Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq268572 221 2e-55
seq127494 206 4e-51
seq142420 203 5e-50
seq399236 170 3e-40
seq268573 161 2e-37
seq142355 158 2e-36
seq242303 150 3e-34
seq512490 143 4e-32
seq483502 129 1e-27
seq142421 114 2e-23
seq399237 98.7 2e-18
seq142356 98.7 2e-18
>seq268572
Length=1256
Score = 221 bits (244), Expect = 2e-55
Identities = 218/282 (77%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| |||||| |||||| | |||||| | ||||||||||||||||||
Sbjct 439 CCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGGTAGTCGCCTTCGCCACTGGTGT 380
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | ||||||||||||||||||||||||||| | |||||| | ||||| | ||
Sbjct 379 TCCTTCCTATATCTACGCATTTCACCGCTACACAGGAAATTCCACTACCCTCTACCATAC 320
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || |||||| |||||| |||||||||| | |||||||| |||
Sbjct 319 TCTAGCTTGCCAGTTTTGGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATTCAACT 260
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | || ||||| ||| |||||| |||| ||| |||| |||||||||| ||| |
Sbjct 259 TAACAAACCACCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCTG 200
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||||||||||||||||||||| ||||||||| ||||||||
Sbjct 199 TATTACCGCGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTC 158
>seq127494
Length=1980
Score = 206 bits (228), Expect = 4e-51
Identities = 222/291 (76%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGT-CCAGCAATCCGCCTTCGCCACTGGTG 59
|||||||||||| ||||||| |||||| | | | |||| | | |||||||||| |||
Sbjct 674 CCCACGCTTTCGAGCCTCAGTGTCAGT-ATTATGCCAGAAGGCTGCCTTCGCCATCGGTA 616
Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119
||||||| || |||||||||||||||||||||| ||||||| | |||||| |
Sbjct 615 TTCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCTACCTTCCTCTCACATA 556
Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179
||| || ||||||||| |||||| |||| ||||| | |||||||||||||
Sbjct 555 CTCTAGCTCTACAGTTTCAGATGCAGTTCCCAGGTTAAGCCCGGGGATTTCACATCTGAC 496
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
|| || ||||| | |||||||| |||| ||| |||| |||||||||| |||
Sbjct 495 TTATAGAGCCACCTACGCTCCCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCT 436
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||||||||| ||||||||| |||||||| ||| ||
Sbjct 435 GTATTACCGCGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCTGCAGCTA 385
>seq142420
Length=711
Score = 203 bits (224), Expect = 5e-50
Identities = 219/290 (76%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| || | ||||||||| ||||||| ||||||||||||| ||| |
Sbjct 421 CCCACGCTTTCGTGCATGAGCGTCAGTCTTTGTCCAGGGGGCCGCCTTCGCCACCGGTAT 362
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| ||||||||||||||||||||||||| ||||||| ||||| || ||
Sbjct 361 TCCTCCAGATATCTACGCATTTCACCGCTACACCTGGAATTCTACCCCCCTCTACAAGAC 302
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || ||||| |||||||| |||||||||| | ||||||||||| ||
Sbjct 301 TCTAGTTCGCCAGTTCCAAATGCAATTCCCAGGTTGAGCCCGGGGATTTCACATCTGGCT 242
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | |||||| | | | |||||| |||| ||| |||| ||||||| | ||| ||
Sbjct 241 TAACAAACCGCCTGCGCACGCTTTACGCCCAGTAATTCCGATTAACGCTCGGACCCTCCG 182
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||||||||| ||||||||| ||| ||| |||||
Sbjct 181 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTCCTTCTTCTGTAGGTA 132
>seq399236
Length=218
Score = 170 bits (188), Expect = 3e-40
Identities = 166/214 (78%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |
Sbjct 214 CCCACGCCTTCGCGCCTCAGCGTCAGTCTTTGTCCAGGTGGCCGCCTTCGCCACTGGTAT 155
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | || |||||||||||||||||||||| | ||||| ||||| || ||
Sbjct 154 TCCTTCAGATCTCTACGCATTTCACCGCTACACCTGAAATTCTACCACCCTCTACAAAAC 95
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || || ||||||||||||||| |||||||||| | ||||||||||||||
Sbjct 94 TCTAGTTAACCAGTTTCAAATGCAGTTCCAAGGTTGAGCCCTGGGATTTCACATCTGACT 35
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATA 214
| | |||||||| ||| |||||| |||| ||
Sbjct 34 TAATTAACCGCCTACGCGCGCTTTACGCCCAGTA 1
>seq268573
Length=218
Score = 161 bits (178), Expect = 2e-37
Identities = 164/214 (77%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||| |||||||||||| |||||| ||||||| ||||||||||||||||| |
Sbjct 214 CCCACGCCTTCGCGCCTCAGTGTCAGTCTTTGTCCAGGTGGCCGCCTTCGCCACTGGTAT 155
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | || |||||||||||||||||||||| | ||||| ||||| || ||
Sbjct 154 TCCTTCAGATCTCTACGCATTTCACCGCTACACCTGAAATTCTACCACCCTCTACAAAAC 95
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || || ||||||||||||||| |||||||||| | ||||||||||||||
Sbjct 94 TCTAGTCAACCAGTTTCAAATGCAGTTCCAAGGTTGAGCCCTGGGATTTCACATCTGACT 35
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATA 214
| | || ||||| ||| |||||| |||| ||
Sbjct 34 TAATTAACCACCTACGCGCGCTTTACGCCCAGTA 1
>seq142355
Length=845
Score = 158 bits (174), Expect = 2e-36
Identities = 204/282 (72%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| | | ||||||||| |||| | |||||||||| ||| |
Sbjct 421 CCCACGCTTTCGTACATGAGCGTCAGTGTTGACCCAGGTGGCTGCCTTCGCCATCGGTAT 362
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | || |||||||||||||||||||||| | ||||| ||||| |||
Sbjct 361 TCCTTCAGATCTCTACGCATTTCACCGCTACACCTGAAATTCTACCACCCTCTATCACAC 302
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || ||||| |||||||| |||||||||| | |||||||||| ||
Sbjct 301 TCTAGTTTGCCAGTTCGAAATGCAGTTCCCAGGTTGAGCCCGGGGCTTTCACATCTCGCT 242
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | |||||| | | |||||| |||| ||| |||| ||||||| || ||| ||
Sbjct 241 TAACAAACCGCCTGCGTACGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTCCG 182
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||| ||||||||| |||| |||
Sbjct 181 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTC 140
>seq242303
Length=641
Score = 150 bits (166), Expect = 3e-34
Identities = 206/284 (73%), Gaps = 4/284 (1%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGT-TACT-GTCCAGCAATCCGCCTTCGCCACTGGT 58
|||||||||||| | ||||||||| | || | || || || | |||||||| | ||||
Sbjct 286 CCCACGCTTTCGTCCATCAGCGTCAATATATTAGT--AGTAACCTGCCTTCGCAATTGGT 229
Query 59 GTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118
|||| || |||| ||||||||||||||||| |||| || | || |
Sbjct 228 ATTCCATGTAATCTCTAAGCATTTCACCGCTACACTACATATTCTAGTTACTTCCTAATA 169
Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178
| ||||| | ||||| |||| || | ||||||| | |||||| ||||
Sbjct 168 ATTCAAGTCAGACAGTATCAATGGCCGTTCCACCGTTGAGCGATGGGCTTTCACCACTGA 109
Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238
||| || |||||||| ||||||| ||||||| | ||||||||||||||| |||
Sbjct 108 CTTATCTGACCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTTGGATCCTC 49
Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||||| ||||||||| |||||||
Sbjct 48 CGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTC 5
>seq512490
Length=237
Score = 143 bits (158), Expect = 4e-32
Identities = 167/223 (75%), Gaps = 3/223 (1%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| || | ||||||||| |||||||| | | | |||| | | || |
Sbjct 221 CCCACGCTTTCGAGCTTTAGCGTCAGTATCTGTCCAGTGAGCTGTCTTCACTATCGGCAT 162
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | ||||||||| |||||||| |||||| | | ||||| ||||||||| ||
Sbjct 161 TCCTACAAATATCTACGAATTTCACCTCTACACTTGTAGTTCCGCCCACCTCTCCAGTAC 102
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG-GTTGAGCCCATAGTTTTCACATCTGAC 179
|| || |||||||||| ||| || || ||||||||| ||||||||||||||
Sbjct 101 TCTAGCCTGCCAGTTTCAAACGCA--ATACGGAGTTGAGCCCCGCATTTTCACATCTGAC 44
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGA 222
|| | ||||||| || | |||||| |||||||| ||||||
Sbjct 43 TTAACAAGCCGCCTAGACTCGCTTTACGCCCAATAATTCCGGA 1
>seq483502
Length=393
Score = 129 bits (142), Expect = 1e-27
Identities = 125/161 (78%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||
Sbjct 161 CCCACGCTTTCGTTCCTCAGCGTCAGTATCTGTCCAGGTGGCCGCCTTCGCCACTGATGT 102
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | || |||||||||||||||||||||| | |||||| ||||| ||| ||
Sbjct 101 TCCTTCCAATCTCTACGCATTTCACCGCTACACTGGAAATTCCACCACCCTCTACAGTAC 42
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCC 161
|| || | ||||| |||||||| ||||||||||
Sbjct 41 TCTAGTTACCCAGTTCAAAATGCAGTTCCAAGGTTGAGCCC 1
>seq142421
Length=429
Score = 114 bits (126), Expect = 2e-23
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 152 GGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCCA 211
|||||||||| | |||||||||| ||| | |||||| || || |||||| ||||
Sbjct 383 GGTTGAGCCCCGGGCTTTCACATCTTGCTTAACAGACCGCCTGCATGCGCTTTACGCCCA 324
Query 212 ATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCC 271
||| |||| ||||||| || ||| |||||||||||||||||||||||| ||||||||
Sbjct 323 GTAATTCCGATTAACGCTCGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCC 264
Query 272 GTGGCTTATTC 282
| |||| |||
Sbjct 263 GGTGCTTCTTC 253
>seq399237
Length=211
Score = 98.7 bits (108), Expect = 2e-18
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| || ||||||||| ||||||| ||||||||||||| ||| |
Sbjct 106 CCCACGCTTTCGCATCTGAGCGTCAGTCTTTGTCCAGGGGGCCGCCTTCGCCACCGGTAT 47
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTC 102
|||| | || |||||||||||||||||||||| | |||||
Sbjct 46 TCCTTCAGATCTCTACGCATTTCACCGCTACACCTGAAATTC 5
>seq142356
Length=252
Score = 98.7 bits (108), Expect = 2e-18
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250
||||| ||| |||||| |||| ||| |||| ||||||| || ||| ||||||||||||
Sbjct 252 CCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCCTCCGTATTACCGCG 193
Query 251 GCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||| ||||||||| |||| |||
Sbjct 192 GCTGCTGGCACGGAGTTAGCCGGTGCTTCTTC 161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 824580744442
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