Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq196718 210 2e-52 seq156890 188 7e-46 seq12755 141 9e-32 seq306624 118 1e-24 seq156799 114 1e-23 seq186018 109 5e-22 seq40952 96.9 3e-18 >seq196718 Length=378 Score = 210 bits (232), Expect = 2e-52 Identities = 140/156 (90%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 162 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTG 103 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| ||| ||||||||| |||| ||||||||||||||||||||| |||||||| Sbjct 102 CTCGACGTGTCTGTCTCGCAGTTAAGCTGGCTTATGCCATTGCACTAACCGTACGATGTC 43 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| |||||||||||||||||||| Sbjct 42 CGACCGTACTTAGCCAACCTTCGTGCTCCTCCGTTA 7 >seq156890 Length=341 Score = 188 bits (208), Expect = 7e-46 Identities = 123/134 (92%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 46 CAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGT 105 |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| Sbjct 341 CAGAACCACCGGATCACTATGACCTGCTTTCGTACCTGCTCGACTTGTCATTCTCGCAGT 282 Query 106 CAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAGCTGACCTTC 165 |||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 281 TAAGCG-GCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGTTTAGCCAACCTTC 223 Query 166 GTGCTCCTCCGTTA 179 |||||||||||||| Sbjct 222 GTGCTCCTCCGTTA 209 >seq12755 Length=1866 Score = 141 bits (156), Expect = 9e-32 Identities = 125/156 (80%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct 1526 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTAAGACCTACTTTCGTACCTG 1467 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| || ||||||||| |||| |||| |||| || ||| | |||| || Sbjct 1466 CTCGACTTGTGGGTCTCGCAGTTAAGCGCGCTTTTGCCTTTATACTCTACGACCGATTTC 1407 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 |||||| | ||| |||||||| ||||||||||| Sbjct 1406 CGACCGGTCTGAGCGCACCTTCGTACTCCTCCGTTA 1371 >seq306624 Length=388 Score = 118 bits (130), Expect = 1e-24 Identities = 89/105 (85%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 |||||||||||||||||||| | ||||||||||||||||||| || |||||| ||||| Sbjct 204 TTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATGCTCTACTTTCGTACCTGA 145 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 |||| | || |||| ||||||||| |||||||||||||||| Sbjct 144 TCGACCTGTATGTCTCTCAGTCAAGCTCCCTTATGCCATTGCACT 100 >seq156799 Length=475 Score = 114 bits (126), Expect = 1e-23 Identities = 75/83 (90%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 97 TCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAG 156 ||||||||| |||| |||||| |||||| |||||||||||||||||||||||||||||| Sbjct 473 TCTCGCAGTTAAGCTGGCTTATACCATTGTACTAACCTCACGATGTCCGACCGTGATTAG 414 Query 157 CTGACCTTCGTGCTCCTCCGTTA 179 | |||||||| ||||||||||| Sbjct 413 CCAACCTTCGTACTCCTCCGTTA 391 >seq186018 Length=271 Score = 109 bits (120), Expect = 5e-22 Identities = 63/65 (97%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 70 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTACTTTCGTACCTG 11 Query 84 CTCGA 88 ||||| Sbjct 10 CTCGA 6 >seq40952 Length=1454 Score = 96.9 bits (106), Expect = 3e-18 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 97 TCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAG 156 ||||||||| |||| |||| | ||||| |||||||| ||||||||||||||| |||| Sbjct 5 TCTCGCAGTTAAGCTGGCTTCTACCATTACACTAACCGTACGATGTCCGACCGTACTTAG 64 Query 157 CTGACCTTCGTGCTCCTCCGTTA 179 | |||||||||||||||||||| Sbjct 65 CCAACCTTCGTGCTCCTCCGTTA 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471188996824