Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq443255 286 7e-75 seq458515 264 2e-68 seq312118 170 4e-40 seq142421 156 9e-36 seq127494 140 7e-31 seq190646 127 4e-27 seq268572 114 3e-23 seq142356 86.0 1e-14 >seq443255 Length=443 Score = 286 bits (316), Expect = 7e-75 Identities = 262/331 (79%), Gaps = 0/331 (0%) Strand=Plus/Minus Query 27 CTTATTCATAAGGTACATACAAGCTCCCACACGTGGAAGGTTTTATTCCCTTATAAAAGA 86 ||||||| || |||| ||| || | |||| | || ||| |||| || ||||| Sbjct 441 CTTATTCTTACAGTACCGTCAATCTATCTCACGAGATAGTGTTTCTTCCTGTACAAAAGC 382 Query 87 AGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCC 146 |||||||||||| ||| ||| ||||||| ||||| | ||||||||||||||| ||||| Sbjct 381 AGTTTACAATCCATAGGACCGTCATCCTGCACGCGGCATGGCTGGTTCAGACTTGCGTCC 322 Query 147 ATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAA 206 |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| Sbjct 321 ATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 262 Query 207 TGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCG 266 ||||||||| || |||||||| ||||||| ||||||||| || ||| ||||||||| Sbjct 261 TGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGTCTTGGTAAGCCGTTACCTTA 202 Query 267 CCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTTAATGATGATACCA 326 || |||| ||||||| |||||| | |||| | |||||| |||||||||| | | Sbjct 201 CCAACTAACTAATGGGACGCATGCTCATCTTTTACCGATAAATCTTTAATTAAATCTTGA 142 Query 327 TGCAATCTCATCATACCATCAGGTATTAATC 357 ||| | | | |||| || ||||||||||| Sbjct 141 TGCCAATACTTAATACTATAAGGTATTAATC 111 >seq458515 Length=281 Score = 264 bits (292), Expect = 2e-68 Identities = 230/283 (81%), Gaps = 6/283 (2%) Strand=Plus/Plus Query 78 TATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGA 137 |||||||| |||||||||||| ||| ||| ||||||| ||||| | ||||||| |||| Sbjct 2 TATAAAAGCAGTTTACAATCCATAGGACCGTCATCCTGCACGCGGCATGGCTGGATCAGG 61 Query 138 CTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCT 197 || || |||||| ||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 62 CTTGCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCT 121 Query 198 CAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCC 257 |||| ||| ||||||||| || |||||||| ||||||| ||||||||| || ||| ||| Sbjct 122 CAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGTCTTGGTAAGCC 181 Query 258 GTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTTAATG 317 |||||| || |||| ||||||| |||||| | |||| | ||||||| ||||||||| Sbjct 182 GTTACCTTACCAACTAACTAATGGGACGCATGCTCATCTTTCACCGATAAATCTTTAA-- 239 Query 318 ATGATACC---ATGCAATCTCATCATACCATCAGGTATTAATC 357 || | | | |||| | || | ||| || ||||||||||| Sbjct 240 AT-ACATCTTGATGCCAAGTCGTATTACTATAAGGTATTAATC 281 >seq312118 Length=428 Score = 170 bits (188), Expect = 4e-40 Identities = 153/191 (80%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||||||| ||| ||||| || ||||| | ||||||| |||| || ||| |||| Sbjct 422 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATGGCTGGATCAGGCTTTCGCCCAT 364 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| |||||||||||||||||||| || Sbjct 363 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 304 Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268 || || | |||||||||| | || ||||| | || |||| ||| ||||| | || Sbjct 303 TGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACC 244 Query 269 TACTACCTAAT 279 |||| ||||| Sbjct 243 AACTAGCTAAT 233 >seq142421 Length=429 Score = 156 bits (172), Expect = 9e-36 Identities = 154/198 (78%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 |||| | ||||||| ||| || ||||| || ||||| | |||||| |||| || | Sbjct 199 AAAGTACTTTACAACCCGAAGG-CCTTCTTCACACACGCGGCATGGCTGCATCAGGCTTT 141 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||| Sbjct 140 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 81 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||| ||||| || | |||||||||| | ||| ||||| | || |||| ||| ||| Sbjct 80 CCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTA 21 Query 262 CCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 20 CCTCACCAACTAGCTAAT 3 >seq127494 Length=1980 Score = 140 bits (154), Expect = 7e-31 Identities = 204/287 (71%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCC------ 54 |||||||||||| |||||||||| ||||||||| || || || ||| Sbjct 425 GGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCTGCAGCTAATGTCATCGTCCATGGGTA 366 Query 55 --ACACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATC 112 | | |||| || || ||| || | |||| ||||||| | || ||||| || Sbjct 365 TTAACCATGGA--GTCTTCTTCACTGCTTAAAGTGCTTTACAACCAAAAGG-CCTTCTTC 309 Query 113 CTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCC 172 ||||| | ||||||| |||| | || |||||| |||||||||| |||||||||| Sbjct 308 ACACACGCGGCATGGCTGGATCAGGGTTTCCCCCATTGTCCAATATTCCCCACTGCTGCC 249 Query 173 TCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCC 232 |||||||||||| || |||||||||||| || ||||| || | |||||||||| | Sbjct 248 TCCCGTAGGAGTCCGGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCTCTCAGACCAG 189 Query 233 CTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 ||| ||||| | | ||| |||| ||||||| || ||| ||||| Sbjct 188 CTACAGATCGTCGCCATGGTAGGCCTTTACCCCACCATCTAGCTAAT 142 >seq190646 Length=382 Score = 127 bits (140), Expect = 4e-27 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 145 CCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCC 204 |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct 381 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 322 Query 205 AATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCC 264 | ||||| || | |||||||||| | ||| ||||| | || |||| || ||||| Sbjct 321 AGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCTCTTACCT 262 Query 265 CGCCTACTACCTAAT 279 | || || | ||||| Sbjct 261 CACCAACAAGCTAAT 247 >seq268572 Length=1256 Score = 114 bits (126), Expect = 3e-23 Identities = 141/191 (74%), Gaps = 9/191 (5%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||| ||||||||| |||| |||| | ||||| Sbjct 190 GGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCTGTCGGTAACGTCAAGA-CAGTCACGT 132 Query 61 GGAAGGTT-------TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCC 113 |||| || |||| | |||| ||||||||||| ||| ||||| || Sbjct 131 ATTAGGTAACTGCCCTTCCTCCCAACTTAAAGTGCTTTACAATCCGAAGA-CCTTCTTCA 73 Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173 ||||| | ||||||| |||| || ||| |||||| |||||||||| ||||||||||| Sbjct 72 CACACGCGGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCT 13 Query 174 CCCGTAGGAGT 184 ||||||||||| Sbjct 12 CCCGTAGGAGT 2 >seq142356 Length=252 Score = 86.0 bits (94), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA-AGCTCCCACACG 59 ||||||||||||||||||||||| ||||| ||| ||| || |||| | || | Sbjct 193 GGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGCGAGTAACGTCACAGCTGC-ACTCT 135 Query 60 TGGAAGGT------TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCC 113 || || ||| ||| | |||| ||||||| ||| | | ||||| || Sbjct 134 ATTAAAGTACAACCTTTCCTCCTCGCTGAAAGTGCTTTACAACCCGAA-AGCCTTCTTCA 76 Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173 ||||| | |||||| |||| || || |||||| ||||||||| ||||||||||| Sbjct 75 CACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCT 16 Query 174 CCCGTAGGAGTTTGG 188 ||||||||||| ||| Sbjct 15 CCCGTAGGAGTCTGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1063183434624