Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031908.1 Length=42685 Score E Sequences producing significant alignments: (Bits) Value seq264036 352 8e-93 >seq264036 Length=1174 Score = 352 bits (390), Expect = 8e-93 Identities = 735/1076 (68%), Gaps = 34/1076 (3%) Strand=Plus/Minus Query 13272 TTACTTGCGTTGCCATTGTTTAGCTTCCTCTAGTAGTTTAATGAAATTGC-GCGCTGGTT 13330 |||||| ||| |||||| || ||||| || || | | | ||| ||| | | | || Sbjct 1067 TTACTTACGTGGCCATTTCTTCGCTTCTTCCAGCAAAG-ACTTAAACTGCTGAACCGCTT 1009 Query 13331 TGCTACGCATATGCTTTTTATTCTCAACTAAGAATTCTTCTAGCTTTTTGAACGGTGTGC 13390 | || | |||||| || || ||| ||| | ||||||||||| ||| | || || | Sbjct 1008 TACTTCTCATATGGCGCTTGTTATCACCTAGATACTCTTCTAGCTTCTTGTAAGGCGTTC 949 Query 13391 CAGGCTCTTCCCACTTGTTAGCTACATGAGCGTAACCTGACATGGTCATTACAGAGTACA 13450 || || ||||||||||| || |||||||| || |||||| | ||||| ||| | Sbjct 948 CATCTTCCTCCCACTTGTTTGCCACATGAGCATATCCTGACTTAGTCATAGTGCTGTATA 889 Query 13451 ATCCACCACCTACAGCCATACCGTAACCTAATGATGAACCCATTTGCTTAATCTCGACAT 13510 || |||||||| | |||||| |||||||| | ||||||||| |||||||| || |||| Sbjct 888 GGCCTCCACCTACTGACATACCATAACCTAAAGTTGAACCCATCTGCTTAATTTCTACAT 829 Query 13511 GACCAAAGCGCGCTACAAATGCCTGTGTAATTAGTTTAGCAACATCTTTACTTATATGCC 13570 |||| || || || || || || || | |||||| |||||||||| || Sbjct 828 GACCGAATCGAGCAGTGAAAGCTGAGGTTATCATTTTAGCGCATTCTTTACTTACGTGAT 769 Query 13571 AGTTGTAGCTGCTAACGTCTTGCTTATTTTCAGTCAGCATGTTCAGCACTTGTTGGGCTC 13630 | | | ||| |||||| ||| |||||| ||||| || || | | ||| Sbjct 768 GATCGAAAGAGCTTACGTCTCTCTTCCCTTCAGTAAGCATATTTAGTATCAAGTCTGCTT 709 Query 13631 TACCCGTAGTATTCTTAGCCCAATACTTACTAGTTTCCCAGGACAGACCATGTACA--TC 13688 |||| | ||| | |||||| ||||||||||||||||| || || || ||||| || Sbjct 708 TACCTGCTACATTATCAGCCCAGTACTTACTAGTTTCCCAAGAAAGTCC--GTACAAGTC 651 Query 13689 TGCTAATTGGCGGTCACTGCCCATTTTAACTACTGAAGGACAGAAGTCGTAACCGTACTT 13748 ||| | || | ||||| |||||||| ||||| |||||||| || | ||||||||||| Sbjct 650 TGCAAGCTGCCTATCACTACCCATTTTTACTACAGAAGGACAAAAATTATAACCGTACTT 591 Query 13749 AAAGCCGTCATCTTCACACACGTAAAGGCCACCGACAAATATTTGACCTGGGCGGTCTGG 13808 |||||| | ||| | ||| | || || || ||||| | ||| || || | || Sbjct 590 AAAGCCAGAACTTTCGGATACGAATAGACCGCCAACAAAAACTTGTCCGGGTCTATCAAT 531 Query 13809 TATTAGATTAACATCGCCAAATTCTACAGGTGGTAAAGGGTCGTTAGCTAGTATAGGGAG 13868 | || ||||| | ||| || || |||| ||| | || |||||||||| | Sbjct 530 CACAAGGTTAACTTTACCATTTTTAACTTCAGGTAGAGGATTATTGTCTAGTATAGGCAT 471 Query 13869 CTTGTACTTAAGTTCACCAATCTCTTCACTTGTTAGGTTGTTTATGATGAATGTAGTGTC 13928 ||| || |||||||| || ||| || || || ||||||||||||||||| Sbjct 470 ACGGTATTTTAGTTCACCGATTTCTCCATCATCTAAATTACTTATGATGAATGTAGTGCA 411 Query 13929 TTGTACATTAGTGTAAT--TG-CGTTCA-CAA------CTAC--CAACCTTA--GTGAAA 13974 | || | |||||| || | | || | | || | | | || ||| Sbjct 410 GTTATCACCATTGTAATAATGACCTGCAGCTATTGTTTCTTCTGCGCCTGTAACGTG--- 354 Query 13975 TTTAGGCA---GAAA-GTATCTACGCCTATAGCATTAGGCTCAAAGTCTGGTTCAATGTG 14030 ||||| | |||| |||||||| |||| | || ||||| | | | || | Sbjct 353 TTTAGTTAAGTGAAATGTATCTACACCTACATCACACACTTCAAATGACGCTACGATATA 294 Query 14031 GTCTTCACCTGAGTATAGTTCAGGCTCGTTACCTTCACGTGTTAGTACTAACATAGCCAG 14090 ||| ||||||||||| | ||||| ||||||||||| ||| || | |||||| || Sbjct 293 ATCTGAACCTGAGTATATCACTGGCTCTTTACCTTCACGCTCTAGAACCATCATAGCAAG 234 Query 14091 TTTAAAGCCTTCGCCAAAACCTCCACGGCTGTGAGAGTTTTCTTTTTGTGACTCACCTAA 14150 ||||| ||||| |||||||| ||||||||||| ||||| ||||| || || ||||| | Sbjct 233 CTTAAACCCTTCACCAAAACCACCACGGCTGTGTGAGTTCTCTTTCTGCGATTCACCAAG 174 Query 14151 GGCAAACACTTCACTAGG--AAGTACATAGCCGTAGGTAGTCACTTTCAAG-CTGTTATC 14207 || |||||||| || |||| |||||| || ||||| | || | || || || Sbjct 173 TGCGAACACTTCTTGTGGTAAAGT--ATAGCCATAAGTAGTTA-TTACTAGAGACTTCTC 117 Query 14208 CGGGCGGAATTCAAAAGTGCTTTTGCAGTGCGAATTGTCCATACAGTTTTGAACTAACTC 14267 ||| || ||||| ||||| || | |||||||||||||| ||||| || | ||| Sbjct 116 TTTAGTGAACTCGAAAGTACTTTTACATAGAGAATTGTCCATACAATTTTGTACAAGCTC 57 Query 14268 ACGAATTGCATCAACCACT-CCCCATTCTTTACGGTAGCTCGCTGTCATCATGTAA 14322 ||| | ||||| || ||| ||||||||||| ||| || | |||||||||||| Sbjct 56 ACGTACCGCATCTACTACTCCCCCATTCTTTGCGGAAGTTTTTAGTCATCATGTAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135618778815828