Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq16550 89.7 2e-12 >seq16550 Length=9108 Score = 89.7 bits (98), Expect = 2e-12 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| | ||| || |||||| || || ||| || | || ||||| | || |||||| Sbjct 3281 CTCGATGAGCATCCCGATGGTCATACGGGAGGGGAAGCCGTGGGGGTTGAAGAGGATGTC 3340 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 ||| ||| |||| | | |||||||||||||||| || | ||| ||||| | | Sbjct 3341 GGGAGTCATGCCGCTCTCTGTGAAGGGCATGTCCTC--AGTCGGCCA-CAGGCGGCTCAG 3397 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || ||||||||| |||||||| ||| ||||||||||| Sbjct 3398 GATGCCCTTCTGCCCGTGGCGACTGGCAAACTTGTCCCC 3436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2070705841147476