Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pygocentrus_20nattereri_20[refseq_20GCF_5F001682695.1_202016-07-12] 283,518 sequences; 1,285,352,492 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4053 161 2e-37 >seq4053 Length=13973 Score = 161 bits (178), Expect = 2e-37 Identities = 212/288 (74%), Gaps = 12/288 (4%) Strand=Plus/Minus Query 35 CCGCATGCCCTTCACTGGGTGTGCCGG---GGAGCCAGGA-CTTTTACTTTGAAAAAATT 90 ||| |||||||| ||||||| | | || | | ||| | ||||||||||||||||| Sbjct 13878 CCGGATGCCCTTGGTTGGGTGTCCGCGACAGGGGTCCGGAGCGTTTACTTTGAAAAAATT 13819 Query 91 AGAGTGTTCAAAGCAGGCCTTT-----GCTCGAATACATTAGCATGGAATAATAGAATAG 145 |||||||||||||| |||| | || |||||| | ||| |||||||| |||||| Sbjct 13818 AGAGTGTTCAAAGCGGGCCATCCTCACGCCTGAATACCTGAGCTAGGAATAATGGAATAG 13759 Query 146 GACGTGCGGTTCTATTTT-GTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTC 204 ||| | ||||||||||| || |||||| | ||| | |||||||| ||||| | | Sbjct 13758 GAC-TCTGGTTCTATTTTCGTGGGTTTCCTGAACCAGGGCCATGATTAAGAGGGACGGCC 13700 Query 205 GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTAC 264 ||||| | ||||| | |||||||||||||||||| ||||| || | Sbjct 13699 GGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAA 13640 Query 265 TGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||| || ||||| |||||||||||||||| |||||||||| Sbjct 13639 AGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 13593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912605243264