Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014 -11-24] 525,502 sequences; 547,831,023 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq523693 129 2e-25 seq311730 98.7 3e-16 seq511443 96.9 1e-15 seq517135 84.2 6e-12 >seq523693 Length=695 Score = 129 bits (142), Expect = 2e-25 Identities = 217/310 (70%), Gaps = 7/310 (2%) Strand=Plus/Minus Query 33619 ACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTA-TCAGTCCATTTTCTAGTGCGCAA 33677 |||||||| || ||||| || || || || || || |||| || | || |||| Sbjct 369 ACAATTTCAGTTGTGTACTTGTCTTGGCC-GCTTTGGTCTTTCCACTTACGTGTCTGCAA 311 Query 33678 CTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAG 33737 | |||||||| |||||||| || ||||| | || |||||| | | |||||||| | Sbjct 310 TTTACCTTCAAGGTAAACTTGCGAACCTTTACGCAGGTACTCAGCCGTGATTTCAGCTAA 251 Query 33738 CTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCA-CCAGTAGCCT 33796 |||||| || || || ||||||||||| || || | || | || | | || || | Sbjct 250 CTTGCCGAACATCACCACGCGGTGCCACTCGGTACGTTCTTGTTGTTGACCCTGT----T 195 Query 33797 TATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCA 33856 || ||||| ||||| ||||||| | | ||||| || || ||||||||||| Sbjct 194 GGTCTTTCCAAGATTCGCTGGTAGCAAGGGTAATATTGGCCACGGCATTGCCATTTGGCA 135 Query 33857 TGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCCGC 33916 | || |||||||| || || |||||||| |||||| | || ||||| || || || | Sbjct 134 TATAACGCACTTCGGGATCTTGGCCTAAATTGCCGACTAATATGACTTTGTTAACACCAC 75 Query 33917 GAGTTGCCAT 33926 || | ||||| Sbjct 74 GACTGGCCAT 65 >seq311730 Length=9896 Score = 98.7 bits (108), Expect = 3e-16 Identities = 207/308 (67%), Gaps = 3/308 (1%) Strand=Plus/Plus Query 33619 ACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAAC 33678 |||||||| || ||||||||||| || ||||||||||| | || | | Sbjct 2712 ACAATTTCAGTCGTGTATTTTTCTTGGCCTTGTGGGTCAGTCCATTTACGTGTTTGAAGT 2771 Query 33679 TGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGC 33738 | |||||||| ||||| |||||| ||||| | ||| |||||| ||||||| || | | Sbjct 2772 TTACCTTCAACATAAATTTGTGAACCTTTACGGCAATATTCACCAACAATTTCTGCTAAC 2831 Query 33739 TTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTA 33798 |||||||| | || || |||||||| ||||||| || | | ||||| || Sbjct 2832 TTGCCAAAAAATACCACACGGTGCCACTCAGTTTTATCAACCATTTGGCCAGTGTTTTTG 2891 Query 33799 TCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATG 33858 || || | || || || || | | | || || ||| || ||| || ||||| Sbjct 2892 TCTTTGTAGCTATCTGAAGTTGCTAAGGTGATATTTGCTACACCGTTGCCGTTAGGCATA 2951 Query 33859 TATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCCGCGA 33918 || || ||||| || || || ||||| | || | | |||||||| || || ||||| Sbjct 2952 TAACGTACTTCAGGATCTTGTCCTAAATTACCAACCAAAATTACTTTGTTCACACCGCG- 3010 Query 33919 GTTGCCAT 33926 |||||| Sbjct 3011 --TGCCAT 3016 >seq511443 Length=1027 Score = 96.9 bits (106), Expect = 1e-15 Identities = 183/267 (69%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 33660 CCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTC 33719 ||| || || || |||| | ||||| ||||| |||| ||||||||| | | ||||| Sbjct 743 CCACTTACTGGTTTGCAATTTGCCTTCTAAATATACTTTAGAGCCTTTCTTTAAGTACTC 684 Query 33720 ACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTT 33779 |||||||||||| || || | | | ||||| | | |||||| || || | || | Sbjct 683 ACCAGCAATTTCCGCAAGACGACGATACATAACAATGTTGTGCCACTCGGTACGTTCTTG 624 Query 33780 TTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAAC 33839 | | ||| | | | || ||||| || || ||| || | || | ||||||||| Sbjct 623 CATTTGACC--TTGT-TGGTCTTTCCACGACTCACTTGTCGCTATAGTAAAGTTGGCAAC 567 Query 33840 AGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGAT 33899 ||| ||| ||||||||||| || || || || || | ||||| | |||| | || Sbjct 566 AGCATTGCCGTTTGGCATGTAACGAACCTCAGGATCTTTACCTAAGTTACCGACCAAAAT 507 Query 33900 TACTTTATTTACGCCGCGAGTTGCCAT 33926 |||||||| || || ||| | ||||| Sbjct 506 CACTTTATTCACACCACGACTAGCCAT 480 >seq517135 Length=240 Score = 84.2 bits (92), Expect = 6e-12 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 33682 CCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTG 33741 ||||||| ||| |||| ||| || || | | ||| ||||| ||||||||||| |||||| Sbjct 154 CCTTCAAGATATACTTTTGAACCCTTTTTTAAATATTCACCCGCAATTTCAGCAAGCTTG 213 Query 33742 CCAAAGATAACTACGCGGTGCCATTC 33767 ||||| ||||| || || |||||||| Sbjct 214 CCAAACATAACAACACGATGCCATTC 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144068120980896