Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq514993 527 2e-147 seq365065 114 3e-23 seq507193 91.5 4e-16 >seq514993 Length=467 Score = 527 bits (584), Expect = 2e-147 Identities = 344/376 (91%), Gaps = 2/376 (1%) Strand=Plus/Plus Query 81 GGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTG 140 ||||| || |||||||| || ||||| ||||||||||| ||||||||||| ||||||||| Sbjct 4 GGAACACAAATCAGCACTCGCGGGCTTGGCTGCAGGAAGCTGTTTTCGTGCACCTTGTTG 63 Query 141 ATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATC 200 ||||||||||||||||| || ||||| || ||||| ||||| || |||||||| |||||| Sbjct 64 ATGAAGTACTGCAGCATTTTTTCGCAAACACTGAAATCGGCAATAACGCCGTCCTTCATC 123 Query 201 GGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGC-ATGCGCTTGGCCTCGGTGCC 259 ||||||||||||||||| ||||| ||||||||||| ||| || ||||||||||||||||| Sbjct 124 GGACGAATGGCAGCAATGTTGCCCGGTGTACGGCCAAGCTATACGCTTGGCCTCGGTGCC 183 Query 260 GACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACCGATGGCTCATT 319 |||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||| Sbjct 184 AACGGCAACGACACTTTTCTGGTTACCGTGTGTCCGAATAGCCACAACCGATGGCTCATT 243 Query 320 CAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGA 379 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 244 CAGGACAATACCGCGCTCACGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCGATGGA 303 Query 380 AAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGGAAAGGACCCTAAGCAAC 439 ||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| Sbjct 304 AAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT-GGGAAAGGGACCTAGGCAAC 362 Query 440 GCGTGGGTAAAAAAGT 455 |||||||||||||||| Sbjct 363 GCGTGGGTAAAAAAGT 378 >seq365065 Length=769 Score = 114 bits (126), Expect = 3e-23 Identities = 179/255 (70%), Gaps = 6/255 (2%) Strand=Plus/Plus Query 174 AAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGG 233 || ||||| || |||||||||||||| || ||||| || ||| || || || |||||| Sbjct 13 AAATCGGCAATTACGCCGTCTTTCATTGGTCGAATAGCTTTAATGTTACCAGGCGTACGG 72 Query 234 CCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGG 291 || | ||| |||| || || || || || | | | || ||||| | |||| | Sbjct 73 CCTAACATCTGCTTTGCTTCAGTACCTACTGAAGCAACGCTTTTAGGCCCACCAGCACGC 132 Query 292 TC----CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAA 347 || ||||| || || || ||||| || || || || || || || || ||| Sbjct 133 TCTTGACGAATAGCAACCACTGATGGTTCGTTAAGTACTATGCCTTCTTCTTTTACATAA 192 Query 348 ATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGT 407 || ||||| ||||| || |||| ||| || || |||||| | ||||| || ||||| ||| Sbjct 193 ATGAGGGTATTGGCTGTACCCAAGTCGATCGATAGATCGTTTGAAAAAATACCACGGAGT 252 Query 408 TTCTTGAACATGGGG 422 || || |||||| || Sbjct 253 TTTTTAAACATGAGG 267 >seq507193 Length=1390 Score = 91.5 bits (100), Expect = 4e-16 Identities = 155/219 (71%), Gaps = 7/219 (3%) Strand=Plus/Plus Query 37 CCGATTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCACGGAACGCAGATCAGCA 96 ||| |||||| || || |||||| ||| | || ||||| || || || || | || || Sbjct 1035 CCGCTTCACGAATCGCTTTACGCTCAACCAGAGTAGACTTACAAGGCACACAAACCACCA 1094 Query 97 CACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCA 156 | ||| ||| || || |||| || | | ||||| ||||||| | || |||| Sbjct 1095 CGTTAGG-CTGCGC--CATAAAACGCTTGGCTTTTACCTTCGTGATGAAATGCTTGAGCA 1151 Query 157 TCTTCTCGCAGACGCTG--AAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGC 214 | || | || | | || ||||| || |||||||||||||| | || ||||| || | Sbjct 1152 TTTTTT-GC-GTCACTTCAAAGTCAGCAATCACGCCGTCTTTTAATGGGCGAATCGCTGT 1209 Query 215 AATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTC 253 ||||||| | |||||||| || ||||| ||||||| || Sbjct 1210 AATATTGGCAGGTGTACGACCAAGCATCTGCTTGGCATC 1248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1346486804928