Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudopleuronectes_20yokohamae_20[genbank_20GCA_5F000787555.1_202014
-11-24] 525,502 sequences; 547,831,023 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq509954 145 1e-29
seq127494 93.3 6e-14
>seq509954
Length=433
Score = 145 bits (160), Expect = 1e-29
Identities = 261/378 (69%), Gaps = 5/378 (1%)
Strand=Plus/Plus
Query 107893 GCAGAAGCTGAGCTAGCTAACATTCTCTCCTCTGAGATCCTAGCTGAAATCAACCGCGAA 107952
||||||| || || || || ||||| || |||| || || || ||||| ||||| ||
Sbjct 36 GCAGAAGAAGAACTTGCAAATATTCTTTCAACTGAAATTCTTGCAGAAATTAACCGTGAG 95
Query 107953 GTCATCCGTACAGTATACAAGACTGCTGTTCCTGGTGCTCAGGCTAACGTTGCTCAA--G 108010
| || ||||| ||||| ||||| |||||||| || || ||| ||| |
Sbjct 96 CTAATTCGTACCGTATATGCAACTGCAAAACCTGGTGCACAAACTG--GTTCAGCAAACG 153
Query 108011 CTGGCGTATTTGACCTTGACGTTGACTCCAACGGTCGCTGGTCTGTTGAGAAGTTCAAGG 108070
|||| | || || | ||||| || | || ||||||||||| || || || ||||| |
Sbjct 154 CTGGTATCTTCGATTTAGACGTAGATGCAAATGGTCGCTGGTCAGTAGAAAAATTCAAAG 213
Query 108071 GTCTTATCTTCCAAATGGAAAGAGACGCTAACGCAATCGCTCAGCAAACTCGTCGTGGGA 108130
| ||||| |||||||| ||| | || |||||| ||||||| | |||| | ||||| |
Sbjct 214 GACTTATGTTCCAAATTGAACGTGATGCTAACCAAATCGCTAAAGAAACCAGACGTGGTA 273
Query 108131 AGGGCAACATCATCATCTGTTCCGCAGATGTTGCTTCCGCTCTAACTATGGCTGGTGTGC 108190
| || ||| | || |||||||| | || || ||||| || | || ||||| | |
Sbjct 274 AAGGTAACTTTATTATCTGTTCATCTGACGTAGCTTCTGCATTGGCTGCTGCTGGAATCC 333
Query 108191 TTGATTACACCCCTGCTCTTAACGCCAACCT-TAACGTTGACGACACCGGCAACCTATTC 108249
|||||| | | |||||| | || || || || || || || ||||| || |||
Sbjct 334 TTGATTTCGCACCTGCTATCTCTGCAAATCTACAAAGTAGATGATACCGGTAATACATTT 393
Query 108250 GCTGGTACTCTACAAGGT 108267
|||||| |||| | |||
Sbjct 394 GCTGGTGTTCTAAACGGT 411
>seq127494
Length=1980
Score = 93.3 bits (102), Expect = 6e-14
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 142800 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGTCCGTTAT 142859
|||||||||||||||||||||||| ||||| |||||| ||||||||||||| ||||||
Sbjct 1611 TAGCTCAGTTGGTAGAGCGCCTGCCTTGCACGCAGGAGGTCAACGGTTCGACTCCGTTTG 1670
Query 142860 TCTCCACCA 142868
||||||||
Sbjct 1671 GCTCCACCA 1679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686917160093520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |