Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq450991 230 7e-56
seq509368 205 3e-48
seq522123 147 7e-31
seq507726 113 1e-20
seq505753 96.9 1e-15
>seq450991
Length=1254
Score = 230 bits (254), Expect = 7e-56
Identities = 557/833 (67%), Gaps = 28/833 (3%)
Strand=Plus/Minus
Query 2100 TCCAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGA 2159
||||||||||||||||||||| ||||| || |||| | | | | | |||||
Sbjct 949 TCCAATGATGAACATCATCAATGGTGGCGAACATGCAGATAACTCTGTAGATATTCAAGA 890
Query 2160 ATTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGA 2219
|||||||| ||| | ||| || || ||| |||| || || ||| || ||
Sbjct 889 GTTTATGATCCAACCAGTTGGCGCTAAAAACTTCCGTGAAGGTCTACGCATGGGCGCAGA 830
Query 2220 AATCTTCCACGCGCTTAAGAAAATCCTTAAAGAACGTGGACTTGAAACAGCCGTAGGTGA 2279
||| || ||| || ||| | || |||| | || | |||||| ||||||||
Sbjct 829 AATATTTCACAGCCTAGCTAAAGTACTAAAAGCAGACGGTCACTCAACAGCGGTAGGTGA 770
Query 2280 CGAAGGTGGTTTCGCACCT--CGTTTCGACGGAACTGAAGATGGTGTTGAAACTATCATC 2337
|||||||||||| ||||| | || | | ||| |||| | | | | || |
Sbjct 769 CGAAGGTGGTTTTGCACCAAACCTTGCATCT-AAC-GAAGCGGCACTAGCTGCAATTAAA 712
Query 2338 AAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTAT--TTATCGGACTTGACT 2395
|||| | | | ||| || || | | |||||||||| | ||| || ||||| |
Sbjct 711 GTAGCTGTTGCAAATGCAGGCTACGAGCTAGGTAAAGACATTACATTAGCG--CTTGATT 654
Query 2396 GTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACTACACTAAATTTGAAG 2455
|||| | ||||| || ||||| |||| || ||||| || || |||
Sbjct 653 GTGCTGCCTCTGAGTTTTACGACAAAGAAGCAAATATTTAC---------AATCTTAAAG 603
Query 2456 GTGAAGGCGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTTGAAGAATTGGTTA 2515
|||||||| |||| ||| ||| |||| | | || | | |||| || |
Sbjct 602 GTGAAGGCAAAAA-GTTC--ACTTCTGAAGAATTTAACTTCTTCTTACAAGATTTAACTC 546
Query 2516 ACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGG-TTGG 2574
| | ||||||||| | ||||||||||||| | || || |||||||| || || |
Sbjct 545 AGCAGTACCCAATCGTGTCTATCGAAGATGGCCTTGATGAGTCTGACTGGGATGGCTTTG 486
Query 2575 AAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTA 2634
| | | ||| ||| | |||| |||| | ||||| || |||||||| || || |||
Sbjct 485 CACAC-CAAACTAAACTAATGGGTGATAAAATCCAATTAGTGGGTGACGATTTGTTTGTA 427
Query 2635 ACTAACACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCT---GCTAACTCAATCCTT 2691
|| || ||| | || ||| || | || ||| | |||||||||||| |
Sbjct 426 ACCAATACTA---AGATTTTAAAGCGTGGTATCGACAACGGTATTGCTAACTCAATCTTA 370
Query 2692 ATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAA 2751
|| || |||||||||| ||| |||| ||||| || || | || || ||||||| |||
Sbjct 369 ATTAAGTTTAACCAAATTGGTTCTTTAACTGAGACATTAGCTGCAATTAAAATGGCTAAA 310
Query 2752 GAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATC 2811
|| ||||| | ||||| || | || || |||||||| ||||| ||||||||||| ||
Sbjct 309 GATGCTGGTTTCACAGTTGTTATCTCTCATCGTTCAGGCGAAACAGAAGATTCAACCATT 250
Query 2812 GCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACT 2871
|||||| | ||||| | || || |||||||| || || |||||||| ||| ||
Sbjct 249 GCTGATTTAGCAGTAGGTACAGCTGCAGGTCAAATCAAAACTGGTTCATTAAGCCGTTCT 190
Query 2872 GACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGA 2924
|| ||| ||||||| ||||||||||| |||||||| ||||| ||| | || ||
Sbjct 189 GATCGTGTTGCTAAGTACAACCAATTTCTTCGTATTGAAGAGCAATTAGGCGA 137
>seq509368
Length=480
Score = 205 bits (226), Expect = 3e-48
Identities = 282/392 (72%), Gaps = 2/392 (1%)
Strand=Plus/Minus
Query 2519 AATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAAT 2578
|||| || || ||| |||||||||| ||| | || || || ||||| ||||||||||
Sbjct 449 AATATCCTATTATCTCTATCGAAGACGGTCTTGATGAGTCTGATTGGGATGGTTGGAAAT 390
Query 2579 CTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTA 2638
| | ||||| | |||||| ||||||||| ||||||||||| || || || || || |
Sbjct 389 ATTTGACTGAGCAGATTGGTGATAAAGTTCAGTTGGTTGGTGATGATTTATTTGTGACCA 330
Query 2639 ACACTGCTTACCTTGAAAAAGG-TATTGCAGAACACGCTGCTAACTCAATCCTTATCAAA 2697
| ||||| | |||| || ||| ||||| | || ||| || |||| | || ||
Sbjct 329 ATCCTGCT-ATCTTGCAAGAGGGTATTGATAAGCATATTGCCAATGCAATTTTGATTAAG 271
Query 2698 GTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCT 2757
||||||||||||||||||| | ||||| | || || ||| | | ||||| || |
Sbjct 270 TTTAACCAAATCGGTACTTTATCAGAAACGCTAGATGCGATCTATCTAGCGAAGAAAAAT 211
Query 2758 GGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGAT 2817
|| || || | | | ||||| |||||||||||||||||||| || || || |||
Sbjct 210 GGCTATGCAACGATTATCTCACATCGTTCAGGTGAAACTGAAGACAGCACCATTGCAGAT 151
Query 2818 ATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGT 2877
| || |||| ||| |||||||| ||||| || || ||| | | || | ||||||
Sbjct 150 TTAGCGGTTGGTACTGCTGCTGGTCAGATTAAAACTGGCTCACTATGCCGCTCAGACCGT 91
Query 2878 ATTGCTAAATACAACCAATTGCTTCGTATCGA 2909
|||| |||||||| || |||| ||||||||
Sbjct 90 GTTGCAAAATACAATCAGCTGCTACGTATCGA 59
>seq522123
Length=387
Score = 147 bits (162), Expect = 7e-31
Identities = 220/307 (72%), Gaps = 4/307 (1%)
Strand=Plus/Minus
Query 2608 CAATTGGTTGGTGACGACTTCTTCGTAACTAACACTGCTTACCTTGAAAAAGGTATTGCA 2667
|||||||| ||||| || || |||||||| || ||| ||| | ||||| | |
Sbjct 373 CAATTGGTCGGTGATGATTTATTCGTAACCAATACTAAAATTCTTAAGCGTGGTATCG-A 315
Query 2668 GAACACGCT-GCTAACTCAATCCTTATCAAAGTT-AACCAAATCGGTACTTTGACTGAAA 2725
|| | |||||||| || | || || || |||||||||||||| || || ||||
Sbjct 314 CAATGGTATCGCTAACTCTATTTTGATTTAAATTCAACCAAATCGGTACCTTAACCGAAA 255
Query 2726 CTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTT 2785
|||| | || || ||||||| ||||| || || | || | || | || ||||||
Sbjct 254 CTTTGGCTGCAATTAAAATGGCCAAAGATGCAGGTTTTACTGTTGTTATTTCTCACCGTA 195
Query 2786 CAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAA 2845
|| || || ||||||||||| || |||||| | || |||| || || |||||||
Sbjct 194 GTGGCGAGACAGAAGATTCAACGATTGCTGATTTAGCTGTTGGTACAGCGGCAGGTCAAA 135
Query 2846 TTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTA 2905
| || || |||||| | ||| |||||||| ||||||| |||||||||||||| ||||
Sbjct 134 TCAA-ACCGGTTCACTAAGCCGTTCTGACCGTGTTGCTAAGTACAACCAATTGCTACGTA 76
Query 2906 TCGAAGA 2912
| |||||
Sbjct 75 TAGAAGA 69
>seq507726
Length=429
Score = 113 bits (124), Expect = 1e-20
Identities = 162/226 (72%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 2521 TACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATCT 2580
|| || |||||| | ||||||||||| ||||||| |||||||| || ||||||
Sbjct 225 TATCCGATCATCTCCATCGAAGATGGCCTGGACGAGTCTGACTGGGATGGCTGGAAAATC 166
Query 2581 CTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAAC 2640
|| || || | |||| |||||||| |||| ||||||||| | |||||||| |||
Sbjct 165 CTGACCGATAAAATCGGTGAGAAAGTTCAGCTGGTAGGTGACGACCTGTTCGTAACCAAC 106
Query 2641 ACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCT-GCTAACTCAATCCTTATCAAAGT 2699
|| ||| || |||| || | | || | | | || ||||| ||||| ||||| |
Sbjct 105 ACCAAGATCCTGAAAGAAGGCATCG-ATAAAAAGATCGCCAACTCGATCCTGATCAAGTT 47
Query 2700 TAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATG 2745
||||| |||||||| |||| ||||| | || |||||| | |||
Sbjct 46 CAACCAGATCGGTACCCTGACCGAAACACTGGAAGCTATCCAGATG 1
>seq505753
Length=545
Score = 96.9 bits (106), Expect = 1e-15
Identities = 103/135 (76%), Gaps = 1/135 (1%)
Strand=Plus/Minus
Query 2776 TCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCA-ACTAA 2834
||||| ||||||||||| ||||||||| || || |||||| | || |||| | ||
Sbjct 529 TCACATCGTTCAGGTGAGACTGAAGATAGTACCATTGCTGATTTAGCCGTTGGATTCTGC 470
Query 2835 CGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCA 2894
|||||||| |||||||| ||||| | | ||| | |||||| | || |||||||| ||
Sbjct 469 TGCTGGTCAGATTAAGACTGGTTCTCTATGTCGTTCAGACCGTGTGGCAAAATACAATCA 410
Query 2895 ATTGCTTCGTATCGA 2909
|||| ||||||||
Sbjct 409 GCTGCTACGTATCGA 395
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155064667916088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |