Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq459 444 2e-122
seq116726 100 9e-19
>seq459
Length=1892
Score = 444 bits (492), Expect = 2e-122
Identities = 421/530 (79%), Gaps = 28/530 (5%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
|||||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||
Sbjct 623 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 564
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 563 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 504
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||
Sbjct 503 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 444
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||||||||||||||||||||| ||| |||||| | |||||| |
Sbjct 443 AGGCACAAAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 384
Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA---------GGAGCCCCG 288
| ||| | ||||| | | | ||||| || ||||||| || |||||
Sbjct 383 ACGAGGGCCAGCGATCAGCTCGAGGTTATCTAGAGTCACCAAAGCGGCCGGGGCACCCCG 324
Query 289 -AAGG--------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGG 336
||| || | |||||| ||| |||||| ||| | | || || ||| | |
Sbjct 323 TGAGGAGCACCCCGCATGGGTTTTGGGTCTGATAAATGCACGCGTCCCCGGAGGTCAGCG 264
Query 337 GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTAT 394
|| ||||||||||||||| ||||| |||| |||||||| ||| || | | | ||
Sbjct 263 CCCGTTGGCATGTATTAGCTCTGGAATTGCCACAGTTATCCAAGTAACGTGA-GAGCGAT 205
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|||| ||| ||||||||||||||||||||||||||||||||||||| | | | ||
Sbjct 204 CAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTA 145
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct 144 CTTAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 96
>seq116726
Length=1861
Score = 100 bits (110), Expect = 9e-19
Identities = 80/95 (84%), Gaps = 1/95 (1%)
Strand=Plus/Plus
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468
|||||| ||||| |||||| |||||||| |||| | || ||||||||| ||||||
Sbjct 1069 CTGATTAAATGACCCATTCACAGTTTCATTGTACCGGCCATTTGTACTTAGACTTGCATG 1128
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
||||||||||| ||||||||||||| |||||||||
Sbjct 1129 GCTTAATCTTTAAGACAAGCATATG-CTACTGGCA 1162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1502462817792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |