Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031917.1
Length=39949
Score E
Sequences producing significant alignments: (Bits) Value
seq260826 336 6e-88
seq521789 279 1e-70
seq505459 230 6e-56
seq425690 199 1e-46
seq518294 167 6e-37
seq518758 136 1e-27
seq512719 123 6e-24
seq347572 107 5e-19
seq425038 95.1 3e-15
>seq260826
Length=726
Score = 336 bits (372), Expect = 6e-88
Identities = 379/518 (73%), Gaps = 0/518 (0%)
Strand=Plus/Plus
Query 24153 ATTACTGTTTTTGCATCTTGCTCACTGATTCCATTTTCAGCCAGTGCGGCAAGTATTGAG 24212
|| || || |||||||| | || || || ||||||||| |||||| |||||||||||
Sbjct 208 ATAACGGTCTTTGCATCATCTTCGCTAATGCCATTTTCAACCAGTGTGGCAAGTATTGCA 267
Query 24213 TTGTTAACCTTCTTTTTGTGCTCGGTATCAGCTTCGCGCTTTAACCTTTCGTTTTCTTCC 24272
|||||||| || |||||| | |||||||| || ||||||| ||| |||| |||||
Sbjct 268 TTGTTAACTCTCGCCTTGTGCGCTGTATCAGCCTCACGCTTTAGCCTGTCGTGCTCTTCA 327
Query 24273 CTCTGTAGTTGCGCTTGTCGTGCATTCTCAGCGTTTATTAGCGCCTGCTCAGCTGCTTGT 24332
| ||||| || |||||||||||||||||||| | |||| ||| |||| || |||||
Sbjct 328 CGCTGTAACTGTGCTTGTCGTGCATTCTCAGCATCAATTAACGCTTGCTTTGCCGCTTGC 387
Query 24333 TCGGCTATTTGCTTTTCCCGCTCTGCTTGCTGCTGGCGCTCAATCTCACNNNNNNNNNNN 24392
||||||||||||||||| ||||||||||||||||||||||| | |||
Sbjct 388 TCGGCTATTTGCTTTTCGCGCTCTGCTTGCTGCTGGCGCTCTTTTTCAGCATTAGCTTCG 447
Query 24393 NNNTCCACCTTTTCCAAATCCCATAGGCGATTTAATTGTAAAGCTTCTTCGTGGTCGCGC 24452
|| | | || | ||||| || ||| | ||| || ||||||||||| || ||
Sbjct 448 CGCTCTAATTGCTCGTATTCCCAAAGTTTATTAAGTTGCAACGCTTCTTCGTGATCACGT 507
Query 24453 TCTATTTGTTCGGCTAAATCCTTTTCAGCTTGAATGCGCTTTTCNNNNNNNNNNNNNNNN 24512
|| |||||| | || || |||||||||| | |||||||||
Sbjct 508 TCAATTTGTGCCTGTAGCTCTATTTCAGCTTGTAGGCGCTTTTCTTCATCGAGTACACGC 567
Query 24513 NNGCGCTCAGCATTCCATTCATCAATCAAGGCTGTAAACGGGCTATTTGCCTTTTCAAGT 24572
|||||| ||||||| || ||||| || |||||||| | ||||| |||||||||
Sbjct 568 TTGCGCTCTACATTCCACTCGTCAATTAAAAGCGTAAACGGCTTGTTTGCGTTTTCAAGT 627
Query 24573 CGGAGCTTAATTTCTTTAGCCTCCGCCTCGACTTGCGATTTATATTGCTTTGATAAATCA 24632
|| |||||||||||||||| || | || || |||| ||||||||||||||||| ||
Sbjct 628 CGATGCTTAATTTCTTTAGCTTCTGATTCAACCTGCGCTTTATATTGCTTTGATAGGTCG 687
Query 24633 ATGCGCTTACGATCTAGCTTTTTCAGTAGGTCATTCAC 24670
|| ||||| || ||||||||||| |||| ||| || ||
Sbjct 688 ATACGCTTGCGGTCTAGCTTTTTAAGTAAGTCGTTAAC 725
>seq521789
Length=232
Score = 279 bits (308), Expect = 1e-70
Identities = 201/232 (87%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 32953 GACTTAATCAATGAGTCTAGTTAAATCAATTAAATTTATAGGCACAAACACTCAAGTAGT 33012
|||||||| ||||||||||||||||||||||||||| |||||||| ||||| ||||||||
