Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq392608 356 8e-96 seq337200 251 2e-64 seq337199 230 8e-58 seq362979 212 2e-52 seq12755 129 2e-27 seq12756 125 2e-26 seq245534 122 3e-25 seq40952 107 6e-21 seq257960 86.0 2e-14 >seq392608 Length=818 Score = 356 bits (394), Expect = 8e-96 Identities = 405/533 (76%), Gaps = 14/533 (3%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||| |||||| |||| | | ||||| ||||||| |||||||||||| Sbjct 282 CGAGTCTGAATAGGGCGCTTTAGTCAGTAGTGTTAGACGCGAAACCGTGTGATCTACCCA 341 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||| | |||||||| |||||| ||||||| | | |||||||| Sbjct 342 TGGACAGGTTGAAGCTTTGGTAACACAAAGTGGAGGACCGAACCGT-TGACGTTGAAAAG 400 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||| ||||||||||||||||||||| || |||||| |||||||||| || || Sbjct 401 TCTTGGGATGATCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTCGTACT 460 Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCG---GGGGTAGAGC-ACTGT 235 | |||||| |||||||| || | | | | | | | |||||||| |||| Sbjct 461 CCCCGAAATGCATTTAGGTGCAGCGTTATGGTTAAAGTTATATAGAGGTAGAGCTACTGA 520 Query 236 TATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC-ATCA-G 293 | ||| | |||| | | | | |||||| | | |||||||||||||| || | | Sbjct 521 T-TGGATGCGGGGGCTTCACCGCCTACCAATTCCTGACAAACTCCGAATGCTATATAATG 579 Query 294 TTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCG 353 ||| | | ||||||||| ||||||||||||||| | |||||||| ||||| || Sbjct 580 TTTCATAAC---AGTGAGGGCTTGGGTGCTAAGGTCCAAGTCCGAGAGGGAAAGAACCCA 636 Query 354 GACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413 ||| ||||||||||| ||| |||| ||||||| || ||||| || || ||| | Sbjct 637 GACCATCAGCTAAGGTCCCCAAATATATACTAAGTTGAAAGAACGAGGTTTGTCTGCATA 696 Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 697 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 756 Query 474 AGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526 ||||||| | || || ||||||||||||||| | ||||| ||||||||| Sbjct 757 AGTCGAGCGGACGAGCATGGATAATAATCGGGCA-TAAGTATATTACCGAAGC 808 >seq337200 Length=248 Score = 251 bits (278), Expect = 2e-64 Identities = 201/241 (83%), Gaps = 1/241 (0%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| ||| |||||| ||||||||||||| |||||||| |||| Sbjct 241 CGAGTCTTAACTGGGCGAATAGTTGCTGGGATTAGACCCGAAACCTGGTGATCTAGCCAT 182 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||| ||||||| ||||||| |||||||||||||||| Sbjct 181 GGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCGACTAATGTTGAAAAAT 122 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||| |||||| ||||| | |||||||||||| || ||||| ||| ||||||||||||| Sbjct 121 TAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCCGGAGATAGCTGGTTCTC 62 Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240 ||||| |||||||||||| |||||| ||||||| || |||||||||||||||||| || Sbjct 61 CTCGAAAGCTATTTAGGTAGCGCCTCAGGTATCACTATTGGGGGTAGAGCACTGTTAAGG 2 Query 241 C 241 | Sbjct 1 C 1 >seq337199 Length=308 Score = 230 bits (254), Expect = 8e-58 Identities = 200/245 (82%), Gaps = 4/245 (2%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| |||||| ||| || ||| ||||||||||||| |||||||| |||| Sbjct 244 CGAGTCTTAACTGGGCGAATAGTTGCAAGGTATAGACCCGAAACCCGGTGATCTAGCCAT 185 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| ||||||| |||||| ||||||| ||||||||||||| |||||||| | Sbjct 184 GAGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCCACTAACGTTGAAAAGT 125 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||||||| ||||| |||| |||||||||||| ||||| ||| ||||||||||||| Sbjct 124 TAGGGGATGACTTGTGGTTAGGAGTGAAAGGCTAATCAAACCGGGAGATAGCTGGTTCTC 65 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTAT 238 |||||| |||||||||||| ||||| | | || || ||||||||||||||||||| Sbjct 64 CCCGAAATCTATTTAGGTAGAGCCTCGGACGAAT-ACTTACGGGGGTAGAGCACTGTTAA 6 Query 239 GGCTA 243 ||||| Sbjct 5 GGCTA 1 >seq362979 Length=304 Score = 212 bits (234), Expect = 2e-52 Identities = 193/241 (80%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| ||| || |||| ||||||||||||| | |||||| |||| Sbjct 241 CGAGTCTTAATAGGGCGTTTAGTTGCAGGGTATAGACCCGAAACCGGGCGATCTATCCAT 182 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||| ||||||| |||||| ||| |||||||||||| Sbjct 181 GGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACACACGTATGTTGAAAAAT 122 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 || ||||| ||||||| || |||||||||||| ||| | ||| ||||||||||||| Sbjct 121 GCGGTGATGACTTGTGGGTCGGAGTGAAAGGCTAATCAAGCCGGGAGATAGCTGGTTCTC 62 