Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001590.1 Length=402 Score E Sequences producing significant alignments: (Bits) Value seq307700 93.3 1e-16 >seq307700 Length=723 Score = 93.3 bits (102), Expect = 1e-16 Identities = 236/352 (67%), Gaps = 8/352 (2%) Strand=Plus/Minus Query 2 GAGGACATCTACAGCCGAAAGGCCGTGGGCTGGGAAGTTTACGAGCAAGAAAGTGGCGAG 61 || || || ||||| ||||| ||| || ||||||||| || | | |||| || ||| Sbjct 703 GAAGATATTTACAGTCGAAAAATCGTCGGTTGGGAAGTTCACTACGACGAAACAGGTGAG 644 Query 62 CTGGCGGCCGAACTGATGCAGCGCACCGT--GCTCACCGAACGCTGCGCCG-GACGGCCC 118 | || || | ||| | |||||||||| | ||| ||| ||| || | | Sbjct 643 CAAGCAGCAGCACTACTAGAGCGCACCGTCTGGTCAGAGAAA--TGCTTAAAGAAAGACG 586 Query 119 TTAGTGCTGCACTCGGACAACGGTGCACCGATGAAATCGGTGACGTTGCTGAGCAAAC-T 177 || ||| ||||||| || || || || || ||||| ||||| ||| |||| || | Sbjct 585 TT-GTGTTGCACTCAGATAATGGCGCGCCCATGAAGAGCCTGACGATGC-GAGCTAAGAT 528 Query 178 GTACGAACTCGGCATCACCCCGTCACGCGGACGACCACGGGTGAGTAACGATAATCCCTA 237 |||||| | || | | || || | || ||| |||| ||||| |||||||| || Sbjct 527 GTACGATTTAGGTGTTGTTACCTCGCGAAGTCGTCCAAGGGTAAGTAATGATAATCCGTA 468 Query 238 CTCAGAATCGCTGTTTAGAACCCTGAAATATTGCCCGCAATGGCCTCCTGGTGGTTTTGC 297 |||||||||||| |||||||| | || ||| || | |||||| || |||||| Sbjct 467 CTCAGAATCGCTATTTAGAACGGTAAAGTATCATCCACGTTGGCCTAGTGAAGGTTTTAA 408 Query 298 AGATTTGGACGCGGCACGCAGCTGGGTGCGCGATTTTATCCGCTGGTACAAC 349 | || || || ||||| | |||||| || ||| | ||||||||| Sbjct 407 ATCGTTAGAAGCAGCACGTAAATGGGTGAATGAATTTGTTTATTGGTACAAC 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177778056320