Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq84046 102 5e-20 seq112293 96.9 2e-18 seq37851 96.9 2e-18 seq92604 93.3 2e-17 seq91451 93.3 2e-17 seq4053 80.6 1e-13 seq51 71.6 8e-11 >seq84046 Length=399 Score = 102 bits (112), Expect = 5e-20 Identities = 94/118 (80%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||| || |||| || | | |||| |||| |||| ||||| |||| Sbjct 165 GAACCCAAAGACTCGTGGTTTCCCGCACGCTGCCCAGCGGGTCATGGGAATAACGCCGCC 224 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 225 GGATCGCGGGTCGGCATAGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 282 >seq112293 Length=379 Score = 96.9 bits (106), Expect = 2e-18 Identities = 93/118 (79%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||| || |||| || | | |||| ||| |||| ||||| |||| Sbjct 162 GAACCCAAAGACTCGTGGTTTCCCGCACGCTGCCCGGCGGGTCATGGGAATAACGCCGCC 221 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 222 GGATCGCGGGTCGGCATAGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 279 >seq37851 Length=624 Score = 96.9 bits (106), Expect = 2e-18 Identities = 93/118 (79%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||| || |||| || | | |||| ||| |||| ||||| |||| Sbjct 202 GAACCCAAAGACTCGTGGTTTCCCGCACGCTGCCCGGCGGGTCATGGGAATAACGCCGCC 261 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 262 GGATCGCGGGTCGGCATAGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 319 >seq92604 Length=399 Score = 93.3 bits (102), Expect = 2e-17 Identities = 92/118 (78%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||| || |||| || | | |||| || |||| ||||| |||| Sbjct 162 GAACCCAAAGACTCGTGGTTTCCCGCACGCTGCCCGGCAGGTCATGGGAATAACGCCGCC 221 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 222 GGATCGCGGGTCGGCATAGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 279 >seq91451 Length=399 Score = 93.3 bits (102), Expect = 2e-17 Identities = 92/118 (78%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||| || ||| || | | |||| ||| |||| ||||| |||| Sbjct 182 GAACCCAAAGACTCGTGGCTTCCCGCACGCTGCCCGGCGGGTCATGGGAATAACGCCGCC 241 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 242 GGATCGCGGGTCGGCATAGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 299 >seq4053 Length=13973 Score = 80.6 bits (88), Expect = 1e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 ||||| |||| |||| | |||||||||||||||||| |||||||||||||||||| Sbjct 13517 ATAACGCCGCCGGATCGCGGGTCGGCATAGTTTACGGTCGGAACTACGACGGTATCTGAT 13576 Query 109 CGTCTTCGA 117 ||||||||| Sbjct 13577 CGTCTTCGA 13585 >seq51 Length=3992100 Score = 71.6 bits (78), Expect = 8e-11 Identities = 53/62 (85%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||| |||| | || ||||||||||||||| | ||||||||||||||| ||||||||| Sbjct 1629199 CGCCGGATCGCAGGTTGGCATAGTTTACGGTCAGAACTACGACGGTATCTAATCGTCTTC 1629258 Query 116 GA 117 || Sbjct 1629259 GA 1629260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277660018020