Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq459 188 1e-45
seq4032 113 8e-23
>seq459
Length=1892
Score = 188 bits (208), Expect = 1e-45
Identities = 199/258 (77%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | || | |||| || | ||||| ||||||||||||||||
Sbjct 1494 CTTCTTAGAGGGACAAGTGGAATTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 1551
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||| |||||||| | || || || |
Sbjct 1552 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGACTGGATCAGCGTGTGTCTAC 1611
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||| |||| ||| |||||| | | || | | ||||| | ||||| | | ||||
Sbjct 1612 CCTTCGCCGAGAGGCGCGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGATTG 1671
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 1672 CAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 1731
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 1732 AAGTCCCTGCCCTTTGTA 1749
>seq4032
Length=214
Score = 113 bits (124), Expect = 8e-23
Identities = 85/100 (85%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| | ||||| | | |||||||||||| | | | |||||||||| || |||||||||
Sbjct 27 TCGTGATAGGGATTGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGC 86
Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||||||||||| ||||||||||||||||
Sbjct 87 GGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 942222445056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |