Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001690.1
Length=455
Score E
Sequences producing significant alignments: (Bits) Value
seq514993 527 2e-147
seq365065 114 3e-23
seq507193 91.5 4e-16
>seq514993
Length=467
Score = 527 bits (584), Expect = 2e-147
Identities = 344/376 (91%), Gaps = 2/376 (1%)
Strand=Plus/Plus
Query 81 GGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTG 140
||||| || |||||||| || ||||| ||||||||||| ||||||||||| |||||||||
Sbjct 4 GGAACACAAATCAGCACTCGCGGGCTTGGCTGCAGGAAGCTGTTTTCGTGCACCTTGTTG 63
Query 141 ATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATC 200
||||||||||||||||| || ||||| || ||||| ||||| || |||||||| ||||||
Sbjct 64 ATGAAGTACTGCAGCATTTTTTCGCAAACACTGAAATCGGCAATAACGCCGTCCTTCATC 123
Query 201 GGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGC-ATGCGCTTGGCCTCGGTGCC 259
||||||||||||||||| ||||| ||||||||||| ||| || |||||||||||||||||
Sbjct 124 GGACGAATGGCAGCAATGTTGCCCGGTGTACGGCCAAGCTATACGCTTGGCCTCGGTGCC 183
Query 260 GACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACCGATGGCTCATT 319
|||||||||||||||||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct 184 AACGGCAACGACACTTTTCTGGTTACCGTGTGTCCGAATAGCCACAACCGATGGCTCATT 243
Query 320 CAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGA 379
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 244 CAGGACAATACCGCGCTCACGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCGATGGA 303
Query 380 AAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACATGGGGAAAGGACCCTAAGCAAC 439
||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||
Sbjct 304 AAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACAT-GGGAAAGGGACCTAGGCAAC 362
Query 440 GCGTGGGTAAAAAAGT 455
||||||||||||||||
Sbjct 363 GCGTGGGTAAAAAAGT 378
>seq365065
Length=769
Score = 114 bits (126), Expect = 3e-23
Identities = 179/255 (70%), Gaps = 6/255 (2%)
Strand=Plus/Plus
Query 174 AAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGG 233
|| ||||| || |||||||||||||| || ||||| || ||| || || || ||||||
Sbjct 13 AAATCGGCAATTACGCCGTCTTTCATTGGTCGAATAGCTTTAATGTTACCAGGCGTACGG 72
Query 234 CCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGG 291
|| | ||| |||| || || || || || | | | || ||||| | |||| |
Sbjct 73 CCTAACATCTGCTTTGCTTCAGTACCTACTGAAGCAACGCTTTTAGGCCCACCAGCACGC 132
Query 292 TC----CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAA 347
|| ||||| || || || ||||| || || || || || || || || |||
Sbjct 133 TCTTGACGAATAGCAACCACTGATGGTTCGTTAAGTACTATGCCTTCTTCTTTTACATAA 192
Query 348 ATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGT 407
|| ||||| ||||| || |||| ||| || || |||||| | ||||| || ||||| |||
Sbjct 193 ATGAGGGTATTGGCTGTACCCAAGTCGATCGATAGATCGTTTGAAAAAATACCACGGAGT 252
Query 408 TTCTTGAACATGGGG 422
|| || |||||| ||
Sbjct 253 TTTTTAAACATGAGG 267
>seq507193
Length=1390
Score = 91.5 bits (100), Expect = 4e-16
Identities = 155/219 (71%), Gaps = 7/219 (3%)
Strand=Plus/Plus
Query 37 CCGATTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCACGGAACGCAGATCAGCA 96
||| |||||| || || |||||| ||| | || ||||| || || || || | || ||
Sbjct 1035 CCGCTTCACGAATCGCTTTACGCTCAACCAGAGTAGACTTACAAGGCACACAAACCACCA 1094
Query 97 CACGAGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCA 156
| ||| ||| || || |||| || | | ||||| ||||||| | || ||||
Sbjct 1095 CGTTAGG-CTGCGC--CATAAAACGCTTGGCTTTTACCTTCGTGATGAAATGCTTGAGCA 1151
Query 157 TCTTCTCGCAGACGCTG--AAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGC 214
| || | || | | || ||||| || |||||||||||||| | || ||||| || |
Sbjct 1152 TTTTTT-GC-GTCACTTCAAAGTCAGCAATCACGCCGTCTTTTAATGGGCGAATCGCTGT 1209
Query 215 AATATTGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTC 253
||||||| | |||||||| || ||||| ||||||| ||
Sbjct 1210 AATATTGGCAGGTGTACGACCAAGCATCTGCTTGGCATC 1248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1346486804928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |