Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq93177 170 3e-40 seq164367 167 3e-39 seq201423 111 2e-22 seq102657 111 2e-22 seq92278 104 4e-20 seq149366 98.7 1e-18 seq265336 89.7 8e-16 seq179136 78.8 1e-12 seq99894 78.8 1e-12 seq266 75.2 2e-11 >seq93177 Length=399 Score = 170 bits (188), Expect = 3e-40 Identities = 171/218 (78%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| |||||||| ||||| |||||||||| |||||| | Sbjct 87 GTACAAAGGGCAGGGACTTAATCAATGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 144 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | | || ||||||||| | ||||| ||||||| |||| ||||| Sbjct 145 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCAATCACGAATGGGGTTCAGCAGATT 204 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||||||| ||| | || || ||| | || ||| |||||||||| Sbjct 205 ACCCGCGCCTGTCGGCGTAGGGTAGGAACACGCTGATCCAACCATTGTGGCGCGCGTGCA 264 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||||||||||| Sbjct 265 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 302 >seq164367 Length=300 Score = 167 bits (184), Expect = 3e-39 Identities = 170/218 (78%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| |||||||| ||||| |||||||||| |||||| | Sbjct 243 GTACAAAGGGCAGGGACTTAATCAATGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 186 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119 |||||| | | || ||||||||| | ||||| ||||||| |||| | ||| Sbjct 185 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCAATCACGAATGGGGTTCAGCGGATT 126 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||||||| ||| | || || ||| | || ||| |||||||||| Sbjct 125 ACCCGCGCCTGTCGGCGTAGGGTAGGAACACGCTGATCCAACCATTGTGGCGCGCGTGCA 66 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||||||||||| Sbjct 65 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 28 >seq201423 Length=269 Score = 111 bits (122), Expect = 2e-22 Identities = 130/173 (75%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 46 CTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG 105 |||||| |||||| ||||||| | | || ||||||||| | ||||| ||||||| Sbjct 1 CTTACTGGGAATT-CCTCGTTCATGGGAAATAATTGCAATCCCCAATCCCAATCACGAAT 59 Query 106 AAATTTCAAAG-ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAG 164 |||| | |||||||| ||||||||| ||| | || || ||| | || Sbjct 60 GGGGTTCAGCGGATTACCCGCGCCTGTCGGCGTAGGGTAGGAACACGCTGATCCAACCAT 119 Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 120 TGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 172 >seq102657 Length=397 Score = 111 bits (122), Expect = 2e-22 Identities = 130/173 (75%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 46 CTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG 105 |||||| |||||| ||||||| | | || ||||||||| | ||||| ||||||| Sbjct 1 CTTACTGGGAATT-CCTCGTTCATGGGAAATAATTGCAATCCCCAATCCCAATCACGAAT 59 Query 106 AAATTTCAAAG-ATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAG 164 |||| | |||||||| ||||||||| ||| | || || ||| | || Sbjct 60 GGGGTTCAGCGGATTACCCGCGCCTGTCGGCGTAGGGTAGGAACACGCTGATCCAACCAT 119 Query 165 TGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 120 TGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 172 >seq92278 Length=399 Score = 104 bits (114), Expect = 4e-20 Identities = 107/136 (79%), Gaps = 3/136 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| |||||||| ||||| |||||||||| |||| ||| Sbjct 258 GTACAAAGGGCAGGGACTTAATCAATGCGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 315 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119 |||||| | | || ||||||||| | ||||| |||||| ||| || |||| Sbjct 316 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCAATCACGAATGGGGTTCAGCGGATT 375 Query 120 ACCCGGACCTGTCGGC 135 ||||| ||||||||| Sbjct 376 ACCCGCGCCTGTCGGC 391 >seq149366 Length=318 Score = 98.7 bits (108), Expect = 1e-18 Identities = 85/103 (83%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| |||||||| ||||| |||||||||| |||| ||| Sbjct 113 GTACAAAGGGCAGGGACTTAATCAATGCGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 56 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA 103 |||||| | | || ||||||||| | ||||| ||||||| Sbjct 55 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCAATCACGA 13 >seq265336 Length=239 Score = 89.7 bits (98), Expect = 8e-16 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 116 GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||||||||| ||||||||| ||| | || || ||| | || ||| ||||||| Sbjct 239 GATTACCCGCGCCTGTCGGCGTAGGGTAGGAACACGCTGATCCAACCATTGTGGCGCGCG 180 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||| |||| | ||||||||||||||||||||||||||||||| Sbjct 179 TGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 138 >seq179136 Length=286 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 7 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 62 >seq99894 Length=399 Score = 78.8 bits (86), Expect = 1e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || ||| |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 7 CATTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 62 >seq266 Length=1123263 Score = 75.2 bits (82), Expect = 2e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 169 GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||| |||| | ||||||||||||||||||||||||||||||| Sbjct 523273 GCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 523225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749934571370