Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq142421 300 5e-79 seq127494 277 5e-72 seq312118 241 4e-61 seq142356 214 5e-53 seq458515 205 3e-50 seq443255 190 6e-46 seq268572 188 2e-45 seq142355 188 2e-45 seq190646 185 3e-44 seq142420 176 1e-41 seq242303 95.1 4e-17 >seq142421 Length=429 Score = 300 bits (332), Expect = 5e-79 Identities = 279/356 (78%), Gaps = 25/356 (7%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||||||| |||||| |||| ||||||||||||||| |||| | ||||||| Sbjct 2 GATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCCCTAGCTGGTCTGAGAG 61 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||||||||| Sbjct 62 GATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGG 121 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||||||||||||| ||||||||||||||| | |||||||| | || ||||||||| Sbjct 122 GAATATTGCACAATGGGCGAAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGAAGGCCTT 181 Query 347 CGGGTCGTAAAGCTCTGTC---CTCAAGGAAG-----------ATA----------ATGA 382 ||||| |||||| || || |||||| ||| ||| Sbjct 182 CGGGTTGTAAAGTACTTTCAGTTGTGAGGAAGGGTTGGAGTTAATAGCTGCAGCGTTTGA 241 Query 383 CGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGG 442 || || || ||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct 242 CGTTAGCAACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGG 301 Query 443 GGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 || ||||||| |||||||||| |||||||||| | | ||| ||| | ||||| Sbjct 302 TGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCATGCAGGCGGTCTGTTAAG 356 >seq127494 Length=1980 Score = 277 bits (306), Expect = 5e-72 Identities = 279/363 (77%), Gaps = 26/363 (7%) Strand=Plus/Plus Query 163 GTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 ||| |||||||||| |||| ||||| ||| ||||| |||||||||| ||||| | ||| Sbjct 137 GTCGGATTAGCTAGATGGTGGGGTAAAGGCCTACCATGGCGACGATCTGTAGCTGGTCTG 196 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||||| |||||| || |||||||||||| || |||||||||||||||||||| Sbjct 197 AGAGGATGATCAGCCACACCGGGACTGAGACACGGCCCGGACTCCTACGGGAGGCAGCAG 256 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 |||||||||||| |||||||| ||| |||||| |||| | |||||||| | || ||||| Sbjct 257 TGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGG 316 Query 343 CCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA------------TAAT-------GAC 383 |||| ||| ||||||| || | || ||||| |||| ||| Sbjct 317 CCTTTTGGTTGTAAAGCACTTTAAGCAGTGAAGAAGACTCCATGGTTAATACCCATGGAC 376 Query 384 GGT-ACTTGAG-----GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACG 437 | | || | || || |||| |||||||||| |||||||||||||||||||||| Sbjct 377 GATGACATTAGCTGCAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACA 436 Query 438 TAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAA 497 |||| || ||||||| |||||||||| |||||||||||| |||||||||| | ||| Sbjct 437 GAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGGGAGCGTAGGTGGCTCTATAA 495 Query 498 GTC 500 ||| Sbjct 496 GTC 498 >seq312118 Length=428 Score = 241 bits (266), Expect = 4e-61 Identities = 171/196 (87%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||||||| |||||| |||| ||||||||||||||| ||| | | ||||||| Sbjct 232 GATTAGCTAGTTGGTGAGGTAATGGCTCACCAAGGCGACGATCCGTAACTGGTCTGAGAG 291 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| | |||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 292 GATGATCAGTCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 351 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| ||||||||| |||||||||| |||| | |||||||| | || ||||| ||| Sbjct 352 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGTCTT 411 Query 347 CGGGTCGTAAAGCTCT 362 ||| | ||||||| || Sbjct 412 CGGATTGTAAAGCACT 427 >seq142356 Length=252 Score = 214 bits (236), Expect = 5e-53 Identities = 197/253 (78%), Gaps = 26/253 (10%) Strand=Plus/Plus Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318 ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 CCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCA 60 Query 319 GCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-- 376 || | |||||||| | || |||||| ||||||| ||||||| || || | |||| || Sbjct 61 GCCATGCCGCGTGTGTGAAGAAGGCTTTCGGGTTGTAAAGCACTTTCAGCGAGGAGGAAA 120 Query 377 ----------TAA-------------TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTA 413 ||| ||||| |||| | || ||||| |||||||||| Sbjct 121 GGTTGTACTTTAATAGAGTGCAGCTGTGACGTTACTCGCAGAAGAAGCACCGGCTAACTC 180 Query 414 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTA 473 |||||||||||||||||||||||| |||| || ||||||| |||||||||| ||||||| Sbjct 181 CGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTA 239 Query 474 AAGGGTGCGTAGG 486 ||| | ||||||| Sbjct 240 AAGCGCGCGTAGG 252 >seq458515 Length=281 Score = 205 bits (226), Expect = 3e-50 Identities = 165/198 (83%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||| ||||| ||||||||||||||||||||||||||| | ||||| |||| | || Sbjct 210 GCGTCCCATTAGTTAGTTGGTAAGGTAACGGCTTACCAAGACTACGATGGGTAGGGGTCC 151 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 |||||||| |||| ||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 150 TGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 91 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||| ||||||||| ||||||||| ||||||||| |||| | |||||||| ||||| Sbjct 90 AGTGAGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCCATGCCGCGTGCAGGATGAC 31 Query 341 GG-CCTTCGGGTCGTAAA 357 || ||| || | ||||| Sbjct 30 GGTCCTATGGATTGTAAA 13 >seq443255 Length=443 Score = 190 bits (210), Expect = 6e-46 Identities = 248/339 (73%), Gaps = 3/339 (1%) Strand=Plus/Plus Query 21 AGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATAC 80 ||| ||||| ||||||| ||||||||| | || || || | ||| | ||||| | | Sbjct 42 AGACCGGCGCACGGGTGCGTAACGCGTATGCAATCTACCTTTCACAAAGGGATAGCCCAG 101 Query 81 CGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTA-TCAAAGCT 139 |||| | |||||| ||| ||| | | |||| ||| || | |||| | Sbjct 102 AGAAATTTGGATTAATACCTTATAGTATTAAGTATTGGCATCA-AGATTTAATTAAAGAT 160 Query 140 CCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAA 199 ||||| | ||| | ||||| ||||| |||||||||||||||||||||||||| Sbjct 161 TTATCGGTAAAAGATGAGCATGCGTCCCATTAGTTAGTTGGTAAGGTAACGGCTTACCAA 220 Query 200 GGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTC 259 | | ||||| |||| | |||||||||| |||| ||||| ||| |||||||||||| | Sbjct 221 GACTACGATGGGTAGGGGTCCTGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGAC 280 Query 260 CAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAG 319 || |||||||||||||||||||||| ||||||||| |||||| | ||| |||| ||| Sbjct 281 CAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGCAAGTCTGAACCAG 340 Query 320 CAACGCCGCGTGAGCGATGAAGG-CCTTCGGGTCGTAAA 357 | | |||||||| ||||| || ||| || | ||||| Sbjct 341 CCATGCCGCGTGCAGGATGACGGTCCTATGGATTGTAAA 379 >seq268572 Length=1256 Score = 188 bits (208), Expect = 2e-45 Identities = 200/263 (76%), Gaps = 28/263 (11%) Strand=Plus/Plus Query 263 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 |||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||| | Sbjct 2 ACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCA 61 Query 323 CGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGT---CCTCAAGGAAG---- 375 |||||||| | || ||||| |||||| | ||||||| || | |||||| Sbjct 62 TGCCGCGTGTGTGAAGAAGGTCTTCGGATTGTAAAGCACTTTAAGTTGGGAGGAAGGGCA 121 Query 376 --------ATA-ATGACGGTACTTGA----------GGAGGAAGCCCCGGCTAACTACGT 416 ||| |||| || ||||| || |||| |||||||||| || Sbjct 122 GTTACCTAATACGTGACTGT-CTTGACGTTACCGACAGAATAAGCACCGGCTAACTCTGT 180 Query 417 GCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAG 476 |||||||||||||||||||| |||| || ||||||| |||||||||| |||||||||| Sbjct 181 GCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAG 239 Query 477 GGTGCGTAGGTGGTTTCTTAAGT 499 | ||||||||||||| |||||| Sbjct 240 CGCGCGTAGGTGGTTTGTTAAGT 262 >seq142355 Length=845 Score = 188 bits (208), Expect = 2e-45 Identities = 188/244 (77%), Gaps = 26/244 (11%) Strand=Plus/Plus Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||||||||||||||||| |||||||||||||| | |||||||| | || || Sbjct 1 CAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTGTGAAGA 60 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCC-TCA--AGGAA---------GATAAT------- 380 |||||||||||| ||||||| || || ||| ||||| | |||| Sbjct 61 AGGCCTTCGGGTTGTAAAGCACTTTCAGTCAGGAGGAAAGGTTAGTAGTTAATACCTGCT 120 Query 381 ------GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434 |||| |||| || ||||| |||||||||| ||||||||||||||||||||| Sbjct 121 AGCTGTGACGTTACTGACAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAAT 180 Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494 ||| |||| || ||||||| |||||||||| |||||||||| || || ||| ||||| | Sbjct 181 ACGGAGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTACGCAGGCGGTTTGT 239 Query 495 TAAG 498 |||| Sbjct 240 TAAG 243 >seq190646 Length=382 Score = 185 bits (204), Expect = 3e-44 Identities = 216/287 (75%), Gaps = 11/287 (4%) Strand=Plus/Plus Query 22 GAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACC 81 ||||||||||||||||||||| || |||| || ||||| || | ||| |||| Sbjct 102 GAGCGGCGGACGGGTGAGTAATGCTTGGG-AATCTGCCTAGTCGAGGGGGACAACAGTTG 160 Query 82 GAAAGGTATGCTAATACGAGATAATA--TACTTTTATCGCATGGTAGAAGTATC---AAA 136 |||| | ||||||||| ||| | ||| | | | || | || ||| Sbjct 161 GAAACGACTGCTAATACCGCATACGACCTACGGGT---GAAAGGGGGCCTCTTCTTGAAA 217 Query 137 GCTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTAC 196 |||| ||| || ||| ||| || |||||||| |||||| |||||| ||| || Sbjct 218 GCTCTCGCG--ACTAGATGAGCCCAAGTGGGATTAGCTTGTTGGTGAGGTAAGAGCTCAC 275 Query 197 CAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACG 256 ||||||||||||| |||| | |||||||| ||||| |||||| ||||||||||||||| Sbjct 276 CAAGGCGACGATCCCTAGCTGGTCTGAGAGGATGATCAGCCACACTGGAACTGAGACACG 335 Query 257 GTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGG 303 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 336 GTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGG 382 >seq142420 Length=711 Score = 176 bits (194), Expect = 1e-41 Identities = 183/244 (75%), Gaps = 26/244 (11%) Strand=Plus/Plus Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 |||||||||||||||||||||||| ||| ||||||||||| | |||||||| | || || Sbjct 1 CAGTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCCATGCCGCGTGTGTGAAGA 60 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA---------------TAA----- 379 |||||||||||| ||||||| || || | ||| || ||| Sbjct 61 AGGCCTTCGGGTTGTAAAGCACTTTCAGTAGGGAGGAAAGGTAATAGTTTAATAAACTAT 120 Query 380 -----TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAAT 434 ||||| ||| | || |||| |||||||||| ||||||||||||||||||||| Sbjct 121 TACTGTGACGTTACCTACAGAAGAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAAT 180 Query 435 ACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCT 494 ||| |||| | ||||||| |||||||||| |||||||||| ||||| ||| ||||| | Sbjct 181 ACGGAGGGTCCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGTGCGCAGGCGGTTTGT 239 Query 495 TAAG 498 |||| Sbjct 240 TAAG 243 >seq242303 Length=641 Score = 95.1 bits (104), Expect = 4e-17 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||| | Sbjct 15 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGAATCA 74 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490 | ||| |||||||| |||||| ||| Sbjct 75 -TTGGGTTTAAAGGGTCCGTAGGCGGT 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1489730082048