Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq257960 381 1e-103 seq266510 345 1e-92 seq351919 343 4e-92 seq35889 316 5e-84 seq266509 295 2e-77 seq392608 284 3e-74 seq362979 197 3e-48 seq337199 168 2e-39 seq478353 134 3e-29 seq337200 134 3e-29 seq199094 89.7 1e-15 seq443020 78.8 2e-12 >seq257960 Length=1007 Score = 381 bits (422), Expect = 1e-103 Identities = 321/384 (84%), Gaps = 14/384 (4%) Strand=Plus/Minus Query 41 AGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGAT 100 ||||||||||||||||||||| | ||||| ||||||| |||||||||||| || ||||| Sbjct 1007 AGTCGGTTCGGTCCTCCAGTTGAT-GTTACTCAACCTT-CAACCTGCCCAT-GGCTAGAT 951 Query 101 CGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGC 160 | | |||||| |||||||| || || |||| |||| | ||| ||||| ||| | | Sbjct 950 CACTCGGTTT-CGGGTCTACA-CCTTGCAACTAAACGCGCAGTTAACACTCGGTTTCC-C 894 Query 161 TACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACA 220 |||| |||| ||||||| |||| || || || || |||||||||||||||||||||| Sbjct 893 TACGGCTCCGCTATTCGCTTAACCTC-GCTACAAAATGTAAGTCGCTGACCCATTATACA 835 Query 221 AAAGGTACGCAGTCACC----CAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTT 276 |||||||||||||||| ||| || |||||||||||||||||| ||||||||| Sbjct 834 AAAGGTACGCAGTCACGGTCTCAAGAACC---GCTCCCACTGCTTGTACGTATACGGTTT 778 Query 277 CAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTT 336 |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| Sbjct 777 CAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTT 718 Query 337 CACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAA 396 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 717 CACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAAACAGG 658 Query 397 GTTTCTCGTGCTCCGTCCTACTCG 420 | || |||| ||| | |||||| Sbjct 657 ATGTCACGTGTCCCGCCTTACTCG 634 >seq266510 Length=454 Score = 345 bits (382), Expect = 1e-92 Identities = 211/223 (95%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC-AAAGTGGGCTCCCACT 257 ||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||||| Sbjct 1 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCAAACTAAATTTGGCTCCCACT 60 Query 258 GCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCT 317 ||||||||| || |||||||||| ||||||||||||||||| | |||||||||||||||| Sbjct 61 GCTTGTACGTATGCGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCT 120 Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 121 TTCCCTCACGGTACTGGTTCACTATCGGTCAGTTAGTAGTATTTAGCCTTGGAGGATGGT 180 Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 |||||||||||||||||||||||| |||||||||||||||||| Sbjct 181 CCCCCCATATTCAGACAAAGTTTCACGTGCTCCGTCCTACTCG 223 >seq351919 Length=286 Score = 343 bits (380), Expect = 4e-92 Identities = 256/292 (88%), Gaps = 6/292 (2%) Strand=Plus/Minus Query 79 TCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGC 138 ||||||||||||| || |||||| || ||||| |||||||| | |||||| |||| ||| Sbjct 286 TCAACCTGCCCAT-GGCTAGATCACCGGGTTT-CGGGTCTAAT-CCCAGCAACTATTCGC 230 Query 139 CCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAA 198 | ||| ||||| ||| | ||||| |||| ||||||| |||| ||| || ||||||| Sbjct 229 GCAGTTAACACTCGGTTTCC-CTACGGCTCCGCTATTCGCTTAACCTT-GCTACTGAAAT 172 Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||| Sbjct 171 TAAGTCGTTGACCCATTATACAAAAGGTACGCAGTCACAGAACAA-GTCTGCTCCCACTG 113 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||||||| ||||||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct 112 CTTGTACGTATACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTT 53 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 52 TCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 1 >seq35889 Length=586 Score = 316 bits (350), Expect = 5e-84 Identities = 204/222 (92%), Gaps = 1/222 (0%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 1 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA-GTGGGCTCCTACTG 59 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||||||| | ||||||||||| ||||||||||||||||| | ||||||||||||||||| Sbjct 60 CTTGTACGTACACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCCTT 119 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| ||||||||||||||||| | ||||||||||||| || ||||||| Sbjct 120 TCCCTCACGGTACTGGTTCACTATCGGTCAGTTGGGAGTATTTAGCCTTAGATGATGGTC 179 Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | || |||||||| ||||||||| ||||||||| |||||||| Sbjct 180 CACCTATATTCAGTCAAAGTTTCACGTGCTCCGACCTACTCG 221 >seq266509 Length=210 Score = 295 bits (326), Expect = 2e-77 Identities = 193/210 (92%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC-AACAAAGTG-GGCTCCCAC 256 |||||||||||||||||||||||||||||||| ||||||| || ||| | ||||||||| Sbjct 1 TAAGTCGCTGACCCATTATACAAAAGGTACGCGGTCACCCTAATAAATTAAGGCTCCCAC 60 Query 257 TGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCC 316 |||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||| Sbjct 61 TGCTTGTACGCACACGGTTTCAGGTTCTATTTCACTCCCCTCACAGGGGTTCTTTTCGCC 120 Query 317 TTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGG 376 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct 121 TTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGATGG 180 Query 377 TCCCCCCATATTCAGACAAAGTTTCTCGTG 406 ||||||||| |||| ||| ||||||||| Sbjct 181 TCCCCCCATCTTCAAACAGGATTTCTCGTG 210 >seq392608 Length=818 Score = 284 bits (314), Expect = 3e-74 Identities = 308/395 (78%), Gaps = 14/395 (4%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| | ||||||||||||||| || || |||||| || ||| ||||||| || Sbjct 399 TTTTCAACGTCAA-CGGTTCGGTCCTCCACTTTGT-GTTACCAAAGCTT-CAACCTGTCC 343 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAGA 148 || || |||||| | |||||| || ||||| | | ||||| | ||||||| | ||| Sbjct 342 ATGGG-TAGATCACACGGTTT-CGCGTCTAACACT-ACTGACTAAAGCGCCCTATTCAGA 286 Query 149 CTCGCTTTTCGCTACGCCTCC----CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTC 204 |||||||| ||||||| ||| | || | ||| ||| |||| | ||| || Sbjct 285 CTCGCTTT-CGCTACGGATCCGTGGCTTAACCACTTATCCTT-GCCAGCAACGTTAACTC 228 Query 205 GCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTA 264 | | | |||||| ||||||| |||| ||||||| || || ||||||| || ||||||| Sbjct 227 GTAGGCTCATTATGCAAAAGGCACGCCGTCACCCCACTAAA-GGGCTCCGACCGCTTGTA 169 Query 265 CGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTC 324 || || ||||||||||||||||||||||| | | | |||||||||| |||||||||| Sbjct 168 AGCGTATGGTTTCAGGATCTATTTCACTCCGTTATTCACGGTTCTTTTCACCTTTCCCTC 109 Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384 |||||||| |||||||||||||| |||| ||||||||||||| | |||||||||| ||| Sbjct 108 ACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGCCTTAGCGGATGGTCCCGCCA 49 Query 385 TATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||| ||||||||| ||| ||||||| Sbjct 48 AATTCAGACAGGATTTCTCGTGTCCCGCCCTACTC 14 >seq362979 Length=304 Score = 197 bits (218), Expect = 3e-48 Identities = 180/216 (83%), Gaps = 11/216 (5%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATT-CCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTT 