Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq196718 158 8e-37
seq12755 145 5e-33
seq306624 114 9e-24
seq186018 113 3e-23
seq156890 96.9 2e-18
>seq196718
Length=378
Score = 158 bits (174), Expect = 8e-37
Identities = 119/140 (85%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 174 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTA 115
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||| | |||||| | ||| ||||||| | |||| ||| |||||||||||||
Sbjct 114 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTATGCCATTGCACTAA 55
Query 121 CACTACGATTTCCGACCGTA 140
| |||||| ||||||||||
Sbjct 54 CCGTACGATGTCCGACCGTA 35
>seq12755
Length=1866
Score = 145 bits (160), Expect = 5e-33
Identities = 117/139 (84%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||
Sbjct 1538 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 1479
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120
|||||| | |||||| | |||| | ||||||| | |||| | |||||||| || ||| |
Sbjct 1478 CTTTCGTACCTGCTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCT 1419
Query 121 CACTAC-GATTTCCGACCG 138
|| || ||||||||||||
Sbjct 1418 -ACGACCGATTTCCGACCG 1401
>seq306624
Length=388
Score = 114 bits (126), Expect = 9e-24
Identities = 96/118 (81%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||| |||||||||||||||||||| | | |||||||||||||||| ||
Sbjct 217 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 158
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| | ||| || | ||| |||| || |||||| | ||| ||||||||||||
Sbjct 157 CTTTCGTACCTGATCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACT 100
>seq186018
Length=271
Score = 113 bits (124), Expect = 3e-23
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 82 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTA 23
Query 61 CTTTCGCATCTGCTC 75
|||||| | ||||||
Sbjct 22 CTTTCGTACCTGCTC 8
>seq156890
Length=341
Score = 96.9 bits (106), Expect = 2e-18
Identities = 82/100 (82%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 40 CCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGC 99
||||||||||||||||||||||||||| | |||||| | |||| ||||||| | ||||
Sbjct 336 CCACCGGATCACTATGACCTGCTTTCGTACCTGCTCGACTTGTCATTCTCGCAGTTAAGC 277
Query 100 ACACTTTTGCCATTGCACTATCACTACGATTTCCGACCGT 139
||| ||||||||||||| | ||||| |||||||||
Sbjct 276 -GGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGT 238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 350265843400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |