Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq509954 163 4e-35 >seq509954 Length=433 Score = 163 bits (180), Expect = 4e-35 Identities = 210/290 (72%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 140929 CATGGTCTCGATGCAGAGCAAGAACTTGCTAACATCCTGTCCAGCGAAGTTCTCGCAGAA 140988 ||||| | || ||||| |||||||||| || || || || | ||| |||| |||||| Sbjct 24 CATGGCTTGGACGCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAA 83 Query 140989 ATCAACCGTGAAGTCGTTCGTACCGTCTACACCGTTGCAAAGAAAGGTGCTCAAAACAAC 141048 || |||||||| | |||||||||| || | |||||| ||||| |||| Sbjct 84 ATTAACCGTGAGCTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACAAACTGGT 143 Query 141049 GTAGCAACCCCTGGCGTATTTGACCTCGACGTTGACTCCAACGGTCGCTGGTCTGTTGAG 141108 ||||| | |||| | || || | ||||| || | || ||||||||||| || || Sbjct 144 TCAGCAAACGCTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAA 203 Query 141109 AAATTCAAGGGTCTCCTCTTCCAAATCGAGCGTGATGCTAACGCAATCGCACAAGAGACT 141168 |||||||| || || | |||||||| || |||||||||||| |||||| |||| || Sbjct 204 AAATTCAAAGGACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACC 263 Query 141169 CGTAGAGGAAAGGGCAACTTCCTGATCTGTTCAGCTGACGTTGCTTCTGC 141218 | | || || || ||||| | ||||||||| ||||||| |||||||| Sbjct 264 AGACGTGGTAAAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGC 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629914871148000