Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq459 188 1e-45 seq4032 113 8e-23 >seq459 Length=1892 Score = 188 bits (208), Expect = 1e-45 Identities = 199/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | || | |||| || | ||||| |||||||||||||||| Sbjct 1494 CTTCTTAGAGGGACAAGTGGAATTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 1551 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| |||||||| | || || || | Sbjct 1552 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGACTGGATCAGCGTGTGTCTAC 1611 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| |||||| | | || | | ||||| | ||||| | | |||| Sbjct 1612 CCTTCGCCGAGAGGCGCGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGATTG 1671 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 1672 CAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 1731 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 1732 AAGTCCCTGCCCTTTGTA 1749 >seq4032 Length=214 Score = 113 bits (124), Expect = 8e-23 Identities = 85/100 (85%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| | ||||| | | |||||||||||| | | | |||||||||| || ||||||||| Sbjct 27 TCGTGATAGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGC 86 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| ||||||||||| |||||||||||||||| Sbjct 87 GGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 942222445056