Sbjct 232 GACTTAATTAATGAGTCTAGTTAAATCAATTAAATTCATAGGCACTAACACGCAAGTAGT 173
Query 33013 TATCCAGCTAATGCAAGAGTTATTTAAGCACAGCGGACAGCTTAAAGTAACCATTGAGCC 33072
|||||||||||||||||| |||| || || ||||||||||||||||| || | |||||
Sbjct 172 CATCCAGCTAATGCAAGAGCTATTCAATCATAGCGGACAGCTTAAAGTGACTGTCGAGCC 113
Query 33073 TTGGAGTGAAAAACGCACCATTAGCGCTAACGCTCAAATTCATGTTTGGTATGCTCAAAT 33132
||| | || || ||||| |||||||| || ||||||||||| ||||||||||| || |
Sbjct 112 CTGGTGCGATAAGCGCACAATTAGCGCCAATGCTCAAATTCACGTTTGGTATGCACAGGT 53
Query 33133 AGCAAAGCAGGATGGGGAGAATGTTTTGAATGTTGAGAACCAGTGCAAGCGT 33184
||||||||| || || ||||||||||| | ||||||||| ||||||||||||
Sbjct 52 AGCAAAGCAAGACGGTGAGAATGTTTTAACTGTTGAGAATCAGTGCAAGCGT 1
>seq505459
Length=584
Score = 230 bits (254), Expect = 6e-56
Identities = 409/590 (69%), Gaps = 10/590 (2%)
Strand=Plus/Plus
Query 38113 GCTCCTGTAGAATCAAATACCAGTATTAAGGTTGAGCAATCACTT--GCTGAAAAGCTTA 38170
|| ||||||||| | |||| || ||| || || | ||| ||| ||||| | ||| |
Sbjct 1 GCACCTGTAGAAACGAATAACAATATCAAAGT--ATCAACTGCTTTAGCTGACAGGCTAA 58
Query 38171 CTGGTGGGTCTAAGCGATAATGACCAATCATGAGCAAGCCAAGTGGTATTTAGATAACCT 38230
|||| || ||||| || | ||| ||||| |||||||| ||||||||||| ||||| ||
Sbjct 59 CTGGCGGATCTAAACGGT---GACAAATCACGAGCAAGCTAAGTGGTATTTGGATAATCT 115
Query 38231 AGATGAGATTGACTATGAGCAGCTAGCCGATGCACTAACCTATAAGTGGTTTAGGCTAAA 38290
||| | |||| ||||| || ||||||| || | || || |||| || || | ||
Sbjct 116 AGAGTCGCTTGATTATGACCAAATAGCCGACGCTATGACATACAAGTTTTTCAGAATGAA 175
Query 38291 CACCCTTTACCACATCAAAAACAAGCAAGGCAAGAAGGTCTTATTTACTCCCAATGAGGA 38350
|||| ||||||||||||| | |||| ||| | ||||| | || | || | |||
Sbjct 176 CACCTTTTACCACATCAAGGATAAGCTAGGGCAAAAGGTTCTTTTCAAGATGAACGCGGA 235
Query 38351 ACAAGAAGATTTTTACGTTAACATGCACGGTCGCGATATTATATTGAAGGCTAGGCAATT 38410
|| | || || ||| ||||| |||| | | || || || || || || ||||| |
Sbjct 236 GCAGGTTGACTTCTACCTTAACCAGCACAATAGGGACATAATTTTAAAAGCCAGGCAGCT 295
Query 38411 AGGTTTTACCACCTTTAAAATGATACATGATCTTGATGATTGCTTGTTCATCGCC-GACT 38469
||| || || ||| | |||||| || ||| | ||||||||| |||| | |||| |||
Sbjct 296 AGGGTTCACGACCCTGAAAATGTTAATGGATTTAGATGATTGCCTGTTTA-CGCCTAACT 354
Query 38470 TCAACGCTGGTTGTATTTGTCATAACTT-AGATGCGGCTAAGGATATATTCAGAAACAAG 38528
| ||| ||||||||||| |||| | || | || ||||| | | ||| || ||
Sbjct 355 ACTCGTGTGGCTGTATTTGTCACGACTTAAAATTCAGCAAAGGACGTGTACAGGAATAAA 414
Query 38529 ATTAAGTTTGCTTACCAGAATATAAAGCCCGAACAAATAGAATTGCTATCCGAGATGGGC 38588
|| ||||| || | |||||| || || |||||||| | || || | |||
Sbjct 415 ATACGCTTTGCATATCGAAATATAGCACCTGAGCAAATAGAGATTTTAAGTGATGTTGGC 474
Query 38589 TACAAGCTACCAAAGCCTAAAAGCGATAAGGGTAACGCTTACGTATTTGATAACGGCTCA 38648
||||| || || || | || ||| || | ||||| ||||| || ||||||||||||
Sbjct 475 TACAAACTCCCTGCACCAATAAACGACAAAGATAACGGCTACGTGTTCGATAACGGCTCA 534
Query 38649 GCAATTAAGGTTTCAACATCATATCGTGGTGATACCCTGCAATCATTGCA 38698
|||| |||| |||||||||||||| | || || ||| |||||
Sbjct 535 TCAATAGCGGTTAGCACATCATATCGTGGCGGCACTCTACAAAGCTTGCA 584
>seq425690
Length=473
Score = 199 bits (220), Expect = 1e-46
Identities = 215/284 (76%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 38556 CCCGAACAAATAGAATTGCTATCCGAGATGGGCTACAAGCTACCAAAGCCTAAAAGCGAT 38615
|| || |||||||| | || ||| | |||||||| || ||| || | || ||||
Sbjct 7 CCTGAGCAAATAGAGATCTTAAGCGATGTTGGCTACAAACTCCCATCACCAATAAACGAT 66
Query 38616 AAGGGTAACGCTTACGTATTTGATAACGGCTCAGCAATTAAGGTTTCAACATCATATCGT 38675
|| | ||||| ||||| || |||||||||||| |||| |||| ||||||||||||
Sbjct 67 AAAGATAACGGCTACGTGTTCGATAACGGCTCATCAATAGCGGTTAGTACATCATATCGT 126
Query 38676 GGTGATACCCTGCAATCATTGCACGTTTCTGAGTTTGGCAAGATATGTAAAAAGTATCCC 38735
|| | || || ||| ||||| | ||||||||||| ||||||||||||||||| ||
Sbjct 127 GGCGGCACTCTACAAAGCTTGCATATATCTGAGTTTGGTAAGATATGTAAAAAGTACCCT 186
Query 38736 GATAAAGCAAAAGAGATTGTTACTGGTGCATTTGAAGCTGTACCCGCTGATGGTGGTGTA 38795
|| ||||| ||||||||||| || ||||| ||||||||||| || | ||| ||||
Sbjct 187 GAGAAAGCCAAAGAGATTGTAACCGGTGCGTTTGAAGCTGT---GGCGGTTGGCAATGTA 243
Query 38796 ATTACCCTTGAGTCTACCGCGGAGGGTAAAGAGGGTTATTTCTA 38839
|| || | ||||| || || ||||||||||| ||||| |||||
Sbjct 244 ATCACAATAGAGTCAACGGCAGAGGGTAAAGAAGGTTACTTCTA 287
>seq518294
Length=326
Score = 167 bits (184), Expect = 6e-37
Identities = 156/195 (80%), Gaps = 9/195 (5%)
Strand=Plus/Plus
Query 24842 TTTTTATTTGATCTGCAACTTGGTTAGATACAGCATAACCATTTGCTTTTAATTCACTGA 24901
|| |||||||||| ||||| |||||||| || | | ||||| || |||||||| | |
Sbjct 1 TTCTTATTTGATCGGCAACCTGGTTAGACACTGTAAAACCACCCGCCTTTAATTCGCCAA 60
Query 24902 TAATCATATCAGCTGTTTTTGCACCGCTTTGAATATCAACCAGCATGTACTGCTTGTCAT 24961
|||||||||| || ||||| ||||||||||||||||| ||||||||||||||||| |||
Sbjct 61 TAATCATATCCGCAGTTTTAGCACCGCTTTGAATATCTACCAGCATGTACTGCTTATCAG 120
Query 24962 TTTCAAAAGTGTTGTACCAATTCACATT------TTGTTGCTGACTTGGCTTGGCGC-TC 25014
|| |||| |||||||||||||||||| ||| | ||| ||| || |||||| |
Sbjct 121 CCTCGAAAGAGTTGTACCAATTCACATTACTAGCTTGCTTCTG-CTTTGC-TGGCGCTTT 178
Query 25015 TTGGCTGGCTGATTT 25029
|||||| ||||| ||
Sbjct 179 TTGGCTAGCTGAATT 193
>seq518758
Length=382
Score = 136 bits (150), Expect = 1e-27
Identities = 263/384 (68%), Gaps = 7/384 (2%)
Strand=Plus/Plus
