Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq196718 158 8e-37 seq12755 145 5e-33 seq306624 114 9e-24 seq186018 113 3e-23 seq156890 96.9 2e-18 >seq196718 Length=378 Score = 158 bits (174), Expect = 8e-37 Identities = 119/140 (85%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 174 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTA 115 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | ||| ||||||| | |||| ||| ||||||||||||| Sbjct 114 CTTTCGTACCTGCTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTATGCCATTGCACTAA 55 Query 121 CACTACGATTTCCGACCGTA 140 | |||||| |||||||||| Sbjct 54 CCGTACGATGTCCGACCGTA 35 >seq12755 Length=1866 Score = 145 bits (160), Expect = 5e-33 Identities = 117/139 (84%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 ||||||||||||||||||||||||||||||||| || | |||||||||||||| ||||| Sbjct 1538 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTA 1479 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| | |||||| | |||| | ||||||| | |||| | |||||||| || ||| | Sbjct 1478 CTTTCGTACCTGCTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCT 1419 Query 121 CACTAC-GATTTCCGACCG 138 || || |||||||||||| Sbjct 1418 -ACGACCGATTTCCGACCG 1401 >seq306624 Length=388 Score = 114 bits (126), Expect = 9e-24 Identities = 96/118 (81%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | |||||||||||||||| || Sbjct 217 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTA 158 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 |||||| | ||| || | ||| |||| || |||||| | ||| |||||||||||| Sbjct 157 CTTTCGTACCTGATCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACT 100 >seq186018 Length=271 Score = 113 bits (124), Expect = 3e-23 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 82 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTA 23 Query 61 CTTTCGCATCTGCTC 75 |||||| | |||||| Sbjct 22 CTTTCGTACCTGCTC 8 >seq156890 Length=341 Score = 96.9 bits (106), Expect = 2e-18 Identities = 82/100 (82%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 40 CCACCGGATCACTATGACCTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGC 99 ||||||||||||||||||||||||||| | |||||| | |||| ||||||| | |||| Sbjct 336 CCACCGGATCACTATGACCTGCTTTCGTACCTGCTCGACTTGTCATTCTCGCAGTTAAGC 277 Query 100 ACACTTTTGCCATTGCACTATCACTACGATTTCCGACCGT 139 ||| ||||||||||||| | ||||| ||||||||| Sbjct 276 -GGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGT 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350265843400