61 ||||| ||||| ||||| |||| ||||||||| || |||||||||||||||| Sbjct 99 TCCGACCCACAAGTCATCACCGCA---TTTTTCAACATACGTGTGTTCGGTCCTCCAGTT 155 Query 62 AGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATT 121 | ||||| ||||||| |||||||||||| |||||||||||||||||| ||||||||| Sbjct 156 GAT-GTTACTCAACCTT-CAACCTGCCCAT-GGATAGATCGCCCGGTTT-CGGGTCTATA 211 Query 122 TCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTA 181 ||| || |||| |||||||| ||||||||||||| ||||||| |||||||| |||||| Sbjct 212 -CCCTGCAACTAAACGCCCTATTAAGACTCGCTTT-CGCTACGGCTCCCCTAAACGGTTA 269 Query 182 AGCTTTGCCACTGAAAATAAGTCGCTGACCCATTAT 217 | ||| || || ||| |||||||||||||||||||| Sbjct 270 ACCTT-GCTACAGAATATAAGTCGCTGACCCATTAT 304 >seq337199 Length=308 Score = 168 bits (186), Expect = 2e-39 Identities = 174/216 (81%), Gaps = 9/216 (4%) Strand=Plus/Plus Query 3 TCCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTA 62 ||| | ||||| ||||| || ||||||||| ||||| |||| ||||||||||||||||| Sbjct 102 TCCTAACCACAAGTCATCCC-CTAACTTTT-CAACGTTAGTGGGTTCGGTCCTCCAGTT- 158 Query 63 GTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTT 122 | ||||| ||||| |||||||||| ||| || |||||| |||| ||||||||||| | Sbjct 159 GATGTTACTCAACC-TTCAACCTGCTCAT-GGCTAGATC-ACCGGGTTTCGGGTCTA-TA 214 Query 123 CCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAA 182 || || |||| ||||| ||||||||| |||| ||||| || ||||| |||||||| Sbjct 215 CCTTGCAACTATTCGCCCAGTTAAGACTCG-GTTTCCCTACGGCTACCCTAATCGGTTAA 273 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATA 218 | | || || || ||||||||||||||||||||| Sbjct 274 -CCTCGCTACAAAATATAAGTCGCTGACCCATTATA 308 >seq478353 Length=548 Score = 134 bits (148), Expect = 3e-29 Identities = 74/74 (100%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 347 CAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTG 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 548 CAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTG 489 Query 407 CTCCGTCCTACTCG 420 |||||||||||||| Sbjct 488 CTCCGTCCTACTCG 475 >seq337200 Length=248 Score = 134 bits (148), Expect = 3e-29 Identities = 124/148 (84%), Gaps = 7/148 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||||||| ||||||||| |||||||||||||||||||||| | ||| Sbjct 105 CCACAAGTCAT-CCGCTAA-TTTTTCAACATTAGTCGGTTCGGTCCTCCAGTT-GATGTT 161 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 || ||||| |||||||||||||| || |||||| || || ||||||||||| ||||||| Sbjct 162 ACTCAACC-TTCAACCTGCCCAT-GGCTAGATCACCAGG-TTTCGGGTCTA-ATCCCAGC 217 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTT 156 |||| ||||| ||||||||| ||| Sbjct 218 AACTATTCGCCCAGTTAAGACTCGGTTT 245 >seq199094 Length=690 Score = 89.7 bits (98), Expect = 1e-15 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 347 CAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTG 406 |||||||||||||||||||||||| |||||||| |||||||||| ||| | || |||| Sbjct 1 CAGTCAGTAGTATTTAGCCTTGGAAGATGGTCCTCCCATATTCAAACAGCATATCACGTG 60 Query 407 CTCCGTCCTACTCG 420 |||||||||||| Sbjct 61 TGCCGTCCTACTCG 74 >seq443020 Length=407 Score = 78.8 bits (86), Expect = 2e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 355 AGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCC 414 ||||||||||||||||||||||||||||||| |||| ||| | || |||| |||||| Sbjct 407 AGTATTTAGCCTTGGAGGATGGTCCCCCCATGTTCAAACAGGATATCACGTGTCCCGTCC 348 Query 415 TACTCG 420 |||||| Sbjct 347 TACTCG 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1235075367168