Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq142421 208 2e-51 seq312118 206 5e-51 seq190646 190 4e-46 seq127494 185 2e-44 seq458515 181 2e-43 seq443255 178 3e-42 seq142356 96.9 7e-18 seq268572 86.0 1e-14 seq190644 73.4 8e-11 >seq142421 Length=429 Score = 208 bits (230), Expect = 2e-51 Identities = 142/160 (89%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||||||||| |||| ||||||||||||||| ||||||||||||||||||||| Sbjct 161 GGCATGGCTGCATCAGGCTTTCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 102 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 101 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGAT 42 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||||| ||||||| || |||| ||||||||||| |||||| Sbjct 41 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATC 2 >seq312118 Length=428 Score = 206 bits (228), Expect = 5e-51 Identities = 233/306 (76%), Gaps = 7/306 (2%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 391 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 332 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||| | | ||| |||||||| || | ||| ||| Sbjct 331 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGAT 272 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || |||| ||||||||||| |||||| | || ||||| | Sbjct 271 CGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCCACCTAGGCTCATCTGATA 212 Query 181 GCG-ATAAATCTTTGGTCAAAGAATGATGCCATCC-TCTGACATTATGCGGTATTAGCGT 238 ||| | | |||| || | | || | ||| |||||||||||||||| Sbjct 211 GCGCAAGGCCCGAAGGTC---CCCTGCTTTCTCCCGTAGGAC-GTATGCGGTATTAGCGT 156 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 ||||||| |||||||| || | || |||||| || || | || |||||||||||||| Sbjct 155 CCGTTTCCGAACGTTATCCCCCACTATCAGGCAGATTCCT-AGGTATTACTCACCCGTCC 97 Query 299 GCCACT 304 ||| || Sbjct 96 GCCGCT 91 >seq190646 Length=382 Score = 190 bits (210), Expect = 4e-46 Identities = 218/289 (75%), Gaps = 17/289 (6%) Strand=Plus/Minus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | Sbjct 382 CCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 323 Query 84 CAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATC 143 || |||||| | ||| |||||||| || |||| |||||||| ||||||| ||| ||| | Sbjct 322 CAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCTCTTACC 263 Query 144 TCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAA 203 |||||||| | |||||| | | || ||||| ||| | | |||| ||||| Sbjct 262 TCACCAACAAGCTAATCCCACTTGGGCTCATCTAGTCGCG--AGAGCTTT----CAAGAA 209 Query 204 TGATGCCATCCTCTGAC--------ATTATGCGGTATTAGCGTTCGTTTCCAAACGTTAT 255 || ||| ||| | || |||||||||||||| |||||||||| ||| | Sbjct 208 -GAGGCC-CCCTTTCACCCGTAGGTCGTATGCGGTATTAGCAGTCGTTTCCAACTGTTGT 151 Query 256 TCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||| |||||| || | || | ||||||||||||||||| || Sbjct 150 CCCCCTCGACTAGGCAGATT-CCCAAGCATTACTCACCCGTCCGCCGCT 103 >seq127494 Length=1980 Score = 185 bits (204), Expect = 2e-44 Identities = 137/160 (86%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 300 GGCATGGCTGGATCAGGGTTTCCCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 241 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||| |||||||||||||||||| |||||| | ||| |||||||| || ||||| ||| Sbjct 240 GAGTCCGGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCTCTCAGACCAGCTACAGAT 181 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||||| | |||| ||| ||| | ||||| ||| |||||| Sbjct 180 CGTCGCCATGGTAGGCCTTTACCCCACCATCTAGCTAATC 141 >seq458515 Length=281 Score = 181 bits (200), Expect = 2e-43 Identities = 156/193 (81%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| |||||| || |||||||||||||||||| Sbjct 45 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAG 104 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | || |||||||| | ||||| || Sbjct 105 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 164 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| || ||| || |||||||| ||||| || ||| || ||||||||| Sbjct 165 CGTAGTCTTGGTAAGCCGTTACCTTACCAACTAACTAATGGGACGCATGCTCATCTTTCA 224 Query 181 GCGATAAATCTTT 193 |||||||||||| Sbjct 225 CCGATAAATCTTT 237 >seq443255 Length=443 Score = 178 bits (196), Expect = 3e-42 Identities = 222/302 (74%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||| || | |||||| |||||| || |||||||||||||||||| Sbjct 347 GGCATGGCTGGTTCAGACTTGCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 288 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | || |||||||| | ||||| || Sbjct 287 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 228 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| || ||| || |||||||| ||||| || ||| || ||||||| | Sbjct 227 CGTAGTCTTGGTAAGCCGTTACCTTACCAACTAACTAATGGGACGCATGCTCATCTTTTA 168 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCC-ATCCTCTGACATTATGCGGTATTAGCGTT 239 |||||||||||| | ||| ||||||| || || | | | ||| ||||||| Sbjct 167 CCGATAAATCTTTAATTAAATCTTGATGCCAATACT-TAATACTATAAGGTATTAATCCA 109 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 |||| | ||| || | ||||||| || |||| ||| ||||| ||||||| || Sbjct 108 AATTTCTCTGGGCTATCCCTTTGTGAAAGGTAGATTGCATACGCGTTACGCACCCGTGCG 49 Query 300 CC 301 || Sbjct 48 CC 47 >seq142356 Length=252 Score = 96.9 bits (106), Expect = 7e-18 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||||||||| || | ||||||||||||||| ||||||||||||||||||||| Sbjct 68 GGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 9 Query 61 GAGTCTGG 68 |||||||| Sbjct 8 GAGTCTGG 1 >seq268572 Length=1256 Score = 86.0 bits (94), Expect = 1e-14 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 65 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 6 Query 61 GAGTC 65 ||||| Sbjct 5 GAGTC 1 >seq190644 Length=416 Score = 73.4 bits (80), Expect = 8e-11 Identities = 69/87 (79%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 218 GACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGC 277 ||||||||||||||||||| |||||||||| ||| | || | | |||||| ||| | Sbjct 333 GACATTATGCGGTATTAGCAGTCGTTTCCAACTGTTGTCCCCCACCTCAAGGCATGTT-C 275 Query 278 TCACGTGTTACTCACCCGTCCGCCACT 304 || | ||||||||||||||||| || Sbjct 274 CCAAGCATTACTCACCCGTCCGCCGCT 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 993153388032