAAAC 661
>seq337199
Length=308
Score = 221 bits (244), Expect = 4e-55
Identities = 218/279 (78%), Gaps = 2/279 (1%)
Strand=Plus/Plus
Query 105 CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAA 164
|||||||||||| ||| | | | ||| ||| |||||||| |||||||||||||
Sbjct 10 CAGTGCTCTACCCCCGTAAGTATTCGTCCGAGGCTCTACCTAAATAGATTTCGGGGAGAA 69
Query 165 CCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTT 224
||||||||| | |||||||| ||||||||| |||| ||||| |||||||||| | |||
Sbjct 70 CCAGCTATCTCCCGGTTTGATTAGCCTTTCACTCCTAACCACAAGTCATCCCCTAACTTT 129
Query 225 TCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGA 284
||||| | |||||||||||||||||| | | |||| | ||||||||||| |||||
Sbjct 130 TCAACGTTAGTGGGTTCGGTCCTCCAGTTGATGTTACTCAACCTTCAACCTGCTCATGGC 189
Query 285 TAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTT 344
|||||||| | ||||||||| | | ||| ||| || ||||| || |||||| |||
Sbjct 190 TAGATCACCGGGTTTCGGGTCTATACCTTGCAACT-ATTCGCCCAGTTAAGACTCGGTTT 248
Query 345 CGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAA 383
| |||||||||||| | | |||||||||||| ||| ||
Sbjct 249 CCCTACGGCTACCCTA-ATCGGTTAACCTCGCTACAAAA 286
>seq362979
Length=304
Score = 208 bits (230), Expect = 3e-51
Identities = 193/242 (80%), Gaps = 2/242 (1%)
Strand=Plus/Plus
Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201
|||||||| ||||||||||||||||||||| | | |||||| ||||||||| || |
Sbjct 44 ACCTAAATAGCTTTCGGGGAGAACCAGCTATCTCCCGGCTTGATTAGCCTTTCACTCCGA 103
Query 202 TCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTAC 261
||||| |||||| || || |||||||| || ||| ||||||||||||| | | ||||
Sbjct 104 CCCACAAGTCATCACCGCATTTTTCAACATACGTGTGTTCGGTCCTCCAGTTGATGTTAC 163
Query 262 CCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCA 321
| |||||||||||||||||||||||| | | ||||||||| | | ||| ||| |
Sbjct 164 TCAACCTTCAACCTGCCCATGGATAGATCGCCCGGTTTCGGGTCTATACCCTGCAACT-A 222
Query 322 TACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACAC 381
|||||||||| |||||||||||||||||||| ||| | || ||||||||| || |||
Sbjct 223 AACGCCCTATTAAGACTCGCTTTCGCTACGGCTCCCCTAAAC-GGTTAACCTTGCTACAG 281
Query 382 AA 383
||
Sbjct 282 AA 283
>seq337200
Length=248
Score = 165 bits (182), Expect = 3e-38
Identities = 184/242 (76%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 105 CAGTGCTCTACCTCCGGGAA-GAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGA 163
|||||||||||| || | || || | | |||| |||||||| ||||| |||||
Sbjct 8 CAGTGCTCTACCCCCAATAGTGATACCTGAGGCGCT--ACCTAAATAGCTTTCGAGGAGA 65
Query 164 ACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTT 223
|||||||||| | ||||||||||||||||||||| | ||||| ||||||| || | ||
Sbjct 66 ACCAGCTATCTCCGGGTTTGATTGGCCTTTCACCCCCAGCCACAAGTCATCCGCTAATTT 125
Query 224 TTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGG 283
|||||| | ||| |||||||||||||| | | |||| | |||||||||||||||||
Sbjct 126 TTCAACATTAGTCGGTTCGGTCCTCCAGTTGATGTTACTCAACCTTCAACCTGCCCATGG 185
Query 284 ATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTT 343
|||||||| | ||||||||| | || ||| || ||||| || |||||| ||
Sbjct 186 CTAGATCACCAGGTTTCGGGTCTAATCCCAGCAACT-ATTCGCCCAGTTAAGACTCGGTT 244
Query 344 TC 345
||
Sbjct 245 TC 246
>seq351919
Length=286
Score = 158 bits (174), Expect = 4e-36
Identities = 217/297 (73%), Gaps = 15/297 (5%)
Strand=Plus/Minus
Query 269 TCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCC 328
||||||||||||||| |||||||| | ||||||||| | || ||| || ||| |
Sbjct 286 TCAACCTGCCCATGGCTAGATCACCGGGTTTCGGGTCTAATCCCAGCAACT-ATTCGCGC 228
Query 329 TATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAA 388
