Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq257960 381 1e-103
seq266510 345 1e-92
seq351919 343 4e-92
seq35889 316 5e-84
seq266509 295 2e-77
seq392608 284 3e-74
seq362979 197 3e-48
seq337199 168 2e-39
seq478353 134 3e-29
seq337200 134 3e-29
seq199094 89.7 1e-15
seq443020 78.8 2e-12
>seq257960
Length=1007
Score = 381 bits (422), Expect = 1e-103
Identities = 321/384 (84%), Gaps = 14/384 (4%)
Strand=Plus/Minus
Query 41 AGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGAT 100
||||||||||||||||||||| | ||||| ||||||| |||||||||||| || |||||
Sbjct 1007 AGTCGGTTCGGTCCTCCAGTTGAT-GTTACTCAACCTT-CAACCTGCCCAT-GGCTAGAT 951
Query 101 CGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGC 160
| | |||||| |||||||| || || |||| |||| | ||| ||||| ||| | |
Sbjct 950 CACTCGGTTT-CGGGTCTACA-CCTTGCAACTAAACGCGCAGTTAACACTCGGTTTCC-C 894
Query 161 TACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACA 220
|||| |||| ||||||| |||| || || || || ||||||||||||||||||||||
Sbjct 893 TACGGCTCCGCTATTCGCTTAACCTC-GCTACAAAATGTAAGTCGCTGACCCATTATACA 835
Query 221 AAAGGTACGCAGTCACC----CAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTT 276
|||||||||||||||| ||| || |||||||||||||||||| |||||||||
Sbjct 834 AAAGGTACGCAGTCACGGTCTCAAGAACC---GCTCCCACTGCTTGTACGTATACGGTTT 778
Query 277 CAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTT 336
|||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||
Sbjct 777 CAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTT 718
Query 337 CACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAA 396
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 717 CACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAAACAGG 658
Query 397 GTTTCTCGTGCTCCGTCCTACTCG 420
| || |||| ||| | ||||||
Sbjct 657 ATGTCACGTGTCCCGCCTTACTCG 634
>seq266510
Length=454
Score = 345 bits (382), Expect = 1e-92
Identities = 211/223 (95%), Gaps = 1/223 (0%)
Strand=Plus/Plus
Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC-AAAGTGGGCTCCCACT 257
||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||||||||
Sbjct 1 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCAAACTAAATTTGGCTCCCACT 60
Query 258 GCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCT 317
||||||||| || |||||||||| ||||||||||||||||| | ||||||||||||||||
Sbjct 61 GCTTGTACGTATGCGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCT 120
Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 121 TTCCCTCACGGTACTGGTTCACTATCGGTCAGTTAGTAGTATTTAGCCTTGGAGGATGGT 180
Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|||||||||||||||||||||||| ||||||||||||||||||
Sbjct 181 CCCCCCATATTCAGACAAAGTTTCACGTGCTCCGTCCTACTCG 223
>seq351919
Length=286
Score = 343 bits (380), Expect = 4e-92
Identities = 256/292 (88%), Gaps = 6/292 (2%)
Strand=Plus/Minus
Query 79 TCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGC 138
||||||||||||| || |||||| || ||||| |||||||| | |||||| |||| |||
Sbjct 286 TCAACCTGCCCAT-GGCTAGATCACCGGGTTT-CGGGTCTAAT-CCCAGCAACTATTCGC 230
Query 139 CCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAA 198
| ||| ||||| ||| | ||||| |||| ||||||| |||| ||| || |||||||
Sbjct 229 GCAGTTAACACTCGGTTTCC-CTACGGCTCCGCTATTCGCTTAACCTT-GCTACTGAAAT 172
Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258
||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct 171 TAAGTCGTTGACCCATTATACAAAAGGTACGCAGTCACAGAACAA-GTCTGCTCCCACTG 113
Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318
|||||||| ||||||||||||| ||||||||||||||||| | |||||||||||||||||
Sbjct 112 CTTGTACGTATACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTT 53
Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370
|||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 52 TCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 1
>seq35889
Length=586
Score = 316 bits (350), Expect = 5e-84
Identities = 204/222 (92%), Gaps = 1/222 (0%)
Strand=Plus/Plus
Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 1 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA-GTGGGCTCCTACTG 59
Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318
|||||||| | ||||||||||| ||||||||||||||||| | |||||||||||||||||
Sbjct 60 CTTGTACGTACACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTT 119
Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378
|||||||||||||| ||||||||||||||||| | ||||||||||||| || |||||||
Sbjct 120 TCCCTCACGGTACTGGTTCACTATCGGTCAGTTGGGAGTATTTAGCCTTAGATGATGGTC 179
Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
| || |||||||| ||||||||| ||||||||| ||||||||
Sbjct 180 CACCTATATTCAGTCAAAGTTTCACGTGCTCCGACCTACTCG 221
>seq266509
Length=210
Score = 295 bits (326), Expect = 2e-77
Identities = 193/210 (92%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC-AACAAAGTG-GGCTCCCAC 256
|||||||||||||||||||||||||||||||| ||||||| || ||| | |||||||||
Sbjct 1 TAAGTCGCTGACCCATTATACAAAAGGTACGCGGTCACCCTAATAAATTAAGGCTCCCAC 60
Query 257 TGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316
|||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct 61 TGCTTGTACGCACACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCC 120
Query 317 TTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGG 376
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 121 TTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGG 180
Query 377 TCCCCCCATATTCAGACAAAGTTTCTCGTG 406
||||||||| |||| ||| |||||||||
Sbjct 181 TCCCCCCATCTTCAAACAGGATTTCTCGTG 210
>seq392608
Length=818
Score = 284 bits (314), Expect = 3e-74
Identities = 308/395 (78%), Gaps = 14/395 (4%)
Strand=Plus/Minus
Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89
||||||||| | ||||||||||||||| || || |||||| || ||| ||||||| ||
Sbjct 399 TTTTCAACGTCAA-CGGTTCGGTCCTCCACTTTGT-GTTACCAAAGCTT-CAACCTGTCC 343
Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGA 148
|| || |||||| | |||||| || ||||| | | ||||| | ||||||| | |||
Sbjct 342 ATGGG-TAGATCACACGGTTT-CGCGTCTAACACT-ACTGACTAAAGCGCCCTATTCAGA 286
Query 149 CTCGCTTTTCGCTACGCCTCC----CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTC 204
|||||||| ||||||| ||| | || | ||| ||| |||| | ||| ||
Sbjct 285 CTCGCTTT-CGCTACGGATCCGTGGCTTAACCACTTATCCTT-GCCAGCAACGTTAACTC 228
Query 205 GCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTA 264
| | | |||||| ||||||| |||| ||||||| || || ||||||| || |||||||
Sbjct 227 GTAGGCTCATTATGCAAAAGGCACGCCGTCACCCCACTAAA-GGGCTCCGACCGCTTGTA 169
Query 265 CGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTC 324
|| || ||||||||||||||||||||||| | | | |||||||||| ||||||||||
Sbjct 168 AGCGTATGGTTTCAGGATCTATTTCACTCCGTTATTCACGGTTCTTTTCACCTTTCCCTC 109
Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384
|||||||| |||||||||||||| |||| ||||||||||||| | |||||||||| |||
Sbjct 108 ACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGCCTTAGCGGATGGTCCCGCCA 49
Query 385 TATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419
||||||||| ||||||||| ||| |||||||
Sbjct 48 AATTCAGACAGGATTTCTCGTGTCCCGCCCTACTC 14
>seq362979
Length=304
Score = 197 bits (218), Expect = 3e-48
Identities = 180/216 (83%), Gaps = 11/216 (5%)
Strand=Plus/Plus
Query 3 TCCGATCCACAGGTCATT-CCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTT 61
||||| ||||| ||||| |||| ||||||||| || ||||||||||||||||
Sbjct 99 TCCGACCCACAAGTCATCACCGCA---TTTTTCAACATACGTGTGTTCGGTCCTCCAGTT 155
Query 62 AGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATT 121
| ||||| ||||||| |||||||||||| |||||||||||||||||| |||||||||
Sbjct 156 GAT-GTTACTCAACCTT-CAACCTGCCCAT-GGATAGATCGCCCGGTTT-CGGGTCTATA 211
Query 122 TCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTA 181
||| || |||| |||||||| ||||||||||||| ||||||| |||||||| ||||||
Sbjct 212 -CCCTGCAACTAAACGCCCTATTAAGACTCGCTTT-CGCTACGGCTCCCCTAAACGGTTA 269
Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTAT 217
| ||| || || ||| ||||||||||||||||||||
Sbjct 270 ACCTT-GCTACAGAATATAAGTCGCTGACCCATTAT 304
>seq337199
Length=308
Score = 168 bits (186), Expect = 2e-39
Identities = 174/216 (81%), Gaps = 9/216 (4%)
Strand=Plus/Plus
Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62
||| | ||||| ||||| || ||||||||| ||||| |||| |||||||||||||||||
Sbjct 102 TCCTAACCACAAGTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGTCCTCCAGTT- 158
Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122
| ||||| ||||| |||||||||| ||| || |||||| |||| ||||||||||| |
Sbjct 159 GATGTTACTCAACC-TTCAACCTGCTCAT-GGCTAGATC-ACCGGGTTTCGGGTCTA-TA 214
Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182
|| || |||| ||||| ||||||||| |||| ||||| || ||||| ||||||||
Sbjct 215 CCTTGCAACTATTCGCCCAGTTAAGACTCG-GTTTCCCTACGGCTACCCTAATCGGTTAA 273
Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATA 218
| | || || || |||||||||||||||||||||
Sbjct 274 -CCTCGCTACAAAATATAAGTCGCTGACCCATTATA 308
>seq478353
Length=548
Score = 134 bits (148), Expect = 3e-29
Identities = 74/74 (100%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 347 CAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTG 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 548 CAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTG 489
Query 407 CTCCGTCCTACTCG 420
||||||||||||||
Sbjct 488 CTCCGTCCTACTCG 475
>seq337200
Length=248
Score = 134 bits (148), Expect = 3e-29
Identities = 124/148 (84%), Gaps = 7/148 (5%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| ||||| ||||||| ||||||||| |||||||||||||||||||||| | |||
Sbjct 105 CCACAAGTCAT-CCGCTAA-TTTTTCAACATTAGTCGGTTCGGTCCTCCAGTT-GATGTT 161
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|| ||||| |||||||||||||| || |||||| || || ||||||||||| |||||||
Sbjct 162 ACTCAACC-TTCAACCTGCCCAT-GGCTAGATCACCAGG-TTTCGGGTCTA-ATCCCAGC 217
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTT 156
|||| ||||| ||||||||| |||
Sbjct 218 AACTATTCGCCCAGTTAAGACTCGGTTT 245
>seq199094
Length=690
Score = 89.7 bits (98), Expect = 1e-15
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 347 CAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTG 406
|||||||||||||||||||||||| |||||||| |||||||||| ||| | || ||||
Sbjct 1 CAGTCAGTAGTATTTAGCCTTGGAAGATGGTCCTCCCATATTCAAACAGCATATCACGTG 60
Query 407 CTCCGTCCTACTCG 420
||||||||||||
Sbjct 61 TGCCGTCCTACTCG 74
>seq443020
Length=407
Score = 78.8 bits (86), Expect = 2e-12
Identities = 57/66 (86%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 355 AGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCC 414
||||||||||||||||||||||||||||||| |||| ||| | || |||| ||||||
Sbjct 407 AGTATTTAGCCTTGGAGGATGGTCCCCCCATGTTCAAACAGGATATCACGTGTCCCGTCC 348
Query 415 TACTCG 420
||||||
Sbjct 347 TACTCG 342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1235075367168
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