Query 38190 ATGACCAATCATGAGCAAGCCAAGTGGTATTTAGATAACCTAGATGAGATTGACTATGAG 38249
|||| ||||| || ||||| |||||||| ||||| | || | ||||||||
Sbjct 2 ATGAATAATCACGATCAAGCGTGTTGGTATTTGGATAATTTGGAATCATTAGACTATGAC 61
Query 38250 CAGCTAGCCGATGCACTAACCTATAAGTGGTTTAGGCTAAACACCCTTTACCACATCAAA 38309
|| | |||||||| | || || |||| || || | || ||| | ||||| |||||
Sbjct 62 CAAGTTGCCGATGCCATGACATACAAGTTTTTCAGAATGAATACCTTCTACCATATCAAG 121
Query 38310 AACAAGCAAGGCAAGAAGGTCTTATTTACTCCCAATGAGGAACAAGAAGATTTTTACGTT 38369
| |||| ||| | ||||| | || | || | ||| || | ||||| ||| ||
Sbjct 122 GATAAGCTAGGGCAAAAGGTTCTTTTCAAGATGAACGCGGAGCAGGTTGATTTCTACCTT 181
Query 38370 AACATGCACGGTCGCGATATTATATTGAAGGCTAGGCAATTAGGTTTTACCACCTTTAAA 38429
||| |||| | | || || || || ||||||||||| ||||| || || ||| | |||
Sbjct 182 AACCAGCACAATAGAGACATAATTTTAAAGGCTAGGCAGTTAGGGTTCACGACCCTGAAA 241
Query 38430 ATGATACATGATCTTGATGATTGCTTGTTCATCGCCGACTTCAACGC---TGGTTGTATT 38486
||| || ||| | ||||||||| |||| | |||| | | || | ||| ||||||
Sbjct 242 ATGCTAATGGATTTAGATGATTGCCTGTTTA-CGCCTA--ACCACTCGTGTGGCTGTATT 298
Query 38487 TGTCATAACTTAGATGCGGCTAAGGATATATTCA-GAAACAAGATTAAGTTTGCTTACCA 38545
||||| ||||| || | || || || ||| || ||||||| || ||||| || |
Sbjct 299 TGTCACGACTTAAATTCAGCAAAAGACGTATACAGGAAACAAAATACGCTTTGCATATCG 358
Query 38546 GAATATAAAGCCCGAACAAATAGA 38569
|||||| || || ||||||||
Sbjct 359 AAATATAGCACCTGAGCAAATAGA 382
>seq512719
Length=379
Score = 123 bits (136), Expect = 6e-24
Identities = 121/156 (78%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 38613 GATAAGGGTAACGCTTACGTATTTGATAACGGCTCAGCAATTAAGGTTTCAACATCATAT 38672
|||||| || | ||| || ||| ||| |||||| ||||| || ||||| |||
Sbjct 244 GATAAGTCGAATGGTTATGTGTTTACTAATGGCTCATCAATTGGCGTGTCAACTGGTTAT 185
Query 38673 CGTGGTGATACCCTGCAATCATTGCACGTTTCTGAGTTTGGCAAGATATGTAAAAAGTAT 38732
||||||| || ||||||||| |||| |||| |||||||| ||||||||||||||||||
Sbjct 184 CGTGGTGGCACACTGCAATCACTGCATATTTCAGAGTTTGGTAAGATATGTAAAAAGTAT 125
Query 38733 CCCGATAAAGCAAAAGAGATTGTTACTGGTGCATTT 38768
|| || || || || |||||||| || ||||| |||
Sbjct 124 CCAGAAAAGGCCAAGGAGATTGTGACGGGTGCTTTT 89
>seq347572
Length=720
Score = 107 bits (118), Expect = 5e-19
Identities = 204/298 (68%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 18108 CAGCAACCGTTAACACTTAGTGATAGTGGCAATATAAAGCAAGGCTCTATAA-CTGTAGA 18166
|||||||| ||||| || | || | |||||||||||| || ||| | ||
Sbjct 470 CAGCAACCTGTAACAATTGATTTCAGCGAGGATATAAAGCAAGAGTCGTTAAGCATTAAG 411
Query 18167 CAACAATTACAGCGAGCAAGTAACACGCGCGTCAATTGGCTTTGCGCCTTTCAATGCTGG 18226
| | | ||||| | |||| || || || |||| || || || || | | || |
Sbjct 410 CCAGA-TTACAAAGGGCAAAAGACGCGAGCAACAATAGGTTTCGCACCATATGACGCAGC 352
Query 18227 TAAAAAGGTTGATGATGAAAATGCATCGATTATTTACAAGGGCATTGATTTAATAACTGA 18286
|||||| |||||||||||||| | || ||||||| | || || |||| |||||
Sbjct 351 TAAAAAAGTTGATGATGAAAACTCGTCAATTATTTTTCAATCAATAAATATAATTACTGA 292
Query 18287 AACCACTGGCACACTTGAGCCGCTTGAAGATGATGAGTTTTATTCTAGGTTTCTGACAAA 18346
| || |||||||||||||| | ||||||| || ||||| | |||| | || ||
Sbjct 291 GGCGACCGGCACACTTGAGCCACAAGAAGATGCGGAATTTTACACGCAGTTTTTAACCAA 232
Query 18347 TAGTGATACGGACATACAAATTGCCGTTGCTGGTACGAATAGGATTTCTCAATTAAAC 18404
||| ||||| || |||||||| || || | ||| || |||| || || | ||||||
Sbjct 231 TAGCGATACTGATATACAAATCGCGGTAGGTGGCACAGCTAGGGTTGCTAACTTAAAC 174
>seq425038
Length=775
Score = 95.1 bits (104), Expect = 3e-15
Identities = 294/454 (65%), Gaps = 1/454 (0%)
Strand=Plus/Plus
Query 13688 GCTGTTGCGACTGCGCTGGCGACTGCTCAAATAATTAAATACGCCGATTCGTGGACTACG 13747
||||||| | || ||||| || ||||| || || ||||| || | |||| ||
Sbjct 321 GCTGTTGGCGCAGCACTGGCCACAGCTCAGATTCAAAAGTACGCTGACGCATGGATTAAC 380
Query 13748 GTGAATAACCGACTAA-GCCAAGCTACCAGCTCAGCAAGTGAGTTTATTAATGCTCAAAA 13806
|| || || || ||| || || || || || ||||||| | || || |
Sbjct 381 GTTAACAATAGATTAAAGCGCGGCAACAAGTGGTGCGCTTGAGTTTCAGAGGGCGCAGCA 440
Query 13807 AGGCGTTATATCAATTGCCCAGTCATCTGCAACCGATATAGAAGGTGTCGCGTCTGCTTA 13866
|| || || ||||| ||||| | ||| ||||| ||||| || ||||||
Sbjct 441 GGGTGTCATTTCAATAGCCCAACAAGCTGGCGTTGATATTAGCGGTGTGGCTGATGCTTA 500
Query 13867 CTCAAGACTGGCACAGGCAACTGATGAGCTTGACTTGTCTCAAGAGCAATTATTAAACGT 13926
||| | | || || ||||| |||| | | | ||| |||| | ||| | ||
Sbjct 501 CTCTCGTATTGCTCAATCAACTTCTGAGTTGGGGATTAGTCAGGAGCGTATCTTAGATGT 560
Query 13927 TACTAGCAAGCTAACCCTAGCGCTAAAAGCTGGCGGGGCGACTGCTGACGAGACTAGTAG 13986
|| || || ||| || || |||| ||||| ||||| || | || || ||
Sbjct 561 GACCAGGAAAACAACGCTTGCATTAAAGGCTGGTGGGGCTACAGGATCTGAAACATCAAG 620
Query 13987 TGTTATGATCCAGTTAGCTCAGGGTTTAGGCTCTGGTGCGTTGCAGGGTGATGAGCTGCG 14046
|||||||| ||| | | || | | | || || ||||||||||||||||||||||| |
Sbjct 621 CGTTATGATTCAGCTTGGCCAAGCTCTTGGTTCAGGTGCGTTGCAGGGTGATGAGCTTAG 680
Query 14047 CTCAATACTTGAGGCGTCAATACCAATAAGTAAGGCGTTAGCTGCTGAATTTGGTGTTAA 14106
||||||||||| || || ||||| |||| ||||| |||| || ||| | ||
Sbjct 681 ATCAATACTTGAAGCATCTATACCTATAACGAAGGCTCTAGCAAAGGAGTTTAACGCTAC 740
Query 14107 CGTAGGTCAGTTAAAAACACTTGGCTCGCAAGGT 14140
|| ||| | |||||||| || ||| |||||
Sbjct 741 TACTGGGCAGCTTAAAACACTAGGGTCGGAAGGT 774
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126918214207764
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