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC-AAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 |||||| |||||||||||| ||||| | | |||||| |||||||||||||||||| | Sbjct 61 CCCGAAAGCTATTTAGGTAGCGCCTCGGACGAACACCATTGGGGGTAGAGCACTGTTAAG 2 Query 240 G 240 | Sbjct 1 G 1 >seq12755 Length=1866 Score = 129 bits (142), Expect = 2e-27 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 264 AAACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCT 323 ||||| |||||||||||||| | || ||| || | |||||| | |||||||| Sbjct 1 AAACCGATGCAAACTCCGAATACCGATGAGTGATATC-CGGGAGACACACAGTGGGTGCT 59 Query 324 AAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGC 383 || |||| | |||||| || || || ||| ||||||||||||| || | || Sbjct 60 AACGTCCATTGTGGAGAGGGAAACAACCCAGACCGCCAGCTAAGGCCCCAAATTCCTAGT 119 Query 384 TAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCC 443 ||||| | ||||| || || || |||||||||||| |||||||| ||||||||| Sbjct 120 TAAGTGGGA--AACGAGGTGGGAAGGCATAGACAGCTAGGAGGTTGGCTTAGAAGCAGCC 177 Query 444 ATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | || |||||||| |||||| ||||||||||||||| Sbjct 178 A-TCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAG 213 >seq12756 Length=1019 Score = 125 bits (138), Expect = 2e-26 Identities = 161/218 (74%), Gaps = 7/218 (3%) Strand=Plus/Plus Query 265 AACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAG--TGAGGGCATGGGTGC 322 |||| ||||||||||||||| | || ||| | | |||||| | ||| |||||| Sbjct 2 AACCTTTGCAAACTCCGAATACCAATAAGTACAATCTCGGGAGACACACGGC--GGGTGC 59 Query 323 TAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAG 382 ||| |||||| || ||| || || || ||| |||||||||| ||| || || | Sbjct 60 TAACGTCCGTCGTGGAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTGTATG 119 Query 383 CTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGC 442 ||||| | ||||| || | ||| ||||||| |||| |||||||| |||||||| Sbjct 120 TTAAGTGGGA--AACGATGTGGAAAGGCTCAGACAGCCAGGAAGTTGGCTTAGAAGCAGC 177 Query 443 CATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || || |||||||| |||||| ||||||||||||||| Sbjct 178 CA-TCTTTTAAAGAAAGCGTAATAGCTCACTAGTCGAG 214 >seq245534 Length=245 Score = 122 bits (134), Expect = 3e-25 Identities = 128/165 (78%), Gaps = 4/165 (2%) Strand=Plus/Minus Query 317 GGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAA 376 ||||||||| |||||| | ||| || || || ||| |||||||||| ||| || Sbjct 191 GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAG 132 Query 377 TG-ACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGG 435 || | | ||||| | ||||| || || ||| ||||||||||||||||||||| | Sbjct 131 TGTATGGTTAAGTGGGA--AACGATGTGGGAAGGCTTAGACAGCTAGGATGTTGGCTTAG 74 Query 436 AAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||||||||| ||||||||||| |||||| ||||||||||||||| Sbjct 73 AAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTAGTCGAG 30 >seq40952 Length=1454 Score = 107 bits (118), Expect = 6e-21 Identities = 208/296 (70%), Gaps = 16/296 (5%) Strand=Plus/Minus Query 270 TTGCAAACTCCGAATGCGCATCAGTTTTA-CCGCGGGAGTGAGGGCATGGGTGCTAAGGT 328 ||||||||||||||| | ||| || ||| | || | ||| ||||||||| || Sbjct 1452 TTGCAAACTCCGAATACCGTAAAGTAATATCCGGGAGACACACGGC--GGGTGCTAACGT 1395 Query 329 CCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT 388 |||| ||||| || || || ||| ||||||||| ||| || | | || ||||| Sbjct 1394 CCGTCGTGAAGAGGGAAACAACCCAGACCGCCAGCTAAGGTCCCAAAGTCATAGTTAAGT 1335 Query 389 TAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCA 448 | ||||| || | || ||||||| |||| |||||||| |||||||||| || Sbjct 1334 GGGA--AACGATGTGGAAAGGCCCAGACAGCCAGGAGGTTGGCTTAGAAGCAGCCA-TCC 1278 Query 449 TTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGG---GCGTGGATAAT-AATCGG 504 |||||||| |||||| |||||||| ||| ||||||| ||| ||| || | ||| Sbjct 1277 TTTAAAGAAAGCGTAATAGCTCACTGGTC---GAGTCGGTCTGCGCGGAAGATGTAACGG 1221 Query 505 GTATTAAGTTGTCTACCGAAGCAGTGGGATCAT-TTA-TATGATCGGTAGGGGAGC 558 | ||| | | |||||||| | || |||| ||| |||| ||||||||||| Sbjct 1220 G-GCTAAACTATGCACCGAAGCTGCGGATTCATCTTAGGATGAGTGGTAGGGGAGC 1166 >seq257960 Length=1007 Score = 86.0 bits (94), Expect = 2e-14 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 21 AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGT 80 ||| || ||||||||||||||||| ||||||||| |||||| |||| ||||||| || Sbjct 921 AGTTGCAAGGTGTAGACCCGAAACCGAGTGATCTAGCCATGGGCAGGTTGAAGGTTGAGT 980 Query 81 AACACGCCCTGGAGGTCCGAACCCACT 107 |||| ||||||| ||||||| ||| Sbjct 981 AACATCAACTGGAGGACCGAACCGACT 1007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1680721118208