Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq12755 279 8e-73 seq196718 181 2e-43 seq306624 176 7e-42 seq186018 172 9e-41 seq196743 152 8e-35 seq196742 136 6e-30 seq196744 132 7e-29 >seq12755 Length=1866 Score = 279 bits (308), Expect = 8e-73 Identities = 222/267 (83%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68 ||||| |||||||||| |||||| ||||||| ||| ||| ||||| || || |||| Sbjct 1866 GCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCATCCGAACGTAGCTACCGGGCAATGCC 1807 Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128 |||| ||||| | ||||||||||| ||||| | ||||||||||||||| | | Sbjct 1806 ACTGGCGTGACAACCCGAACACCAGAGGTTCGTCCACTCTGGTCCTCTCGTACTAGGAGC 1747 Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188 || ||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| Sbjct 1746 AGATCCTCTCAAATTTCCAACGCCCACGGTAGATAGGGACCGAACTGTCTCACGACGTTC 1687 Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 | |||||||||||||| ||||||||| ||||||||||| |||||| |||||| ||||| Sbjct 1686 TAAACCCAGCTCGCGTACCTCTTTAAATGGCGAACAGCCATACCCTTAGGACCTGCTTCA 1627 Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275 |||| ||||||||| |||||||||||| Sbjct 1626 GCCCTAGGATGAGATGAGCCGACATCG 1600 >seq196718 Length=378 Score = 181 bits (200), Expect = 2e-43 Identities = 126/143 (88%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 133 CCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192 |||||||| | || ||||||||| | |||||||||||||||||||| ||||||||| || Sbjct 378 CCTCTCAATTCTCAAACGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAA 319 Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252 |||||||||||| || |||||| ||||||||||| |||||||||||| |||||||||| Sbjct 318 CCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCGACTTCAGCCC 259 Query 253 CAGGATGAGACGAGCCGACATCG 275 ||||||| || |||||||||||| Sbjct 258 CAGGATGTGATGAGCCGACATCG 236 >seq306624 Length=388 Score = 176 bits (194), Expect = 7e-42 Identities = 105/110 (95%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 166 GACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAG 225 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 388 GACCGAACTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAG 329 Query 226 CCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||||||||||| || ||||||||||||| ||||||||||||||| Sbjct 328 CCCAACCCTTGGGACCTTCTCCAGCCCCAGGATGTGACGAGCCGACATCG 279 >seq186018 Length=271 Score = 172 bits (190), Expect = 9e-41 Identities = 115/128 (90%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 148 ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCC 207 ||||||||| | |||||||||||||||||||| ||||||||| |||||||||||||| || Sbjct 271 ACGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACC 212 Query 208 TCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGC 267 |||||| ||||||||||| |||||||||||| ||||||||||||||||| || |||| Sbjct 211 ACTTTAAATGGCGAACAGCCATACCCTTGGGACCGACTTCAGCCCCAGGATGTGATGAGC 152 Query 268 CGACATCG 275 |||||||| Sbjct 151 CGACATCG 144 >seq196743 Length=230 Score = 152 bits (168), Expect = 8e-35 Identities = 134/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75 |||||||||| |||||| ||||| | || ||| ||||| ||| || |||| |||| Sbjct 167 GCTTAGATGCTTTCAGCGGTTATCTTTCCCGAACATAGCTACCCGGCAATGCCACTGGCG 108 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 ||||| || ||||||||||| ||||| ||||||||||||||||| | |||| ||| Sbjct 107 TGACAACCGGAACACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCT 48 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 ||||||| || ||||||||| | |||||||||||||||||||| || Sbjct 47 CTCAAATCTCAAACGCCCACGGCAGATAGGGACCGAACTGTCTCACG 1 >seq196742 Length=580 Score = 136 bits (150), Expect = 6e-30 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 1 CGAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCA 60 ||||| |||||| |||||||||| |||||| |||||| |||| ||| ||||| || Sbjct 170 CGAGGCCTGCTTCGCGCTTAGATGCTTTCAGCGCTTATCAGTTCCGAACGTAGCTACCGG 111 Query 61 GCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTA 120 || |||| |||||| ||||| | |||||| |||| || || |||||||||||||| Sbjct 110 GCAATGCCATTGGCATGACAACCCGAACACCAGCGGTTCGTTCACTCCGGTCCTCTCGTA 51 Query 121 CTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCG 170 ||| | || | |||||||| | || ||||||||| | ||||||||||| Sbjct 50 CTAGGAGCAACCCCTCTCAATTCTCAAACGCCCACGGCAGATAGGGACCG 1 >seq196744 Length=317 Score = 132 bits (146), Expect = 7e-29 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68 ||||| |||||||||| |||||| ||||| |||| ||| ||||| || || |||| Sbjct 161 GCTTCCCGCTTAGATGCTTTCAGCGGTTATCGATTCCGAACGTAGCTACCGGGCAATGCC 102 Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128 |||||| ||||| | |||||| |||| ||||| ||||||||||||||||| | | Sbjct 101 ATTGGCATGACAACCCGAACACCAGCGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGC 42 Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACC 169 ||| |||||||| ||| ||||||||| | |||||||||| Sbjct 41 AGCCCCTCTCAATCATCCAACGCCCACGGCAGATAGGGACC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 776825102872