Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq520391 338 1e-90 seq523697 286 8e-75 >seq520391 Length=657 Score = 338 bits (374), Expect = 1e-90 Identities = 313/393 (80%), Gaps = 3/393 (1%) Strand=Plus/Plus Query 3 ATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGA 62 ||||||| ||| ||||| || ||||| ||||| |||| || || || ||||| | |||| Sbjct 71 ATGGTCAACAATTCGCCACCGACCTGAGTCCAGGCCAACCCGGTCACTTGACCAATTTGA 130 Query 63 TCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGGAG 122 ||||| || |||| ||| ||||||||||| | || || ||||||||||| || Sbjct 131 TCCTGAACTTCAGCCAAGCCATAGCTGAATTTTCTTACACCCAGGAAGTGCTCAAGAAGC 190 Query 123 TCGGCCGTGACCTTCACCGAGAAGCG-TTTTTCCAGCGCATGTTCCTTGACCGCCTTGCG 181 || | |||||| |||||| |||||| |||||||| |||||| || ||||| |||||||| Sbjct 191 TCTGGCGTGACGGTCACCGCGAAGCGTTTTTTCCATCGCATGCTCTTTGACTGCCTTGCG 250 Query 182 GCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCG 241 |||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| || Sbjct 251 GCAGATCTTCGCAATCTGACGCTCCAGGCCCCGCACACC-GCTTCGCGGGTGTAGTAACG 309 Query 242 GACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGC 301 | ||||||||||| | || ||||| | | ||||||||| |||| ||| ||||| Sbjct 310 AATAATGTCGCGGATAGCTTCGTTATCAAACGCCAGCTCGCCCTTTTTCAAGCCGTTGGC 369 Query 302 CGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTA 361 |||||| || || || ||||| |||| || |||||||| || ||||| |||||||| Sbjct 370 TTCAATCTGTTTCGGGGCCAGGTATTTGACAGCAATGTTGATTTTTTCGTC-TCGGTGTA 428 Query 362 ACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 ||||||| ||||| ||||||||||||||||| Sbjct 429 GCCCGGCAAACGAATGACTTCCATCCGGTCCAG 461 >seq523697 Length=475 Score = 286 bits (316), Expect = 8e-75 Identities = 291/378 (77%), Gaps = 1/378 (0%) Strand=Plus/Plus Query 18 CCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGATCCTGCTGCTCGGCC 77 || || ||||| ||||| |||| || || ||||| |||| || |||||| || ||| Sbjct 1 CCACCGACCTGAGTCCAGGCCAAACCTGTCACCTGCCCGATCTGGTCCTGCACTTCAGCC 60 Query 78 AGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGGAGTCGGCCGTGACCTTC 137 | |||||||||||||| | || ||||||||||| || || || | ||| || | Sbjct 61 AAACCGTAGCTGAATTTTCTTACACCGAGGAAGTGTTCAAGCAGCTCTGGCGTCACGGTA 120 Query 138 ACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTGACCGCCTTGCGGCAGATCTTCGCGATC 197 || | ||||||||||||| |||||| || ||||| ||||||||||| ||||| || || Sbjct 121 ACTGCAAAGCGTTTTTCCATCGCATGCTCTTTGACGGCCTTGCGGCAAATCTTAGCAATT 180 Query 198 TGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCGGATC 257 || ||||| ||||| |||||||||||||| || ||||| || || | |||||||||||| Sbjct 181 TGACGCTCAAGGCCCCGCACACCGGCTTCACGCGTGTAATAACGAATGATGTCGCGGATA 240 Query 258 GTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGC 317 | || ||||| | | |||||||||||||| ||||| || |||||| || || Sbjct 241 GCTTCGTTATCAAACGCCAGCTCGCCCTTCTTCAAACCATTTGCTTCAATCTGTTTCGGG 300 Query 318 GCGAGGTA-CTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAAT 376 || ||||| |||| || || ||||| || |||||||||||||| || ||||| ||||| Sbjct 301 GCCAGGTATTTTGACAGCAATATTGATTTTTTCGTCTTCGGTGTAGCCTGGCAGACGAAT 360 Query 377 CACTTCCATCCGGTCCAG 394 ||||||||||||||||| Sbjct 361 GACTTCCATCCGGTCCAG 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152312584832