Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001693.1 Length=610 Score E Sequences producing significant alignments: (Bits) Value seq315065 95.1 4e-17 seq412985 82.4 3e-13 >seq315065 Length=1253 Score = 95.1 bits (104), Expect = 4e-17 Identities = 121/165 (73%), Gaps = 4/165 (2%) Strand=Plus/Plus Query 202 TGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTT--CGCCAGCGGCT 259 || || ||||||| || ||||| || ||| ||||| || | | ||||| || | Sbjct 995 TGATGTTTCACTCAGACCAAGGTAGCCATTATACGAGT--TTGAAGTACCGCCAACGTTT 1052 Query 260 GTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGGGAAATTGCTGGGACAATGCGCC 319 |||||| ||| || || |||||||||||||| || || |||||||| |||||||| Sbjct 1053 GTGGCGCTATAAAATTACACAAAGCATGAGTCGCCGAGGTAACTGCTGGGATAATGCGCC 1112 Query 320 AATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGAC 364 ||||||||| | ||| | || || |||||||| ||| | || || Sbjct 1113 AATGGAGCGATTTTTCAGGAGTTTAAAAACGGAATGGGTGCCAAC 1157 >seq412985 Length=422 Score = 82.4 bits (90), Expect = 3e-13 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 279 CAGAGCATGAGTCGCCGGGGAAATTGCTGGGACAATGCGCCAATGGAGCGCGTGTTCCGC 338 || ||||||||||| || |||||||| ||||| ||||| |||||||| ||| | || | Sbjct 141 CAAAGCATGAGTCGACGTGGAAATTGTTGGGATAATGCCCCAATGGAACGCTTTTTTAGA 82 Query 339 AGCTTGAAAACGGAGTGGATACC 361 || || |||||||||||||| || Sbjct 81 AGTTTTAAAACGGAGTGGATGCC 59 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1836393916418