Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq296162 187 2e-45
seq248506 187 2e-45
seq268572 179 3e-43
seq62550 178 1e-42
seq62552 165 7e-39
seq127494 159 3e-37
seq291273 141 8e-32
seq242305 95.1 1e-17
seq242304 91.5 1e-16
>seq296162
Length=562
Score = 187 bits (206), Expect = 2e-45
Identities = 138/161 (86%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
||||||||||||| ||||||||||||||| |||||| ||||||| ||| || ||||
Sbjct 293 TCGAGTTGCAGACCCCAATCCGGACTACGACGCACTTTATGGGATTCGCTTACCATCGCT 234
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
|||| || ||||| |||||| |||||||| ||||||| |||||||| | |||||||||
Sbjct 233 GGTTTGCAGCCCTTTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACTCGTAAGGGCCA 174
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||| |||||||||||||||||||| ||||
Sbjct 173 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 133
>seq248506
Length=643
Score = 187 bits (206), Expect = 2e-45
Identities = 138/161 (86%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| | ||||||||||||| ||||| || |||||||||| |||||||
Sbjct 361 TCGAGTTGCAGACTCCGATCCGGACTACGACGTACTTTGTGAGATTAGCTCCACCTCGCG 302
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| || || |||||||||| |||||||| ||||||| |||||||| | |||||||||
Sbjct 301 GCTTTGCAACCCTCTGTATACGCCATTGTAGCACGTGTGTAGCCCTACTCGTAAGGGCCA 242
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||| |||||||||||||||||||| ||||
Sbjct 241 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 201
>seq268572
Length=1256
Score = 179 bits (198), Expect = 3e-43
Identities = 137/161 (85%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| | |||||||||||||| ||| ||||||||||||| |||||||
Sbjct 988 TCGAGTTGCAGACTGCGATCCGGACTACGATCGGTTTTATGGGATTAGCTCCACCTCGCG 929
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| ||||| |||| |||| ||||||||| ||||||| ||||| || |||||||||
Sbjct 928 GCTTGGCAACCCTTTGTACCGACCATTGTAGCACGTGTGTAGCCCAGGCCGTAAGGGCCA 869
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||||||||||||||||||||||||||||
Sbjct 868 TGA-TACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 829
>seq62550
Length=927
Score = 178 bits (196), Expect = 1e-42
Identities = 136/161 (84%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| ||||||||||||||| |||||| ||||||| ||| | ||||
Sbjct 567 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTATGGGATTCGCTTACTATCGCT 626
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || || ||||||||| |||||||| ||||||| |||||||| | |||||||||
Sbjct 627 AGCTTGCAGCACTCTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACACGTAAGGGCCA 686
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||| |||||||||||||||||||| ||||
Sbjct 687 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 727
>seq62552
Length=580
Score = 165 bits (182), Expect = 7e-39
Identities = 133/161 (83%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| | ||||||||||||| | ||||| | |||| || || ||||
Sbjct 278 TCGAGTTGCAGACTCCGATCCGGACTACGACAAACTTTAGGAGATTCGCATACCATCGCT 337
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
||| || ||||| ||||| | |||||||| ||||||| ||||| ||| |||||||||
Sbjct 338 GGTGAGCAGCCCTTTGTATTTGCCATTGTAGCACGTGTGTAGCCCATCCCGTAAGGGCCA 397
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||| |||||||||||||||||||| ||||
Sbjct 398 TGATGACTTGACGTCGTCCCCACCTTCCTCCGGTTTATCAC 438
>seq127494
Length=1980
Score = 159 bits (176), Expect = 3e-37
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| ||||| ||||||||||| |||| || |||| || | | ||||
Sbjct 1224 TCGAGTTGCAGACTCCAATCTGGACTACGATAGGCTTTTTGAGATTCGCATCACATCGCT 1165
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || |||||||||| |||||||||| ||||||| |||||| | |||||||||
Sbjct 1164 GTGTAGCTGCCCTCTGTACCTACCATTGTAGCACGTGTGTAGCCCTGGTCGTAAGGGCCA 1105
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
||| ||||||||||| ||||| ||||||||| |||||||||
Sbjct 1104 TGATGACTTGACGTCGTCCCCGCCTTCCTCCAGTTTGTCAC 1064
>seq291273
Length=665
Score = 141 bits (156), Expect = 8e-32
Identities = 111/133 (83%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||||| ||||||||||||||| |||||| | |||| ||| || ||||
Sbjct 133 TCGAGTTGCAGACTCCAATCCGGACTACGACGCACTTTAAGTGATTCGCTTACCTTCGCA 74
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
|||| || || ||||||||| |||||||| ||||||| |||||||| | |||||||||
Sbjct 73 GGTTCGCAGCACTCTGTATGCGCCATTGTAGCACGTGTGTAGCCCTACACGTAAGGGCCA 14
Query 121 TGAGGACTTGACG 133
||| |||||||||
Sbjct 13 TGATGACTTGACG 1
>seq242305
Length=207
Score = 95.1 bits (104), Expect = 1e-17
Identities = 110/147 (75%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 4 AGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGT 63
||||||||||| | ||||| ||| || || ||| |||| ||||| | ||
Sbjct 207 AGTTGCAGACTCCGATCCGAACTGAGA-ACGGTTTTGTAGATTCGCTCCTGGTTGCCCAG 149
Query 64 TGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGA 123
|||| || ||||||| |||||||| ||||||| ||||| | | |||||||| |||
Sbjct 148 TGGCTGCTCTCTGTACCGTCCATTGTAGCACGTGTGTAGCCCAAGGCGTAAGGGCCGTGA 89
Query 124 GGACTTGACGTCATCCCCACCTTCCTC 150
|| |||||||||||||||||||||||
Sbjct 88 TGATTTGACGTCATCCCCACCTTCCTC 62
>seq242304
Length=207
Score = 91.5 bits (100), Expect = 1e-16
Identities = 109/147 (74%), Gaps = 1/147 (1%)
Strand=Plus/Minus
Query 4 AGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGGGT 63
||||||||||| | ||||| ||| || ||| | | ||| ||||| || |
Sbjct 207 AGTTGCAGACTCCGATCCGAACTGTGACCGGTTTTGTAG-ATTCGCTCCTGGTCACCCAG 149
Query 64 TGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGA 123
|||| || ||||||| |||||||| ||||||| ||||| | | |||||||| |||
Sbjct 148 TGGCTGCTCTCTGTACCGGCCATTGTAGCACGTGTGTAGCCCAAGGCGTAAGGGCCGTGA 89
Query 124 GGACTTGACGTCATCCCCACCTTCCTC 150
|| |||||||||||||||||||||||
Sbjct 88 TGATTTGACGTCATCCCCACCTTCCTC 62
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413882226940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |