Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq142421 300 5e-79
seq127494 277 5e-72
seq312118 241 4e-61
seq142356 214 5e-53
seq458515 205 3e-50
seq443255 190 6e-46
seq268572 188 2e-45
seq142355 188 2e-45
seq190646 185 3e-44
seq142420 176 1e-41
seq242303 95.1 4e-17
>seq142421
Length=429
Score = 300 bits (332), Expect = 5e-79
Identities = 279/356 (78%), Gaps = 25/356 (7%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
||||||||||||||| |||||| |||| ||||||||||||||| |||| | |||||||
Sbjct 2 GATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCCCTAGCTGGTCTGAGAG 61
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||||||||||
Sbjct 62 GATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGG 121
Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346
|||||||||||||||||| ||||||||||||||| | |||||||| | || |||||||||
Sbjct 122 GAATATTGCACAATGGGCGAAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGGCCTT 181
Query 347 CGGGTCGTAAAGCTCTGTC---CTCAAGGAAG-----------ATA----------ATGA 382
||||| |||||| || || |||||| ||| |||
Sbjct 182 CGGGTTGTAAAGTACTTTCAGTTGTGAGGAAGGGTTGGAGTTAATAGCTGCAGCGTTTGA 241
Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442
|| || || ||||| |||||||||| |||||||||||||||||||||||| ||||
Sbjct 242 CGTTAGCAACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGG 301
Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498
|| ||||||| |||||||||| |||||||||| | | ||| ||| | |||||
Sbjct 302 TGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCATGCAGGCGGTCTGTTAAG 356
>seq127494
Length=1980
Score = 277 bits (306), Expect = 5e-72
Identities = 279/363 (77%), Gaps = 26/363 (7%)
Strand=Plus/Plus
Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222
||| |||||||||| |||| ||||| ||| ||||| |||||||||| ||||| | |||
Sbjct 137 GTCGGATTAGCTAGATGGTGGGGTAAAGGCCTACCATGGCGACGATCTGTAGCTGGTCTG 196
Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282
||||| ||||| |||||| || |||||||||||| || ||||||||||||||||||||
Sbjct 197 AGAGGATGATCAGCCACACCGGGACTGAGACACGGCCCGGACTCCTACGGGAGGCAGCAG 256
Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342
|||||||||||| |||||||| ||| |||||| |||| | |||||||| | || |||||
Sbjct 257 TGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGG 316
Query 343 CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA------------TAAT-------GAC 383
|||| ||| ||||||| || | || ||||| |||| |||
Sbjct 317 CCTTTTGGTTGTAAAGCACTTTAAGCAGTGAAGAAGACTCCATGGTTAATACCCATGGAC 376
Query 384 GGT-ACTTGAG-----GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437
| | || | || || |||| |||||||||| ||||||||||||||||||||||
Sbjct 377 GATGACATTAGCTGCAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACA 436
Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497
|||| || ||||||| |||||||||| |||||||||||| |||||||||| | |||
Sbjct 437 GAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGGGAGCGTAGGTGGCTCTATAA 495
Query 498 GTC 500
|||
Sbjct 496 GTC 498
>seq312118
Length=428
Score = 241 bits (266), Expect = 4e-61
Identities = 171/196 (87%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
||||||||||||||| |||||| |||| ||||||||||||||| ||| | | |||||||
Sbjct 232 GATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCCGTAACTGGTCTGAGAG 291
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| ||||| | |||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 292 GATGATCAGTCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 351
Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346
|||||||| ||||||||| |||||||||| |||| | |||||||| | || ||||| |||
Sbjct 352 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGTCTT 411
Query 347 CGGGTCGTAAAGCTCT 362
||| | ||||||| ||
Sbjct 412 CGGATTGTAAAGCACT 427
>seq142356
Length=252
Score = 214 bits (236), Expect = 5e-53
Identities = 197/253 (78%), Gaps = 26/253 (10%)
Strand=Plus/Plus
Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318
||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1 CCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCA 60
Query 319 GCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-- 376
|| | |||||||| | || |||||| ||||||| ||||||| || || | |||| ||
Sbjct 61 GCCATGCCGCGTGTGTGAAGAAGGCTTTCGGGTTGTAAAGCACTTTCAGCGAGGAGGAAA 120
Query 377 ----------TAA-------------TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTA 413
||| ||||| |||| | || ||||| ||||||||||
Sbjct 121 GGTTGTACTTTAATAGAGTGCAGCTGTGACGTTACTCGCAGAAGAAGCACCGGCTAACTC 180
Query 414 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTA 473
|||||||||||||||||||||||| |||| || ||||||| |||||||||| |||||||
Sbjct 181 CGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTA 239
Query 474 AAGGGTGCGTAGG 486
||| | |||||||
Sbjct 240 AAGCGCGCGTAGG 252
>seq458515
Length=281
Score = 205 bits (226), Expect = 3e-50
Identities = 165/198 (83%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
||||| ||||| ||||||||||||||||||||||||||| | ||||| |||| | ||
Sbjct 210 GCGTCCCATTAGTTAGTTGGTAAGGTAACGGCTTACCAAGACTACGATGGGTAGGGGTCC 151
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280
|||||||| |||| ||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct 150 TGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 91
Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340
|||| ||||||||| ||||||||| ||||||||| |||| | |||||||| |||||
Sbjct 90 AGTGAGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGCAGGATGAC 31
Query 341 GG-CCTTCGGGTCGTAAA 357
|| ||| || | |||||
Sbjct 30 GGTCCTATGGATTGTAAA 13
>seq443255
Length=443
Score = 190 bits (210), Expect = 6e-46
Identities = 248/339 (73%), Gaps = 3/339 (1%)
Strand=Plus/Plus
Query 21 AGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATAC 80
||| ||||| ||||||| ||||||||| | || || || | ||| | ||||| | |
Sbjct 42 AGACCGGCGCACGGGTGCGTAACGCGTATGCAATCTACCTTTCACAAAGGGATAGCCCAG 101
Query 81 CGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTA-TCAAAGCT 139
|||| | |||||| ||| ||| | | |||| ||| || | |||| |
Sbjct 102 AGAAATTTGGATTAATACCTTATAGTATTAAGTATTGGCATCA-AGATTTAATTAAAGAT 160
Query 140 CCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA 199
||||| | ||| | ||||| ||||| ||||||||||||||||||||||||||
Sbjct 161 TTATCGGTAAAAGATGAGCATGCGTCCCATTAGTTAGTTGGTAAGGTAACGGCTTACCAA 220
Query 200 GGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTC 259
| | ||||| |||| | |||||||||| |||| ||||| ||| |||||||||||| |
Sbjct 221 GACTACGATGGGTAGGGGTCCTGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGAC 280
Query 260 CAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAG 319
|| |||||||||||||||||||||| ||||||||| |||||| | ||| |||| |||
Sbjct 281 CAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAG 340
Query 320 CAACGCCGCGTGAGCGATGAAGG-CCTTCGGGTCGTAAA 357
| | |||||||| ||||| || ||| || | |||||
Sbjct 341 CCATGCCGCGTGCAGGATGACGGTCCTATGGATTGTAAA 379
>seq268572
Length=1256
Score = 188 bits (208), Expect = 2e-45
Identities = 200/263 (76%), Gaps = 28/263 (11%)
Strand=Plus/Plus
Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322
|||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| |
Sbjct 2 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCA 61
Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGT---CCTCAAGGAAG---- 375
|||||||| | || ||||| |||||| | ||||||| || | ||||||
Sbjct 62 TGCCGCGTGTGTGAAGAAGGTCTTCGGATTGTAAAGCACTTTAAGTTGGGAGGAAGGGCA 121
Query 376 --------ATA-ATGACGGTACTTGA----------GGAGGAAGCCCCGGCTAACTACGT 416
||| |||| || ||||| || |||| |||||||||| ||
Sbjct 122 GTTACCTAATACGTGACTGT-CTTGACGTTACCGACAGAATAAGCACCGGCTAACTCTGT 180
Query 417 GCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAG 476
|||||||||||||||||||| |||| || ||||||| |||||||||| ||||||||||
