Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq478353 244 2e-62
seq35889 217 3e-54
seq424977 178 2e-42
seq257960 174 3e-41
seq443020 172 1e-40
seq199094 158 2e-36
seq492919 129 1e-27
seq137937 118 2e-24
seq266510 116 7e-24
>seq478353
Length=548
Score = 244 bits (270), Expect = 2e-62
Identities = 253/325 (78%), Gaps = 11/325 (3%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||| | ||||||||| ||||| | | |||||||||| ||||| |||| ||||| |
Sbjct 130 AGCGCATACGGTGGATGC-TTGGCAGTCAGAGGCGATGAAAGACGTGATAGCCTGCGAAA 188
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
|||| |||||||| ||||||| ||||||||||| |||| || |||||||| ||||| |
Sbjct 189 AGCTTCGGGGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCACC 248
Query 121 ---CCT---TTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAAC 174
| | || ||| || | |||||||||||||| | |||||||| || ||||
Sbjct 249 TAACATAAGTTAGGT-ATCTTAAGCTGAATACATAGGCTTAAGAAGCGAACCAGGGGAAC 307
Query 175 TGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAG 234
||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||
Sbjct 308 TGAAACATCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAG 367
Query 235 CGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGG 294
|||| |||| |||| ||| | || |||| || ||| |||| ||||||||| |
Sbjct 368 CGAACGGGGACCAGCCCTTAAGCTGTA-TTGA--TGTTAGCGGAACGCTCTGGAAAGTGC 424
Query 295 AGCCATAGCGGGTGATAGCCCCGTA 319
||||||| |||||||||||| |||
Sbjct 425 GGCCATAGTGGGTGATAGCCCTGTA 449
>seq35889
Length=586
Score = 217 bits (240), Expect = 3e-54
Identities = 244/318 (77%), Gaps = 9/318 (3%)
Strand=Plus/Minus
Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65
||| ||||||||||||||| || ||||||||||||||||| || ||||||||||||
Sbjct 559 ACACGGTGGATGCCTTGGCAGTTGGAGGCGATGAAGGACGTATTAACTTGCGATAAGCCT 500
Query 66 CGGGGAGTGAGCAAACA-CACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT 124
| || || ||| | ||||| || | ||||||||||||||||||||| | |
Sbjct 499 AGTCAAGCTAGTAAAAAGCACTT-GAGACTAGGATTTCCGAATGGGGAAACCCACCTGCT 441
Query 125 TG--GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACAT 182
|| ||| || | |||||||||||||| | | |||||||||| ||||||||||||
Sbjct 440 TGCAGGT-ATCGTTAACTGAATACATAGGTTAACGAGGCGAACGCGGAGAACTGAAACAT 382
Query 183 CTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGG 242
||||||| | | ||||||||||||||||||||||||| ||||||| |||||||||||| |
Sbjct 381 CTAAGTACCCGTAGGAAAAGAAATCAACCGAGATTCCGAAAGTAGCGGCGAGCGAAATCG 322
Query 243 GATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCT-CTGGAAATAGGAGCCATA 301
|| |||| ||| || | || | || || ||||| || ||||||| | | |||
Sbjct 321 GAACAGCCCTTA--AGCTTATT-ATGTGTTAATGGAAGGCTGCTGGAAAGCGCCACGATA 265
Query 302 GCGGGTGATAGCCCCGTA 319
||||||||| ||||||
Sbjct 264 CAGGGTGATAGTCCCGTA 247
>seq424977
Length=310
Score = 178 bits (196), Expect = 2e-42
Identities = 220/296 (74%), Gaps = 14/296 (5%)
Strand=Plus/Plus
Query 31 AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGA 90
||||||||||||||||| || ||||||| |||| || ||| || || | |||||
Sbjct 5 AGGCGATGAAGGACGTAATAACTTGCGAAAAGCGTTGGCGAGCTAGTAATAAGCATTTGA 64
Query 91 TCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTG---GGTCATTGCATGC--TGAATA 145
| ||| ||||||||||||||||||||| | |||||| ||||| ||||||
Sbjct 65 GCTAACGATATCCGAATGGGGAAACCCGGCCACATAAGTGGTCAT--CATGCAGTGAATA 122
Query 146 CATAG--GTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGA 203
||||| | ||| | |||||| || ||||||||||||||||||| | |||||||||
Sbjct 123 CATAGCTGCATG--AGGCGAACCTGGGGAACTGAAACATCTAAGTACCCAGAGGAAAAGA 180
Query 204 AATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGAGATAGT 263
||||||||||||||||| ||||| |||||||||| ||||| |||| ||| | |
Sbjct 181 AATCAACCGAGATTCCCCTAGTAGCGGCGAGCGAACGGGGATTAGCCCTTAAG---TCTA 237
Query 264 TGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCGTA 319
|| || ||||||||| |||||| ||| | ||||||||||||||||
Sbjct 238 TGGGGTGTTAGTGGAATGAGTTGGAAAGCTCAGCGGCACAGGGTGATAGCCCCGTA 293
>seq257960
Length=1007
Score = 174 bits (192), Expect = 3e-41
Identities = 228/313 (73%), Gaps = 6/313 (2%)
Strand=Plus/Plus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||||||||||| | | ||||||||||||||||| || ||||||| |||| ||
Sbjct 299 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTAATAACTTGCGAAAAGCGTTGGC 358
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC--CCTTTGG 127
||| || || | ||||| | ||| ||||||||||||||||| | | |
Sbjct 359 GAGCTAGTAATAAGCATTTGAGCTAACGATATCCGAATGGGGAAACCCACATGCATAAGC 418
Query 128 GTC-ATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAA 186
| || || ||||||||||| || | || ||| ||| ||||||||||||||||
Sbjct 419 ATGTATCACAACATGAATACATAGTGTTGTGAGGCAAACCCGGGGAACTGAAACATCTAA 478
Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246
||| | | |||||||||||||||||||||||||| ||||| |||||||||| |||||
Sbjct 479 GTACCCGGAGGAAAAGAAATCAACCGAGATTCCCCTAGTAGCGGCGAGCGAACGGGGATT 538
Query 247 AGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGG 306
|||| ||| | | || || ||||||||| |||||| ||| | |||
Sbjct 539 AGCCCTTAAG---TCTATGGGGTGTTAGTGGAATGTGTTGGAAAGCACAGCGGCACAGGG 595
Query 307 TGATAGCCCCGTA 319
|||||||||||||
Sbjct 596 TGATAGCCCCGTA 608
>seq443020
Length=407
Score = 172 bits (190), Expect = 1e-40
Identities = 236/322 (73%), Gaps = 16/322 (5%)
Strand=Plus/Plus
Query 6 ACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTG 65
||| ||||||||||||||| | | ||||||||||||||||| || ||||||||||||
Sbjct 3 ACACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTATTAACTTGCGATAAGCCC 62
Query 66 CGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT- 124
| || || ||| | |||| | ||||||||||||||||||||| |||
Sbjct 63 AGATTAGGCAGTAAAAGCCACTTGAGTCTGGGATTTCCGAATGGGGAAACCCA---CTTG 119
Query 125 --TGGGTCATTG-CATG--CTGAATACATAGGT--ATGCAAAGCGAACGCGGCGAACTGA 177
| | | | ||| |||||||||||||| ||| | || ||| || |||||||
Sbjct 120 CATAAGCAAGTATCATTAACTGAATACATAGGTTAATG--AGGCAAACCGGGGGAACTGA 177
Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237
|||||||||||| | ||||| ||||||||||||||||||| ||||| |||||||||
Sbjct 178 AACATCTAAGTACCCCGAGGAAGAGAAATCAACCGAGATTCCGGTAGTAGCGGCGAGCGA 237
Query 238 AATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGC 297
|| |||| |||| ||| || ||||| | ||| |||| ||||||| |||
Sbjct 238 AACCGGATTAGCCCTTA--AGCTAGTT-CTGCGTTAGGTGAATGTACTGGAAAGTACAGC 294
Query 298 CATAGCGGGTGATAGCCCCGTA 319
||| ||||||||||||||||
Sbjct 295 GATACAGGGTGATAGCCCCGTA 316
>seq199094
Length=690
Score = 158 bits (174), Expect = 2e-36
Identities = 229/316 (72%), Gaps = 12/316 (4%)
Strand=Plus/Minus
Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69
||||||||||| ||| | | |||||||||||||||| || |||| ||||||| |||
Sbjct 409 GGTGGATGCCTAGGCAGTCAGAGGCGATGAAGGACGTGTTAATCTGCGTTAAGCTGTGGG 350
Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTG- 126
|||| ||| | | || |||| ||||||||||||||||| ||||| | || |
Sbjct 349 GAGTTGATAAAAAG-CGTTAATCCACAGATTTCCGAATGGGGGAACCCACCTTACTAAGT 291
Query 127 --GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCT 184
||| || | ||||||||||| | | |||||||| || ||||||||||||||
Sbjct 290 AAGGT-ATCGTTAAGTGAATACATAGCTTAACGAAGCGAACCGGGAGAACTGAAACATCT 232
Query 185 AAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244
||||| | ||||||||||||||| ||||| ||| ||||| |||||||||| |||
Sbjct 231 AAGTACCCCGAGGAAAAGAAATCAATAGAGATACCCTTAGTAGCGGCGAGCGAACGGGGT 172
Query 245 TGAGCCTTTACG-AGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGC 303
|||| ||| | || | | ||| | || ||||| |||||||| | |||
Sbjct 171 CTAGCCCTTAAGCAGTT--TGGAA--GTTAATGGAAGAATCTGGAAAGTTTCACGATACA 116
Query 304 GGGTGATAGCCCCGTA 319
||||||||| ||||||
Sbjct 115 GGGTGATAGTCCCGTA 100
>seq492919
Length=384
Score = 129 bits (142), Expect = 1e-27
Identities = 178/247 (72%), Gaps = 18/247 (7%)
Strand=Plus/Plus
Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67
|||| |||||||||||| | | |||||||||||| ||| || ||||| ||||| ||
Sbjct 129 ATGGGGGATGCCTTGGCTCTCAGAGGCGATGAAGGGCGTGATAAGCTGCGAAAAGCTACG 188
Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127
|||| ||||| |||| |||||||| | || | |||||||| ||||| || ||
Sbjct 189 GGGAC-GAGCACACACCGATTGATCCGTAAATACCTGAATGGGGCAACCCA---CTATG- 243
Query 128 GTCATTGCATGCTGAATACA----TAGGTATGCAAAGCGAACGCGGCGAACTGAAACATC 183
||| | | | |||| ||||| ||||| | || |||||||||||||
Sbjct 244 ----TTGAAGACATAGTACACCGATAGGTGGGCAAACC-----CGCTGAACTGAAACATC 294
Query 184 TAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGG 243
||||||| | |||| |||||| ||| | |||||| ||||||||||||||||| ||
Sbjct 295 TAAGTAGGCGGAGGAGAAGAAAACAAAAGTGATTCCGTAAGTAGTGGCGAGCGAACGCGG 354
Query 244 ATGAGCC 250
|| ||||
Sbjct 355 ATTAGCC 361
>seq137937
Length=258
Score = 118 bits (130), Expect = 2e-24
Identities = 153/207 (74%), Gaps = 7/207 (3%)
Strand=Plus/Plus
Query 9 TGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG 68
|||||||||||||||| ||| |||||||||||||||| || ||||| |||| ||
Sbjct 53 TGGTGGATGCCTTGGCAGTTAGAGGCGATGAAGGACGTGTTAATCTGCGAAAAGCGTTGG 112
Query 69 GGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC--CCTTT 125
||| ||| ||| || || | || ||| ||||||||||||||||| || |
Sbjct 113 TGAGGTGATAAAA-ACCGTTATAGCCAACGATGTCCGAATGGGGAAACCCACTTACCATA 171
Query 126 GGGTC---ATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACAT 182
||| || || ||||||||||| ||| | |||||||| || ||||||||||||
Sbjct 172 AGGTAGGTATCATATAGTGAATACATAGCTATACGAAGCGAACCGGGAGAACTGAAACAT 231
Query 183 CTAAGTAGCTGCAGGAAAAGAAATCAA 209
|| |||| | |||||||||||||||
Sbjct 232 CTCAGTACCCCTAGGAAAAGAAATCAA 258
>seq266510
Length=454
Score = 116 bits (128), Expect = 7e-24
Identities = 135/180 (75%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 140 TGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAA 199
||||||||||| ||| |||||||| || ||||||||||||||||||| | |||||
Sbjct 424 TGAATACATAGCTATATGAAGCGAACCGGGAGAACTGAAACATCTAAGTACCCCGAGGAA 365
Query 200 AAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGAGA 259
|||||||||||||||||| | ||||| |||||||||| | || |||||| ||
Sbjct 364 AAGAAATCAACCGAGATTTCGTTAGTAGCGGCGAGCGAACGCGAATCAGCCTT---AAGC 308
Query 260 TAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCGTA 319
| ||| | |||| |||| |||||||| | | ||| ||||||||| ||||||
Sbjct 307 TTATTG-GGCGCTAGTAGAATGTTCTGGAAAGGACAACGATACAGGGTGATAGTCCCGTA 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913573789632
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