Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq301 116 7e-24 seq81 114 2e-23 >seq301 Length=612039 Score = 116 bits (128), Expect = 7e-24 Identities = 167/231 (72%), Gaps = 7/231 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC--TTTGCTCGAATACATTAGCATG 131 |||||||||||||||||||||| ||||||||||||| | || |||||| | | Sbjct 538292 TTTACTTTGAAAAAATTAGAGTTTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAACTAC 538233 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGG-TTTCT---AGGACCGCCGTAAT 187 ||||||| |||||| || | |||||||||||||| || ||||| | || | | | Sbjct 538232 GAATAATGGAATAGTAC-TCCGGTTCTATTTTGTGGGTTTTCTGTCTGAACTGGGGCCGT 538174 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||| ||||| |||||| | |||||| | |||||||||||||||||| Sbjct 538173 GATTAAGAGGGACGCCCGGGGGCATTCGTATTCTGCCGCTAGAGGTGAAATTCTTGGACC 538114 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298 ||||| || | | |||||| || |||| |||||||||||||| Sbjct 538113 GGCGCAAGACAGACGAAAGAGAAAGCATTTGTCAAGAATGTTTTCATTAAT 538063 >seq81 Length=2818084 Score = 114 bits (126), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || | | | | | |||||||||||||||||||||||| Sbjct 162205 ATGCTCTTAGCTGAGTGTCCCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 162146 Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | || |||||| ||| |||||||| ||||||||| | |||| Sbjct 162145 TCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 162087 Query 156 TCTATTTTGTTGGTTT 171 |||||||||| ||||| Sbjct 162086 TCTATTTTGTGGGTTT 162071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915133776128