Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq392608 356 8e-96
seq337200 251 2e-64
seq337199 230 8e-58
seq362979 212 2e-52
seq12755 129 2e-27
seq12756 125 2e-26
seq245534 122 3e-25
seq40952 107 6e-21
seq257960 86.0 2e-14
>seq392608
Length=818
Score = 356 bits (394), Expect = 8e-96
Identities = 405/533 (76%), Gaps = 14/533 (3%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| |||||| |||| | | ||||| ||||||| ||||||||||||
Sbjct 282 CGAGTCTGAATAGGGCGCTTTAGTCAGTAGTGTTAGACGCGAAACCGTGTGATCTACCCA 341
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
||| |||| ||||| | |||||||| |||||| ||||||| | | ||||||||
Sbjct 342 TGGACAGGTTGAAGCTTTGGTAACACAAAGTGGAGGACCGAACCGT-TGACGTTGAAAAG 400
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| ||||||| ||||||||||||||||||||| || |||||| |||||||||| || ||
Sbjct 401 TCTTGGGATGATCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGGAAATAGCTCGTACT 460
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCG---GGGGTAGAGC-ACTGT 235
| |||||| |||||||| || | | | | | | | |||||||| ||||
Sbjct 461 CCCCGAAATGCATTTAGGTGCAGCGTTATGGTTAAAGTTATATAGAGGTAGAGCTACTGA 520
Query 236 TATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGC-ATCA-G 293
| ||| | |||| | | | | |||||| | | |||||||||||||| || | |
Sbjct 521 T-TGGATGCGGGGGCTTCACCGCCTACCAATTCCTGACAAACTCCGAATGCTATATAATG 579
Query 294 TTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCG 353
||| | | ||||||||| ||||||||||||||| | |||||||| ||||| ||
Sbjct 580 TTTCATAAC---AGTGAGGGCTTGGGTGCTAAGGTCCAAGTCCGAGAGGGAAAGAACCCA 636
Query 354 GACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413
||| ||||||||||| ||| |||| ||||||| || ||||| || || ||| |
Sbjct 637 GACCATCAGCTAAGGTCCCCAAATATATACTAAGTTGAAAGAACGAGGTTTGTCTGCATA 696
Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 756
Query 474 AGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526
||||||| | || || ||||||||||||||| | ||||| |||||||||
Sbjct 757 AGTCGAGCGGACGAGCATGGATAATAATCGGGCA-TAAGTATATTACCGAAGC 808
>seq337200
Length=248
Score = 251 bits (278), Expect = 2e-64
Identities = 201/241 (83%), Gaps = 1/241 (0%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| ||| |||||| ||| |||||| ||||||||||||| |||||||| ||||
Sbjct 241 CGAGTCTTAACTGGGCGAATAGTTGCTGGGATTAGACCCGAAACCTGGTGATCTAGCCAT 182
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
|| |||| ||||||| |||||| ||||||| ||||||| ||||||||||||||||
Sbjct 181 GGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCGACTAATGTTGAAAAAT 122
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
||| |||||| ||||| | |||||||||||| || ||||| ||| |||||||||||||
Sbjct 121 TAGCGGATGACTTGTGGCTGGGGGTGAAAGGCCAATCAAACCCGGAGATAGCTGGTTCTC 62
Query 181 TCCGAAAACTATTTAGGTAGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGG 240
||||| |||||||||||| |||||| ||||||| || |||||||||||||||||| ||
Sbjct 61 CTCGAAAGCTATTTAGGTAGCGCCTCAGGTATCACTATTGGGGGTAGAGCACTGTTAAGG 2
Query 241 C 241
|
Sbjct 1 C 1
>seq337199
Length=308
Score = 230 bits (254), Expect = 8e-58
Identities = 200/245 (82%), Gaps = 4/245 (2%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| ||| |||||| ||| || ||| ||||||||||||| |||||||| ||||
Sbjct 244 CGAGTCTTAACTGGGCGAATAGTTGCAAGGTATAGACCCGAAACCCGGTGATCTAGCCAT 185
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
| |||| ||||||| |||||| ||||||| ||||||||||||| |||||||| |
Sbjct 184 GAGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCCACTAACGTTGAAAAGT 125
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
|||||||||| ||||| |||| |||||||||||| ||||| ||| |||||||||||||
Sbjct 124 TAGGGGATGACTTGTGGTTAGGAGTGAAAGGCTAATCAAACCGGGAGATAGCTGGTTCTC 65
Query 181 TCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTAT 238
|||||| |||||||||||| ||||| | | || || |||||||||||||||||||
Sbjct 64 CCCGAAATCTATTTAGGTAGAGCCTCGGACGAAT-ACTTACGGGGGTAGAGCACTGTTAA 6
Query 239 GGCTA 243
|||||
Sbjct 5 GGCTA 1
>seq362979
Length=304
Score = 212 bits (234), Expect = 2e-52
Identities = 193/241 (80%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| || |||||| ||| || |||| ||||||||||||| | |||||| ||||
Sbjct 241 CGAGTCTTAATAGGGCGTTTAGTTGCAGGGTATAGACCCGAAACCGGGCGATCTATCCAT 182
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
|| |||| ||||||| |||||| ||||||| |||||| ||| ||||||||||||
Sbjct 181 GGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACACACGTATGTTGAAAAAT 122
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
|| ||||| ||||||| || |||||||||||| ||| | ||| |||||||||||||
Sbjct 121 GCGGTGATGACTTGTGGGTCGGAGTGAAAGGCTAATCAAGCCGGGAGATAGCTGGTTCTC 62
Query 181 TCCGAAAACTATTTAGGTAGTGCCTC-AAGTATCACCATCGGGGGTAGAGCACTGTTATG 239
|||||| |||||||||||| ||||| | | |||||| |||||||||||||||||| |
Sbjct 61 CCCGAAAGCTATTTAGGTAGCGCCTCGGACGAACACCATTGGGGGTAGAGCACTGTTAAG 2
Query 240 G 240
|
Sbjct 1 G 1
>seq12755
Length=1866
Score = 129 bits (142), Expect = 2e-27
Identities = 161/217 (74%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 264 AAACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCT 323
||||| |||||||||||||| | || ||| || | |||||| | ||||||||
Sbjct 1 AAACCGATGCAAACTCCGAATACCGATGAGTGATATC-CGGGAGACACACAGTGGGTGCT 59
Query 324 AAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGC 383
|| |||| | |||||| || || || ||| ||||||||||||| || | ||
Sbjct 60 AACGTCCATTGTGGAGAGGGAAACAACCCAGACCGCCAGCTAAGGCCCCAAATTCCTAGT 119
Query 384 TAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCC 443
||||| | ||||| || || || |||||||||||| |||||||| |||||||||
Sbjct 120 TAAGTGGGA--AACGAGGTGGGAAGGCATAGACAGCTAGGAGGTTGGCTTAGAAGCAGCC 177
Query 444 ATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
| || |||||||| |||||| |||||||||||||||
Sbjct 178 A-TCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAG 213
>seq12756
Length=1019
Score = 125 bits (138), Expect = 2e-26
Identities = 161/218 (74%), Gaps = 7/218 (3%)
Strand=Plus/Plus
Query 265 AACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAG--TGAGGGCATGGGTGC 322
|||| ||||||||||||||| | || ||| | | |||||| | ||| ||||||
Sbjct 2 AACCTTTGCAAACTCCGAATACCAATAAGTACAATCTCGGGAGACACACGGC--GGGTGC 59
Query 323 TAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAG 382
||| |||||| || ||| || || || ||| |||||||||| ||| || || |
Sbjct 60 TAACGTCCGTCGTGGAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAGTGTATG 119
Query 383 CTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGC 442
||||| | ||||| || | ||| ||||||| |||| |||||||| ||||||||
Sbjct 120 TTAAGTGGGA--AACGATGTGGAAAGGCTCAGACAGCCAGGAAGTTGGCTTAGAAGCAGC 177
Query 443 CATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
|| || |||||||| |||||| |||||||||||||||
Sbjct 178 CA-TCTTTTAAAGAAAGCGTAATAGCTCACTAGTCGAG 214
>seq245534
Length=245
Score = 122 bits (134), Expect = 3e-25
Identities = 128/165 (78%), Gaps = 4/165 (2%)
Strand=Plus/Minus
Query 317 GGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAA 376
||||||||| |||||| | ||| || || || ||| |||||||||| ||| ||
Sbjct 191 GGGTGCTAACGTCCGTCGTGAAAAGGGAAACAACCCAGACCGTCAGCTAAGGTCCCAAAG 132
Query 377 TG-ACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGG 435
|| | | ||||| | ||||| || || ||| ||||||||||||||||||||| |
Sbjct 131 TGTATGGTTAAGTGGGA--AACGATGTGGGAAGGCTTAGACAGCTAGGATGTTGGCTTAG 74
Query 436 AAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480
||||||||| ||||||||||| |||||| |||||||||||||||
Sbjct 73 AAGCAGCCA-TCATTTAAAGAAAGCGTAATAGCTCACTAGTCGAG 30
>seq40952
Length=1454
Score = 107 bits (118), Expect = 6e-21
Identities = 208/296 (70%), Gaps = 16/296 (5%)
Strand=Plus/Minus
Query 270 TTGCAAACTCCGAATGCGCATCAGTTTTA-CCGCGGGAGTGAGGGCATGGGTGCTAAGGT 328
||||||||||||||| | ||| || ||| | || | ||| ||||||||| ||
Sbjct 1452 TTGCAAACTCCGAATACCGTAAAGTAATATCCGGGAGACACACGGC--GGGTGCTAACGT 1395
Query 329 CCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGT 388
|||| ||||| || || || ||| ||||||||| ||| || | | || |||||
Sbjct 1394 CCGTCGTGAAGAGGGAAACAACCCAGACCGCCAGCTAAGGTCCCAAAGTCATAGTTAAGT 1335
Query 389 TAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCA 448
| ||||| || | || ||||||| |||| |||||||| |||||||||| ||
Sbjct 1334 GGGA--AACGATGTGGAAAGGCCCAGACAGCCAGGAGGTTGGCTTAGAAGCAGCCA-TCC 1278
Query 449 TTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCGG---GCGTGGATAAT-AATCGG 504
|||||||| |||||| |||||||| ||| ||||||| ||| ||| || | |||
Sbjct 1277 TTTAAAGAAAGCGTAATAGCTCACTGGTC---GAGTCGGTCTGCGCGGAAGATGTAACGG 1221
Query 505 GTATTAAGTTGTCTACCGAAGCAGTGGGATCAT-TTA-TATGATCGGTAGGGGAGC 558
| ||| | | |||||||| | || |||| ||| |||| |||||||||||
Sbjct 1220 G-GCTAAACTATGCACCGAAGCTGCGGATTCATCTTAGGATGAGTGGTAGGGGAGC 1166
>seq257960
Length=1007
Score = 86.0 bits (94), Expect = 2e-14
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 21 AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGT 80
||| || ||||||||||||||||| ||||||||| |||||| |||| ||||||| ||
Sbjct 921 AGTTGCAAGGTGTAGACCCGAAACCGAGTGATCTAGCCATGGGCAGGTTGAAGGTTGAGT 980
Query 81 AACACGCCCTGGAGGTCCGAACCCACT 107
|||| ||||||| ||||||| |||
Sbjct 981 AACATCAACTGGAGGACCGAACCGACT 1007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1680721118208
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