|| ||||| |||| |||||||| | | | || ||||||| || || || ||
Sbjct 227 AGTTAACACTCGGTTTCCCTACGGCTCCGCTATTCGC-TTAACCTTGCTACTGAAATTAA 169
Query 389 ACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGC 448
||| | | |||| | ||||||| |||| ||||| | || ||| || ||
Sbjct 168 G-TCGTTGACCCATTATACAAAAGGTACGCAGTCACA--GAAC----AAG-----TCTGC 121
Query 449 TCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTT 507
||| || | ||||| | | | |||||||||| |||||||||||||| | ||||||| |||
Sbjct 120 TCCCACTGCTTGTACGTATACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTT 61
Query 508 TTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564
||| |||||||||||||||||| || | |||||||||| || ||||||||| |||
Sbjct 60 TTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 4
>seq266509
Length=210
Score = 156 bits (172), Expect = 2e-35
Identities = 164/213 (77%), Gaps = 11/213 (5%)
Strand=Plus/Plus
Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447
|| |||| | | |||| | ||||||| |||| |||||| |||| | | || ||
Sbjct 2 AAGTCGCTGACCCATTATACAAAAGGTACGCGGTCACC------CTAATA---AATTAAG 52
Query 448 -CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTAC 505
|||| || | ||||| ||||| |||||||||| |||||||||||||| | ||||||| |
Sbjct 53 GCTCCCACTGCTTGTACGCACACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTC 112
Query 506 TTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
||||| |||||||||||||||||| || | |||||||||| |||||||||||| |||
Sbjct 113 TTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTG 172
Query 566 ACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598
|| ||||||| ||| |||| || |||||
Sbjct 173 GAGGATGGTCCCCCCATCTTCAAACAGGATTTC 205
>seq266510
Length=454
Score = 150 bits (166), Expect = 6e-34
Identities = 162/213 (76%), Gaps = 10/213 (5%)
Strand=Plus/Plus
Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447
|| |||| | | |||| | ||||||| |||| |||||| | ||||| || |
Sbjct 2 AAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCA---AACTAAA------TTTGG 52
Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACT 506
|||| || | ||||| | | |||||||||| |||||||||||||| | ||||||| ||
Sbjct 53 CTCCCACTGCTTGTACGTATGCGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCT 112
Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566
|||| |||||||||||||||||| || | |||||||||| || ||||||||| |||
Sbjct 113 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTTAGTAGTATTTAGCCTTGG 172
Query 567 CGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|| ||||||| ||| ||||| || || |||||
Sbjct 173 AGGATGGTCCCCCCATATTCAGACAAAGTTTCA 205
>seq35889
Length=586
Score = 138 bits (152), Expect = 4e-30
Identities = 159/213 (75%), Gaps = 12/213 (6%)
Strand=Plus/Plus
Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447
|| |||| | | |||| | ||||||| |||| |||||| | | ||| | |
Sbjct 2 AAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC------CAACAAG-----TGGG 50
Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACT 506
|||| || | ||||| | ||| |||||||||| |||||||||||||| | ||||||| ||
Sbjct 51 CTCCTACTGCTTGTACGTACACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCT 110
Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566
|||| |||||||||||||||||| || | |||||||||| ||||||||||| ||||
Sbjct 111 TTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTTGGGAGTATTTAGCCTTAG 170
Query 567 CGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
| |||||| | | ||||| | || |||||
Sbjct 171 ATGATGGTCCACCTATATTCAGTCAAAGTTTCA 203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1808048475648
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