Sbjct 181 GCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAG 239
Query 477 GGTGCGTAGGTGGTTTCTTAAGT 499
| ||||||||||||| ||||||
Sbjct 240 CGCGCGTAGGTGGTTTGTTAAGT 262
>seq142355
Length=845
Score = 188 bits (208), Expect = 2e-45
Identities = 188/244 (77%), Gaps = 26/244 (11%)
Strand=Plus/Plus
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||||||||||||||||| |||||||||||||| | |||||||| | || ||
Sbjct 1 CAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGA 60
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCC-TCA--AGGAA---------GATAAT------- 380
|||||||||||| ||||||| || || ||| ||||| | ||||
Sbjct 61 AGGCCTTCGGGTTGTAAAGCACTTTCAGTCAGGAGGAAAGGTTAGTAGTTAATACCTGCT 120
Query 381 ------GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434
|||| |||| || ||||| |||||||||| |||||||||||||||||||||
Sbjct 121 AGCTGTGACGTTACTGACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAAT 180
Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494
||| |||| || ||||||| |||||||||| |||||||||| || || ||| ||||| |
Sbjct 181 ACGGAGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTACGCAGGCGGTTTGT 239
Query 495 TAAG 498
||||
Sbjct 240 TAAG 243
>seq190646
Length=382
Score = 185 bits (204), Expect = 3e-44
Identities = 216/287 (75%), Gaps = 11/287 (4%)
Strand=Plus/Plus
Query 22 GAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACC 81
||||||||||||||||||||| || |||| || ||||| || | ||| ||||
Sbjct 102 GAGCGGCGGACGGGTGAGTAATGCTTGGG-AATCTGCCTAGTCGAGGGGGACAACAGTTG 160
Query 82 GAAAGGTATGCTAATACGAGATAATA--TACTTTTATCGCATGGTAGAAGTATC---AAA 136
|||| | ||||||||| ||| | ||| | | | || | || |||
Sbjct 161 GAAACGACTGCTAATACCGCATACGACCTACGGGT---GAAAGGGGGCCTCTTCTTGAAA 217
Query 137 GCTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTAC 196
|||| ||| || ||| ||| || |||||||| |||||| |||||| ||| ||
Sbjct 218 GCTCTCGCG--ACTAGATGAGCCCAAGTGGGATTAGCTTGTTGGTGAGGTAAGAGCTCAC 275
Query 197 CAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACG 256
||||||||||||| |||| | |||||||| ||||| |||||| |||||||||||||||
Sbjct 276 CAAGGCGACGATCCCTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACG 335
Query 257 GTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGG 303
||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 336 GTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGG 382
>seq142420
Length=711
Score = 176 bits (194), Expect = 1e-41
Identities = 183/244 (75%), Gaps = 26/244 (11%)
Strand=Plus/Plus
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
|||||||||||||||||||||||| ||| ||||||||||| | |||||||| | || ||
Sbjct 1 CAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCATGCCGCGTGTGTGAAGA 60
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA---------------TAA----- 379
|||||||||||| ||||||| || || | ||| || |||
Sbjct 61 AGGCCTTCGGGTTGTAAAGCACTTTCAGTAGGGAGGAAAGGTAATAGTTTAATAAACTAT 120
Query 380 -----TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434
||||| ||| | || |||| |||||||||| |||||||||||||||||||||
Sbjct 121 TACTGTGACGTTACCTACAGAAGAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAAT 180
Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494
||| |||| | ||||||| |||||||||| |||||||||| ||||| ||| ||||| |
Sbjct 181 ACGGAGGGTCCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGT 239
Query 495 TAAG 498
||||
Sbjct 240 TAAG 243
>seq242303
Length=641
Score = 95.1 bits (104), Expect = 4e-17
Identities = 74/87 (85%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463
||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||| |
Sbjct 15 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGAATCA 74
Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490
| ||| |||||||| |||||| |||
Sbjct 75 -TTGGGTTTAAAGGGTCCGTAGGCGGT 100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1489730082048
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