Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01001946.1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
seq196718 210 2e-52
seq156890 188 7e-46
seq12755 141 9e-32
seq306624 118 1e-24
seq156799 114 1e-23
seq186018 109 5e-22
seq40952 96.9 3e-18
>seq196718
Length=378
Score = 210 bits (232), Expect = 2e-52
Identities = 140/156 (90%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 162 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTG 103
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143
||||| ||| ||||||||| |||| ||||||||||||||||||||| ||||||||
Sbjct 102 CTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTATGCCATTGCACTAACCGTACGATGTC 43
Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
||||||| ||||| ||||||||||||||||||||
Sbjct 42 CGACCGTACTTAGCCAACCTTCGTGCTCCTCCGTTA 7
>seq156890
Length=341
Score = 188 bits (208), Expect = 7e-46
Identities = 123/134 (92%), Gaps = 1/134 (1%)
Strand=Plus/Minus
Query 46 CAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGT 105
|||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||
Sbjct 341 CAGAACCACCGGATCACTATGACCTGCTTTCGTACCTGCTCGACTTGTCATTCTCGCAGT 282
Query 106 CAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAGCTGACCTTC 165
|||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 281 TAAGCG-GCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGTTTAGCCAACCTTC 223
Query 166 GTGCTCCTCCGTTA 179
||||||||||||||
Sbjct 222 GTGCTCCTCCGTTA 209
>seq12755
Length=1866
Score = 141 bits (156), Expect = 9e-32
Identities = 125/156 (80%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| |||||
Sbjct 1526 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTG 1467
Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143
||||| || ||||||||| |||| |||| |||| || ||| | |||| ||
Sbjct 1466 CTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGACCGATTTC 1407
Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179
|||||| | ||| |||||||| |||||||||||
Sbjct 1406 CGACCGGTCTGAGCGCACCTTCGTACTCCTCCGTTA 1371
>seq306624
Length=388
Score = 118 bits (130), Expect = 1e-24
Identities = 89/105 (85%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84
|||||||||||||||||||| | ||||||||||||||||||| || |||||| |||||
Sbjct 204 TTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTACTTTCGTACCTGA 145
Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129
|||| | || |||| ||||||||| ||||||||||||||||
Sbjct 144 TCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACT 100
>seq156799
Length=475
Score = 114 bits (126), Expect = 1e-23
Identities = 75/83 (90%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 97 TCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAG 156
||||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 473 TCTCGCAGTTAAGCTGGCTTATACCATTGTACTAACCTCACGATGTCCGACCGTGATTAG 414
Query 157 CTGACCTTCGTGCTCCTCCGTTA 179
| |||||||| |||||||||||
Sbjct 413 CCAACCTTCGTACTCCTCCGTTA 391
>seq186018
Length=271
Score = 109 bits (120), Expect = 5e-22
Identities = 63/65 (97%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 70 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTG 11
Query 84 CTCGA 88
|||||
Sbjct 10 CTCGA 6
>seq40952
Length=1454
Score = 96.9 bits (106), Expect = 3e-18
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 97 TCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAG 156
||||||||| |||| |||| | ||||| |||||||| ||||||||||||||| ||||
Sbjct 5 TCTCGCAGTTAAGCTGGCTTCTACCATTACACTAACCGTACGATGTCCGACCGTACTTAG 64
Query 157 CTGACCTTCGTGCTCCTCCGTTA 179
| ||||||||||||||||||||
Sbjct 65 CCAACCTTCGTGCTCCTCCGTTA 87
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471188996824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |