Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq296162 187 2e-45 seq248506 187 2e-45 seq268572 179 3e-43 seq62550 178 1e-42 seq62552 165 7e-39 seq127494 159 3e-37 seq291273 141 8e-32 seq242305 95.1 1e-17 seq242304 91.5 1e-16 >seq296162 Length=562 Score = 187 bits (206), Expect = 2e-45 Identities = 138/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| ||||||||||||||| |||||| ||||||| ||| || |||| Sbjct 293 TCGAGTTGCAGACCCCAATCCGGACTACGACGCACTTTATGGGATTCGCTTACCATCGCT 234 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || ||||| |||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 233 GGTTTGCAGCCCTTTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACTCGTAAGGGCCA 174 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||| |||||||||||||||||||| |||| Sbjct 173 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 133 >seq248506 Length=643 Score = 187 bits (206), Expect = 2e-45 Identities = 138/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||||||||||| ||||| || |||||||||| ||||||| Sbjct 361 TCGAGTTGCAGACTCCGATCCGGACTACGACGTACTTTGTGAGATTAGCTCCACCTCGCG 302 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || || |||||||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 301 GCTTTGCAACCCTCTGTATACGCCATTGTAGCACGTGTGTAGCCCTACTCGTAAGGGCCA 242 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||| |||||||||||||||||||| |||| Sbjct 241 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 201 >seq268572 Length=1256 Score = 179 bits (198), Expect = 3e-43 Identities = 137/161 (85%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||| Sbjct 988 TCGAGTTGCAGACTGCGATCCGGACTACGATCGGTTTTATGGGATTAGCTCCACCTCGCG 929 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | ||||| |||| |||| ||||||||| ||||||| ||||| || ||||||||| Sbjct 928 GCTTGGCAACCCTTTGTACCGACCATTGTAGCACGTGTGTAGCCCAGGCCGTAAGGGCCA 869 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||||||||||||||||||||||||||||||| Sbjct 868 TGA-TACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 829 >seq62550 Length=927 Score = 178 bits (196), Expect = 1e-42 Identities = 136/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||||||| |||||| ||||||| ||| | |||| Sbjct 567 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGGGATTCGCTTACTATCGCT 626 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || || ||||||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 627 AGCTTGCAGCACTCTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACACGTAAGGGCCA 686 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||| |||||||||||||||||||| |||| Sbjct 687 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 727 >seq62552 Length=580 Score = 165 bits (182), Expect = 7e-39 Identities = 133/161 (83%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||||||||||| | ||||| | |||| || || |||| Sbjct 278 TCGAGTTGCAGACTCCGATCCGGACTACGACAAACTTTAGGAGATTCGCATACCATCGCT 337 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 ||| || ||||| ||||| | |||||||| ||||||| ||||| ||| ||||||||| Sbjct 338 GGTGAGCAGCCCTTTGTATTTGCCATTGTAGCACGTGTGTAGCCCATCCCGTAAGGGCCA 397 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||| |||||||||||||||||||| |||| Sbjct 398 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 438 >seq127494 Length=1980 Score = 159 bits (176), Expect = 3e-37 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||| ||||||||||| |||| || |||| || | | |||| Sbjct 1224 TCGAGTTGCAGACTCCAATCTGGACTACGATAGGCTTTTTGAGATTCGCATCACATCGCT 1165 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||||||||| |||||||||| ||||||| |||||| | ||||||||| Sbjct 1164 GTGTAGCTGCCCTCTGTACCTACCATTGTAGCACGTGTGTAGCCCTGGTCGTAAGGGCCA 1105 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| ||||||||||| ||||| ||||||||| ||||||||| Sbjct 1104 TGATGACTTGACGTCGTCCCCGCCTTCCTCCAGTTTGTCAC 1064 >seq291273 Length=665 Score = 141 bits (156), Expect = 8e-32 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| ||||||||||||||| |||||| | |||| ||| || |||| Sbjct 133 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTAAGTGATTCGCTTACCTTCGCA 74 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| || || ||||||||| |||||||| ||||||| |||||||| | ||||||||| Sbjct 73 GGTTCGCAGCACTCTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACACGTAAGGGCCA 14 Query 121 TGAGGACTTGACG 133 ||| ||||||||| Sbjct 13 TGATGACTTGACG 1 >seq242305 Length=207 Score = 95.1 bits (104), Expect = 1e-17 Identities = 110/147 (75%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 4 AGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGT 63 ||||||||||| | ||||| ||| || || ||| |||| ||||| | || Sbjct 207 AGTTGCAGACTCCGATCCGAACTGAGA-ACGGTTTTGTAGATTCGCTCCTGGTTGCCCAG 149 Query 64 TGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGA 123 |||| || ||||||| |||||||| ||||||| ||||| | | |||||||| ||| Sbjct 148 TGGCTGCTCTCTGTACCGTCCATTGTAGCACGTGTGTAGCCCAAGGCGTAAGGGCCGTGA 89 Query 124 GGACTTGACGTCATCCCCACCTTCCTC 150 || ||||||||||||||||||||||| Sbjct 88 TGATTTGACGTCATCCCCACCTTCCTC 62 >seq242304 Length=207 Score = 91.5 bits (100), Expect = 1e-16 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 4 AGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGT 63 ||||||||||| | ||||| ||| || ||| | | ||| ||||| || | Sbjct 207 AGTTGCAGACTCCGATCCGAACTGTGACCGGTTTTGTAG-ATTCGCTCCTGGTCACCCAG 149 Query 64 TGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGA 123 |||| || ||||||| |||||||| ||||||| ||||| | | |||||||| ||| Sbjct 148 TGGCTGCTCTCTGTACCGGCCATTGTAGCACGTGTGTAGCCCAAGGCGTAAGGGCCGTGA 89 Query 124 GGACTTGACGTCATCCCCACCTTCCTC 150 || ||||||||||||||||||||||| Sbjct 88 TGATTTGACGTCATCCCCACCTTCCTC 62 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413882226940