Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq443255 286 7e-75
seq458515 264 2e-68
seq312118 170 4e-40
seq142421 156 9e-36
seq127494 140 7e-31
seq190646 127 4e-27
seq268572 114 3e-23
seq142356 86.0 1e-14
>seq443255
Length=443
Score = 286 bits (316), Expect = 7e-75
Identities = 262/331 (79%), Gaps = 0/331 (0%)
Strand=Plus/Minus
Query 27 CTTATTCATAAGGTACATACAAGCTCCCACACGTGGAAGGTTTTATTCCCTTATAAAAGA 86
||||||| || |||| ||| || | |||| | || ||| |||| || |||||
Sbjct 441 CTTATTCTTACAGTACCGTCAATCTATCTCACGAGATAGTGTTTCTTCCTGTACAAAAGC 382
Query 87 AGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCC 146
|||||||||||| ||| ||| ||||||| ||||| | ||||||||||||||| |||||
Sbjct 381 AGTTTACAATCCATAGGACCGTCATCCTGCACGCGGCATGGCTGGTTCAGACTTGCGTCC 322
Query 147 ATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAA 206
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct 321 ATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAG 262
Query 207 TGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCG 266
||||||||| || |||||||| ||||||| ||||||||| || ||| |||||||||
Sbjct 261 TGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGTCTTGGTAAGCCGTTACCTTA 202
Query 267 CCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTTAATGATGATACCA 326
|| |||| ||||||| |||||| | |||| | |||||| |||||||||| | |
Sbjct 201 CCAACTAACTAATGGGACGCATGCTCATCTTTTACCGATAAATCTTTAATTAAATCTTGA 142
Query 327 TGCAATCTCATCATACCATCAGGTATTAATC 357
||| | | | |||| || |||||||||||
Sbjct 141 TGCCAATACTTAATACTATAAGGTATTAATC 111
>seq458515
Length=281
Score = 264 bits (292), Expect = 2e-68
Identities = 230/283 (81%), Gaps = 6/283 (2%)
Strand=Plus/Plus
Query 78 TATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGA 137
|||||||| |||||||||||| ||| ||| ||||||| ||||| | ||||||| ||||
Sbjct 2 TATAAAAGCAGTTTACAATCCATAGGACCGTCATCCTGCACGCGGCATGGCTGGATCAGG 61
Query 138 CTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCT 197
|| || |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 62 CTTGCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCT 121
Query 198 CAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCC 257
|||| ||| ||||||||| || |||||||| ||||||| ||||||||| || ||| |||
Sbjct 122 CAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCATCGTAGTCTTGGTAAGCC 181
Query 258 GTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTACACCGATGAATCTTTAATG 317
|||||| || |||| ||||||| |||||| | |||| | ||||||| |||||||||
Sbjct 182 GTTACCTTACCAACTAACTAATGGGACGCATGCTCATCTTTCACCGATAAATCTTTAA-- 239
Query 318 ATGATACC---ATGCAATCTCATCATACCATCAGGTATTAATC 357
|| | | | |||| | || | ||| || |||||||||||
Sbjct 240 AT-ACATCTTGATGCCAAGTCGTATTACTATAAGGTATTAATC 281
>seq312118
Length=428
Score = 170 bits (188), Expect = 4e-40
Identities = 153/191 (80%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148
||||||||||| ||| ||||| || ||||| | ||||||| |||| || ||| ||||
Sbjct 422 TTTACAATCCGAAGA-CCTTCTTCACACACGCGGCATGGCTGGATCAGGCTTTCGCCCAT 364
Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208
|| |||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 363 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 304
Query 209 TGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCC 268
|| || | |||||||||| | || ||||| | || |||| ||| ||||| | ||
Sbjct 303 TGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACC 244
Query 269 TACTACCTAAT 279
|||| |||||
Sbjct 243 AACTAGCTAAT 233
>seq142421
Length=429
Score = 156 bits (172), Expect = 9e-36
Identities = 154/198 (78%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141
|||| | ||||||| ||| || ||||| || ||||| | |||||| |||| || |
Sbjct 199 AAAGTACTTTACAACCCGAAGG-CCTTCTTCACACACGCGGCATGGCTGCATCAGGCTTT 141
Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201
|| |||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct 140 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT 81
Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261
||| ||||| || | |||||||||| | ||| ||||| | || |||| ||| |||
Sbjct 80 CCCAGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCCATTA 21
Query 262 CCCCGCCTACTACCTAAT 279
|| | || |||| |||||
Sbjct 20 CCTCACCAACTAGCTAAT 3
>seq127494
Length=1980
Score = 140 bits (154), Expect = 7e-31
Identities = 204/287 (71%), Gaps = 11/287 (4%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCC------ 54
|||||||||||| |||||||||| ||||||||| || || || |||
Sbjct 425 GGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCTGCAGCTAATGTCATCGTCCATGGGTA 366
Query 55 --ACACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATC 112
| | |||| || || ||| || | |||| ||||||| | || ||||| ||
Sbjct 365 TTAACCATGGA--GTCTTCTTCACTGCTTAAAGTGCTTTACAACCAAAAGG-CCTTCTTC 309
Query 113 CTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCC 172
||||| | ||||||| |||| | || |||||| |||||||||| ||||||||||
Sbjct 308 ACACACGCGGCATGGCTGGATCAGGGTTTCCCCCATTGTCCAATATTCCCCACTGCTGCC 249
Query 173 TCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCC 232
|||||||||||| || |||||||||||| || ||||| || | |||||||||| |
Sbjct 248 TCCCGTAGGAGTCCGGGCCGTGTCTCAGTCCCGGTGTGGCTGATCATCCTCTCAGACCAG 189
Query 233 CTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
||| ||||| | | ||| |||| ||||||| || ||| |||||
Sbjct 188 CTACAGATCGTCGCCATGGTAGGCCTTTACCCCACCATCTAGCTAAT 142
>seq190646
Length=382
Score = 127 bits (140), Expect = 4e-27
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 145 CCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCC 204
|||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 381 CCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 322
Query 205 AATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCC 264
| ||||| || | |||||||||| | ||| ||||| | || |||| || |||||
Sbjct 321 AGTGTGGCTGATCATCCTCTCAGACCAGCTAGGGATCGTCGCCTTGGTGAGCTCTTACCT 262
Query 265 CGCCTACTACCTAAT 279
| || || | |||||
Sbjct 261 CACCAACAAGCTAAT 247
>seq268572
Length=1256
Score = 114 bits (126), Expect = 3e-23
Identities = 141/191 (74%), Gaps = 9/191 (5%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||| ||||||||| |||| |||| | |||||
Sbjct 190 GGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCTGTCGGTAACGTCAAGA-CAGTCACGT 132
Query 61 GGAAGGTT-------TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCC 113
|||| || |||| | |||| ||||||||||| ||| ||||| ||
Sbjct 131 ATTAGGTAACTGCCCTTCCTCCCAACTTAAAGTGCTTTACAATCCGAAGA-CCTTCTTCA 73
Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173
||||| | ||||||| |||| || ||| |||||| |||||||||| |||||||||||
Sbjct 72 CACACGCGGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCT 13
Query 174 CCCGTAGGAGT 184
|||||||||||
Sbjct 12 CCCGTAGGAGT 2
>seq142356
Length=252
Score = 86.0 bits (94), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 9/195 (5%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACA-AGCTCCCACACG 59
||||||||||||||||||||||| ||||| ||| ||| || |||| | || |
Sbjct 193 GGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGCGAGTAACGTCACAGCTGC-ACTCT 135
Query 60 TGGAAGGT------TTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCC 113
|| || ||| ||| | |||| ||||||| ||| | | ||||| ||
Sbjct 134 ATTAAAGTACAACCTTTCCTCCTCGCTGAAAGTGCTTTACAACCCGAA-AGCCTTCTTCA 76
Query 114 TTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCT 173
||||| | |||||| |||| || || |||||| ||||||||| |||||||||||
Sbjct 75 CACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCT 16
Query 174 CCCGTAGGAGTTTGG 188
||||||||||| |||
Sbjct 15 CCCGTAGGAGTCTGG 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1063183434624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |