Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pundamilia_20nyererei_20[refseq_20GCF_5F000239375.1_202011-12-22] 7,236 sequences; 830,133,247 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1948 194 3e-47 seq157 118 2e-24 seq620 75.2 2e-11 >seq1948 Length=7640 Score = 194 bits (214), Expect = 3e-47 Identities = 200/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 5723 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 5666 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||||||| | ||||| || | Sbjct 5665 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTGGATCAACGTGTGTCTAC 5606 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| ||||||| | | || | | ||||| | ||||| | | |||| Sbjct 5605 CCTTCGCCGAGAGGCGTGGGTAACCCGTTGAACCCCACTCGTGATAGGGATTGGGGATTG 5546 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | |||||||||| || |||||||||| ||||| ||| | |||||||| Sbjct 5545 CAATTATTTCCCATGAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCACGTTGATT 5486 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 5485 AAGTCCCTGCCCTTTGTA 5468 >seq157 Length=1503236 Score = 118 bits (130), Expect = 2e-24 Identities = 158/216 (73%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | | || ||||| |||||||||||||||| Sbjct 1285031 CTTCTTAGAGGGACAAGTGGCGTTTAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTG 1285088 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||| |||||| ||| ||||||| | || || | | Sbjct 1285089 ATGCCCTTAGATGTCCAGGGGTGCACGCACGCCACACTGAGTGGATCAGCGTATGTCTAC 1285148 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| | | ||||||| | | || | | ||||| ||||| | | |||| Sbjct 1285149 CCTTCGCCGAGATGCGTGGGTAACCCGTTGAACCCCACTCGTGACAGGGATTGGGGATTG 1285208 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286 |||||||| | | | |||||||||| || ||||||| Sbjct 1285209 CAATTATTACCCATGAACGAGGAATTCCCAGTAAGC 1285244 >seq620 Length=124810 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| || ||||||| || ||||| ||| ||||||||||| |||||||||||||||| Sbjct 77319 AGGAATTCCCAGTAAGCACGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 77377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947131460608